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comments
2
votes
1
reply
327
views
Computing the neighborhood graph in single cell pipeline
single-cell
knn
updated 11 months ago by
ATpoint
87k • written 11 months ago by
QX
▴ 70
0
votes
2
replies
602
views
Visualize and access gvcf/vcf files
genomics
vcf
updated 7 months ago by
venkat
▴ 10 • written 11 months ago by
QX
▴ 70
0
votes
0
replies
1.1k
views
Comment:
Comment: batch effect correction in 10x genomics single cell sequencing
13 months ago by
QX
▴ 70
0
votes
3
replies
1.1k
views
Comment:
Comment: batch effect correction in 10x genomics single cell sequencing
13 months ago by
QX
▴ 70
0
votes
0
replies
1.3k
views
Comment:
Comment: problem with importing mtx file in scanpy
13 months ago by
QX
▴ 70
0
votes
2
replies
1.3k
views
problem with importing mtx file in scanpy
scanpy
scRNAseq
13 months ago by
QX
▴ 70
0
votes
0
replies
1.3k
views
Answer:
Answer: How can I call somatic CNV in tumor samples with no normal samples?
14 months ago by
QX
▴ 70
1
vote
1
reply
552
views
Variant calling using HaplotypeCaller does not show #FILTER information
Variant-calling
GATK
HaplotypeCaller
WGS
updated 14 months ago by
Ram
44k • written 14 months ago by
QX
▴ 70
0
votes
0
replies
646
views
Comment:
Comment: Execute R command on specific termimal
14 months ago by
QX
▴ 70
5
votes
2
replies
646
views
Execute R command on specific termimal
R
updated 14 months ago by
Ram
44k • written 14 months ago by
QX
▴ 70
0
votes
0
replies
1.3k
views
Comment:
Comment: Downstream analysis with DEseq2 normalization
15 months ago by
QX
▴ 70
0
votes
1
reply
1.3k
views
Comment:
Comment: Downstream analysis with DEseq2 normalization
15 months ago by
QX
▴ 70
0
votes
0
replies
709
views
Comment:
Comment: Normalization function in DEseq2
15 months ago by
QX
▴ 70
3
votes
4
replies
1.3k
views
Downstream analysis with DEseq2 normalization
DEseq2
integration
15 months ago by
QX
▴ 70
4
votes
2
replies
709
views
Normalization function in DEseq2
DEseq2
15 months ago by
QX
▴ 70
0
votes
0
replies
362
views
What is the difference between CNV binning and aligning to gene?
CNV
transcriptomics
15 months ago by
QX
▴ 70
2
votes
1
reply
587
views
Integrate proteomics and scRNA-seq datasets
scRNA-seq
omics
protemics
updated 18 months ago by
bk11
★ 3.0k • written 18 months ago by
QX
▴ 70
1
vote
0
replies
967
views
Comment:
Comment: Integrate transcriptomics and CNV
18 months ago by
QX
▴ 70
0
votes
1
reply
967
views
Comment:
Comment: Integrate transcriptomics and CNV
18 months ago by
QX
▴ 70
3
votes
4
replies
967
views
Integrate transcriptomics and CNV
CNV
omics
18 months ago by
QX
▴ 70
0
votes
0
replies
337
views
Normalization of NGS data to make CNV calls
CNV
Normalization
WGS
19 months ago by
QX
▴ 70
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