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Comment: Comment: DESeq2 for DE analysis of proteins
3 months ago by Antonio R. Franco ★ 5.1k
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11k
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Comment: Comment: CDS vs cDNA vs transcript for mapping RNA-Seq reads
6 months ago by Antonio R. Franco ★ 5.1k
1
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0
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979
views
Answer: Answer: How to align a genome fasta file from NCBI to a reference genome?
11 months ago by Antonio R. Franco ★ 5.1k
1
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4
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6.9k
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How to order a gff3 file by coordinates
gff3 ordering
updated 13 months ago by ▴ 140 • written 6.7 years ago by ★ 5.1k
1
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0
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935
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Comment: Comment: GO enrichment analysis
19 months ago by Antonio R. Franco ★ 5.1k
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1
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935
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Answer: Answer: GO enrichment analysis
19 months ago by Antonio R. Franco ★ 5.1k
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0
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1.0k
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Answer: Answer: Samtools unmapped reads
20 months ago by Antonio R. Franco ★ 5.1k
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1
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1.1k
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Answer: Answer: Differentially gene expression analysis
21 months ago by Antonio R. Franco ★ 5.1k
1
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1
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1.9k
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Answer: Answer: Scientific Notation to Decimal
21 months ago by Antonio R. Franco ★ 5.1k
0
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0
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991
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Comment: Comment: How does Fasta protein split into columns?
22 months ago by Antonio R. Franco ★ 5.1k
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0
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1.9k
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Answer: Answer: Salmon update on Linux
22 months ago by Antonio R. Franco ★ 5.1k
0
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1
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570
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Comment: Comment: How to create features?
22 months ago by Antonio R. Franco ★ 5.1k
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0
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690
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Answer: Answer: Meta-analysis using 16S rRNA NGS data
23 months ago by Antonio R. Franco ★ 5.1k
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0
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2.0k
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Comment: Comment: Different results in finding human sequences from metagenomes (bowtie2 and Krake
23 months ago by Antonio R. Franco ★ 5.1k
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0
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2.1k
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Comment: Comment: UniProt ID, genes
23 months ago by Antonio R. Franco ★ 5.1k
4
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2
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2.1k
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Answer: Answer: UniProt ID, genes
23 months ago by Antonio R. Franco ★ 5.1k
0
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0
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811
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Comment: Comment: Primer Design
23 months ago by Antonio R. Franco ★ 5.1k
1
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1
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811
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Answer: Answer: Primer Design
23 months ago by Antonio R. Franco ★ 5.1k
2
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0
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1.5k
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Answer: Answer: is higher logFC always good?
24 months ago by Antonio R. Franco ★ 5.1k
1
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0
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847
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Answer: Answer: GO ontology- no biological processes found
24 months ago by Antonio R. Franco ★ 5.1k
0
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0
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1.0k
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Comment: Comment: Best practices and programs tu run a WGS genetic analysis
24 months ago by Antonio R. Franco ★ 5.1k
0
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0
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1.0k
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Comment: Comment: Best practices and programs tu run a WGS genetic analysis
2.1 years ago by Antonio R. Franco ★ 5.1k
6
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5
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1.0k
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Best practices and programs tu run a WGS genetic analysis
Genetic WGS analysis
24 months ago by Antonio R. Franco ★ 5.1k
0
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0
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1.0k
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Answer: Answer: Best practices and programs tu run a WGS genetic analysis
2.1 years ago by Antonio R. Franco ★ 5.1k
0
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1
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1.8k
views
Comment: Comment: Fasta headers column spilt or selection
2.1 years ago by Antonio R. Franco ★ 5.1k
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0
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1.6k
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Comment: Comment: How to extracting rows that have the same values in all columns in Linux ?
2.1 years ago by Antonio R. Franco ★ 5.1k
0
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1
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1.6k
views
Answer: Answer: How to extracting rows that have the same values in all columns in Linux ?
