Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
4
votes
1
reply
7.9k
views
Answer: A: How can I make a BED file from a VCF file?
4.6 years ago by Brice Sarver ★ 3.8k
1
vote
1
reply
926
views
Answer: A: How to detect different chromosomes from whole genome NGS reads of a fungi?
4.8 years ago by Brice Sarver ★ 3.8k
1
vote
0
replies
1.2k
views
Answer: A: Cannot run HaplotypeCaller in GATK
4.8 years ago by Brice Sarver ★ 3.8k
1
vote
0
replies
3.2k
views
Comment: C: How to Detect Frameshifts in a Protein Alignment
4.8 years ago by Brice Sarver ★ 3.8k
2
votes
1
reply
3.2k
views
Answer: A: How to Detect Frameshifts in a Protein Alignment
4.8 years ago by Brice Sarver ★ 3.8k
0
votes
1
reply
1.2k
views
Comment: C: Good quality control metrics to look out for when someone gives you BAMs
4.8 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
2.5k
views
Answer: A: Bioinformatics Server on AWS
4.8 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
2.1k
views
Comment: C: How can you update position field in a VCF?
4.8 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
1.6k
views
Comment: C: De novo assembly of paired end reads for small separate genes
4.8 years ago by Brice Sarver ★ 3.8k
0
votes
1
reply
1.6k
views
Answer: A: De novo assembly of paired end reads for small separate genes
4.8 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
902
views
Comment: C: Merge VCF INFO tags
4.8 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
1.9k
views
Comment: C: merging vcf files with sample information
4.8 years ago by Brice Sarver ★ 3.8k
0
votes
1
reply
1.9k
views
Answer: A: merging vcf files
4.8 years ago by Brice Sarver ★ 3.8k
2
votes
1
reply
1.3k
views
Answer: A: GFF file for soybean RNAseq analysis
4.8 years ago by Brice Sarver ★ 3.8k
3
votes
1
reply
1.7k
views
Answer: A: Remote blast of SRA database
4.8 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
6.4k
views
Comment: C: /bin/bash/ command not found
4.8 years ago by Brice Sarver ★ 3.8k
1
vote
0
replies
3.8k
views
Answer: A: Is there any tool available to generate ultrametric tree from a rooted phylogene
4.8 years ago by Brice Sarver ★ 3.8k
0
votes
1
reply
6.4k
views
Comment: C: /bin/bash/ command not found
4.8 years ago by Brice Sarver ★ 3.8k
2
votes
0
replies
780
views
Answer: A: How to Read Alleles in Samtools
4.8 years ago by Brice Sarver ★ 3.8k
1
vote
1
reply
2.0k
views
Comment: C: PhD Bioinformatics on GWAS
4.8 years ago by Brice Sarver ★ 3.8k
0
votes
1
reply
2.2k
views
Comment: C: MODEL AVERAGING AND PHYLOGENETICS
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 3.8k
0
votes
1
reply
2.4k
views
Answer: A: Genomes on chromosome level
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 3.8k
1
vote
1
reply
5.4k
views
Comment: C: alignment rate in bowtie2
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 3.8k
2
votes
1
reply
6.6k
views
Answer: A: mapping rate from sam format
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 3.8k
2
votes
0
replies
1.4k
views
Answer: A: How to assign keys and values in a directory by using python
4.9 years ago by Brice Sarver ★ 3.8k
0
votes
1
reply
1.6k
views
Comment: C: P-value of expected/observed proportion
5.0 years ago by Brice Sarver ★ 3.8k
3
votes
2
replies
4.8k
views
Answer: A: Tree input for PAML ancestral state reconstruction
updated 5.0 years ago by 44k • written 8.9 years ago by ★ 3.8k
1
vote
1
reply
2.6k
views
Comment: C: Using the same reads to assemble mitochondria and chloroplast genomes
updated 5.0 years ago by 44k • written 8.9 years ago by ★ 3.8k
2
votes
2
replies
2.6k
views
Answer: A: Using the same reads to assemble mitochondria and chloroplast genomes
updated 5.0 years ago by 44k • written 8.9 years ago by ★ 3.8k
3
votes
1
reply
1.8k
views
Answer: A: Identify fixed differences between population in WGS data (VCF Format)
5.0 years ago by Brice Sarver ★ 3.8k
2
votes
1
reply
2.2k
views
Answer: A: Criteria for merging multiple VCF files
5.0 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
2.8k
views
Comment: C: Is there a way to convert a FASTQ file to FASTA file?
5.0 years ago by Brice Sarver ★ 3.8k
0
votes
1
reply
2.3k
views
Comment: C: Analysing BAM files
5.0 years ago by Brice Sarver ★ 3.8k
3
votes
0
replies
3.2k
views
Answer: A: Interesting things to do with 23andme data
5.0 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
9.9k
views
Answer: A: Applying hard filters for variants
updated 5.0 years ago by 44k • written 9.1 years ago by ★ 3.8k
0
votes
1
reply
8.4k
views
Comment: C: How to Collapse Bedtools reciprocal overlap regions
updated 5.0 years ago by 44k • written 9.1 years ago by ★ 3.8k
0
votes
0
replies
7.6k
views
Comment: C: Calculate Fis (inbreeding coefficient)
5.0 years ago by Brice Sarver ★ 3.8k
1
vote
0
replies
898
views
Comment: C: How to create phylogenetic tree representing the DAPC clusters?
5.0 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
2.7k
views
Answer: A: adegent for Tajima's D:
updated 5.0 years ago by 44k • written 9.1 years ago by ★ 3.8k
0
votes
0
replies
2.2k
views
Answer: A: Split a concatenated MSA and parse out taxa with only missing data
updated 5.0 years ago by 44k • written 9.2 years ago by ★ 3.8k
0
votes
0
replies
3.1k
views
Answer: A: How to write pairwiseAlignment in R in Fasta Format with Headers?
updated 5.1 years ago by 44k • written 9.3 years ago by ★ 3.8k
1
vote
0
replies
1.7k
views
Comment: C: calculating confidence intervals of boostrapped trees
5.1 years ago by Brice Sarver ★ 3.8k
1
vote
0
replies
3.2k
views
Answer: A: Split an interleaved nexus file into different gene alignments - Python
updated 5.1 years ago by 44k • written 9.4 years ago by ★ 3.8k
1
vote
1
reply
4.9k
views
Answer: A: .gstmp extension on .bam files downloaded from google bucket; and EOF marker is
5.1 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
723
views
Comment: C: What might be the cause of database inconsistency
5.1 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
913
views
Answer: A: New Column based on another data frame
5.1 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
1.2k
views
Comment: C: What tool displays DNA to protein translation alignments in a text-style visuali
5.1 years ago by Brice Sarver ★ 3.8k
2
votes
2
replies
1.2k
views
Answer: A: What tool displays DNA to protein translation alignments in a text-style visuali
5.1 years ago by Brice Sarver ★ 3.8k
0
votes
0
replies
1.6k
views
Comment: C: Base count NOT read count - Downsampling to specific number of bases not reads?
5.1 years ago by Brice Sarver ★ 3.8k
0
votes
1
reply
1.6k
views
Comment: C: Base count NOT read count - Downsampling to specific number of bases not reads?
5.1 years ago by Brice Sarver ★ 3.8k
380 results • Page 1 of 8
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6