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Comment: C: Looking for open visualization problems in bioinformatics
updated 4.9 years ago by 44k • written 8.9 years ago by ▴ 430
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1
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4.9k
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Answer: A: Open Source Variant Caller comparable to GATK Haplotype Caller?
updated 5.1 years ago by 44k • written 10.1 years ago by ▴ 430
2
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2
replies
2.2k
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MSA INDEL Realigner
indels realign MSA
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 430
2
votes
1
reply
2.6k
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Split PacBio bax.h5 files
pacbio split baxh5
updated 9.2 years ago by 20 • written 9.3 years ago by ▴ 430
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0
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4.0k
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Comment: C: parsing a multiple sequence alignment file
9.3 years ago by Coryza ▴ 430
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1.7k
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Comment: Comment: pangenome of mycobacterium
updated 2.2 years ago by 44k • written 9.3 years ago by ▴ 430
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1
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4.0k
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Comment: C: parsing a multiple sequence alignment file
9.3 years ago by Coryza ▴ 430
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0
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2.2k
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Comment: Comment: MSA INDEL Realigner
updated 2.2 years ago by 44k • written 9.3 years ago by ▴ 430
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2
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36k
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Comment: Comment: Getting A Vcf File From A Fasta Alignment
updated 2.6 years ago by 44k • written 9.3 years ago by ▴ 430
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0
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3.9k
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Comment: C: Generate a VCF File for Different Reference Sequences
9.3 years ago by Coryza ▴ 430
0
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6
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3.0k
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BLASR/Bowtie2 short alignments
Bowtie2 BLasr
updated 24 months ago by 44k • written 9.4 years ago by ▴ 430
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0
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3.0k
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Comment: C: BLASR/Bowtie2 short alignments
9.4 years ago by Coryza ▴ 430
1
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1
reply
2.3k
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Heterozygous SNPs: Coverage distribution.
SNPs Heterozygous genotyping
updated 23 months ago by 44k • written 9.4 years ago by ▴ 430
0
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1
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3.8k
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Comment: C: Calling SNPs with 1X depth (samtools/bcftools)
9.7 years ago by Coryza ▴ 430
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0
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5.3k
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Comment: C: Biology undergrad taking bioinformatics new to python need HELP with problem!
9.8 years ago by Coryza ▴ 430
0
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1
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5.3k
views
Comment: Comment: Biology undergrad taking bioinformatics new to python need HELP with problem!
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 430
0
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1
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5.3k
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Answer: Answer: Biology undergrad taking bioinformatics new to python need HELP with problem!
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 430
10
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2
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7.9k
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Answer: Answer: VCF header line counting
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 430
0
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0
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5.3k
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Comment: Comment: Long read-alignment + variant calling
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 430
0
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1
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5.3k
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Comment: Comment: Long read-alignment + variant calling
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 430
5
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9
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5.3k
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Long read-alignment + variant calling
long-reads mapping genotyping
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 430
6
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0
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3.2k
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Comment: C: Next Gen seq for Job interview
9.8 years ago by Coryza ▴ 430
0
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1
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2.6k
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Comment: C: Assembly using ALLPATHS-LG: error MergeNeighborhoods2 step
9.8 years ago by Coryza ▴ 430
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0
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1.5k
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Comment: Comment: base and genotype at the same position
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 430
0
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1
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6.0k
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Comment: Comment: Optimum on-target coverage for exome-sequencing
updated 2.8 years ago by 44k • written 10.1 years ago by ▴ 430
0
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1
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6.0k
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Comment: C: Optimum on-target coverage for exome-sequencing
10.1 years ago by Coryza ▴ 430
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0
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3.0k
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Comment: Comment: memory leak using pysam fetch
updated 3.6 years ago by 44k • written 10.1 years ago by ▴ 430
12
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7
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6.6k
views
Remove flags of MarkDuplicates (picard)
duplicates flags picard samtools
updated 3.6 years ago by 44k • written 10.1 years ago by ▴ 430
0
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0
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2.8k
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Comment: C: trinity assemble error , shouldn't have negative delta during EM: -1.5625, round
10.1 years ago by Coryza ▴ 430
0
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0
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6.6k
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Comment: Comment: Remove flags of MarkDuplicates (picard)
updated 3.6 years ago by 44k • written 10.1 years ago by ▴ 430
1
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1
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3.3k
views
Comment: Comment: how to filter at the information of DP(read depth at this position for this samp
updated 3.6 years ago by 44k • written 10.1 years ago by ▴ 430
0
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0
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1.9k
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Comment: C: nucleotide and amino acid sequence comparision
10.1 years ago by Coryza ▴ 430
3
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0
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1.9k
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Answer: A: nucleotide and amino acid sequence comparision
10.1 years ago by Coryza ▴ 430
0
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1
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4.4k
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Comment: C: Illumina Chip-seq run failing Kmer content module in FastQC
10.1 years ago by Coryza ▴ 430
0
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1
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2.8k
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Comment: A: trinity assemble error , shouldn't have negative delta during EM: -1.5625, round
updated 3.7 years ago by 44k • written 10.1 years ago by ▴ 430
2
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0
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2.4k
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Answer: A: I am trying to use cnvnator on lycopersicum and it always generates 0 reads.
updated 3.7 years ago by 44k • written 10.1 years ago by ▴ 430
3
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0
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15k
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Answer: Answer: How to download Gene annotations.gtf file for Drosophila melanogaster
updated 2.8 years ago by 44k • written 10.1 years ago by ▴ 430
1
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1
reply
6.2k
views
Answer: Answer: RSeQC: Problems calling geneBody_coverage.py on a directory
updated 2.8 years ago by 44k • written 10.1 years ago by ▴ 430
0
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1
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3.8k
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Comment: C: Bioinformatics consultant recommendation needed: mouse RNA-Seq, oncology related
10.1 years ago by Coryza ▴ 430
1
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0
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3.8k
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Answer: A: bioinformatics consultant recommendation needed
10.1 years ago by Coryza ▴ 430
1
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0
replies
2.8k
views
Answer: Answer: Looking for a bam file with aligned (error corrected) PacBio reads
updated 2.8 years ago by 44k • written 10.1 years ago by ▴ 430
1
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1
reply
4.1k
views
Answer: Answer: Known SNPs for rice for Base recalibration using GATK
updated 2.8 years ago by 44k • written 10.1 years ago by ▴ 430
1
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1
reply
4.3k
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Answer: Answer: bioinformatics online certificate or a degree at school
updated 2.8 years ago by 44k • written 10.1 years ago by ▴ 430
6
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0
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3.3k
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Answer: A: What should I looking for at the beginning (Master degree in Computer Science)
10.1 years ago by Coryza ▴ 430
1
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0
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3.6k
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Answer: Answer: How to get ortholog sequences.
updated 2.8 years ago by 44k • written 10.2 years ago by ▴ 430
0
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0
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7.6k
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Comment: Comment: De-Novo Genome Assemblies Comparison
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 430
0
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0
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7.6k
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Comment: Comment: De-Novo Genome Assemblies Comparison
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 430
3
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4
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7.6k
views
De-Novo Genome Assemblies Comparison
genome assembly De-novo
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 430
48 results • Page 1 of 1
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