2.1 years ago by Antonio R. Franco ★ 5.1k
0
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0
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934
views
Comment: Comment: How to produce count matrix with multiple run files?
2.2 years ago by Antonio R. Franco ★ 5.1k
0
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1
reply
934
views
Answer: Answer: How to produce count matrix with multiple run files?
2.2 years ago by Antonio R. Franco ★ 5.1k
0
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1
reply
809
views
Answer: Answer: Stringtie skips some reference genes
2.2 years ago by Antonio R. Franco ★ 5.1k
0
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0
replies
1.4k
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Answer: Answer: Extract certain fasta sequnce from multi fasta file
2.2 years ago by Antonio R. Franco ★ 5.1k
0
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1
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1.7k
views
Comment: Comment: How to do GO enrichment analysis for Klebsiella pneumonia?
2.3 years ago by Antonio R. Franco ★ 5.1k
1
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0
replies
1.1k
views
Answer: Answer: Fastq: how can I check if they are from DNA or RNAseq data?
2.3 years ago by Antonio R. Franco ★ 5.1k
0
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0
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15k
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Comment: Comment: Which strand specific option need to be used with HISAT2?
22 months ago by Antonio R. Franco ★ 5.1k
1
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0
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1.8k
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Comment: Comment: setting up Kallisto software
2.3 years ago by Antonio R. Franco ★ 5.1k
0
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0
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1.5k
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Comment: Comment: Getting the best of RNA-Seq
2.3 years ago by Antonio R. Franco ★ 5.1k
0
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0
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1.5k
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Comment: Comment: Getting the best of RNA-Seq
2.3 years ago by Antonio R. Franco ★ 5.1k
0
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0
replies
1.5k
views
Comment: Comment: Getting the best of RNA-Seq
2.3 years ago by Antonio R. Franco ★ 5.1k
2
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6
replies
1.5k
views
Forum: Getting the best of RNA-Seq
RNA-Seq isoform gene expression
2.3 years ago by Antonio R. Franco ★ 5.1k
0
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0
replies
958
views
Answer: Answer: Software/packages for analyzing differential isoforms from RNA-seq data?
2.4 years ago by Antonio R. Franco ★ 5.1k
0
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1
reply
2.1k
views
Comment: Comment: Issues with newer Kallisto versions (aka 0.46.1)
2.4 years ago by Antonio R. Franco ★ 5.1k
0
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2
replies
2.1k
views
Comment: Comment: Issues with newer Kallisto versions (aka 0.46.1)
2.4 years ago by Antonio R. Franco ★ 5.1k
3
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0
replies
2.1k
views
Comment: Comment: Issues with newer Kallisto versions (aka 0.46.1)
2.4 years ago by Antonio R. Franco ★ 5.1k
11
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10
replies
2.1k
views
Issues with newer Kallisto versions (aka 0.46.1)
Kallisto
updated 2.4 years ago by ★ 6.9k • written 2.4 years ago by ★ 5.1k
0
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0
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2.0k
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Comment: Comment: DESeq2 installation error
2.4 years ago by Antonio R. Franco ★ 5.1k
0
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1
reply
1.4k
views
Comment: Comment: Assesing contaminants sequences from long genomic contigs
2.5 years ago by Antonio R. Franco ★ 5.1k
0
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0
replies
1.4k
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Comment: Comment: Assesing contaminants sequences from long genomic contigs
2.5 years ago by Antonio R. Franco ★ 5.1k
0
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1
reply
1.4k
views
Comment: Comment: Assesing contaminants sequences from long genomic contigs
2.5 years ago by Antonio R. Franco ★ 5.1k
0
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2
replies
1.4k
views
Comment: Comment: Assesing contaminants sequences from long genomic contigs
2.5 years ago by Antonio R. Franco ★ 5.1k
5
votes
9
replies
1.4k
views
Assesing contaminants sequences from long genomic contigs
genomic PacBio sequences contaminants
updated 2.5 years ago by 146k • written 2.5 years ago by ★ 5.1k
683 results • Page 1 of 14
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