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Plotting the control-FREEC data
control-FREEC CNVs
updated 9 weeks ago by ▴ 20 • written 4 months ago by • 0
0
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1
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1.0k
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Comment: Comment: How to generate an oncoplot with most frequently mutated genes using maftools wi
5 months ago by sainavyav22 • 0
0
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1
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1.0k
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Comment: Comment: How to generate an oncoplot with most frequently mutated genes using maftools wi
5 months ago by sainavyav22 • 0
0
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1
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1.0k
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Comment: Comment: How to generate an oncoplot with most frequently mutated genes using maftools wi
updated 5 months ago by 44k • written 5 months ago by • 0
0
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0
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438
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Comment: Comment: Help with CNA analysis using control-FREEC
5 months ago by sainavyav22 • 0
0
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1
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438
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Comment: Comment: Help with CNA analysis using control-FREEC
5 months ago by sainavyav22 • 0
0
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4
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438
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Help with CNA analysis using control-FREEC
CNA control-FREEC
5 months ago by sainavyav22 • 0
0
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7
replies
1.0k
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How to generate an oncoplot with most frequently mutated genes using maftools with annovar annotated output files
oncoplot Maftools Annovar
updated 5 months ago by 44k • written 6 months ago by • 0
0
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0
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397
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Comment: Comment: How to generate an Upset plot in R to plot the shared variants between cell free
6 months ago by sainavyav22 • 0
0
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2
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397
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How to generate an Upset plot in R to plot the shared variants between cell free DNA samples
r Upset
6 months ago by sainavyav22 • 0
0
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0
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249
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Use of ichor CNA
Dog CNA genome
6 months ago by sainavyav22 • 0
0
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0
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408
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Comment: Comment: Presence of unknown sites in ANNOVAR output file
updated 6 months ago by 44k • written 6 months ago by • 0
0
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2
replies
408
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Presence of unknown sites in ANNOVAR output file
ANNOVAR
updated 6 months ago by 44k • written 6 months ago by • 0
0
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0
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474
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Comment: Comment: Help with generating annotation database for dog genome to use in ANNOVAR for v
6 months ago by sainavyav22 • 0
0
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0
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398
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Comment: Comment: Help with Base quality Score Recalibration (BQSR) using GATK
7 months ago by sainavyav22 • 0
0
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2
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398
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Help with Base quality Score Recalibration (BQSR) using GATK
GATK BQSR
7 months ago by sainavyav22 • 0
0
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0
replies
250
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How to extract the mutations specific to cancer after variant annotation
variant-annotation
updated 7 months ago by 44k • written 7 months ago by • 0
0
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2
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474
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Help with generating annotation database for dog genome to use in ANNOVAR for variant annotation of dog tumor sequences
ANNOVAR
6 months ago by sainavyav22 • 0
0
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1
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1.3k
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Comment: Comment: Reference Guided genome assembly
9 months ago by sainavyav22 • 0
0
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1
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1.3k
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Comment: Comment: Reference Guided genome assembly
9 months ago by sainavyav22 • 0
0
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0
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1.3k
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Comment: Comment: Reference Guided genome assembly
9 months ago by sainavyav22 • 0
2
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11
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1.3k
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Reference Guided genome assembly
tabix
updated 9 months ago by 55k • written 9 months ago by • 0
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3
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1.3k
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Comment: Comment: Reference Guided genome assembly
updated 9 months ago by 44k • written 9 months ago by • 0
0
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0
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492
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Comment: Comment: Help with ABySS use
10 months ago by sainavyav22 • 0
0
votes
1
reply
492
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Comment: Comment: Help with ABySS use
10 months ago by sainavyav22 • 0
0
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4
replies
492
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Help with ABySS use
ABySS
10 months ago by sainavyav22 • 0
0
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0
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647
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Comment: Comment: Error in running Abyss assembler for chicken genome assembly
10 months ago by sainavyav22 • 0
0
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0
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734
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Comment: Comment: Trimmomatic - To trim the low quality reads
10 months ago by sainavyav22 • 0
0
votes
1
reply
734
views
Comment: Comment: Trimmomatic - To trim the low quality reads
10 months ago by sainavyav22 • 0
0
votes
1
reply
734
views
Comment: Comment: Trimmomatic - To trim the low quality reads
updated 10 months ago by 147k • written 10 months ago by • 0
0
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6
replies
734
views
Trimmomatic - To trim the low quality reads
Trimmomatic
10 months ago by sainavyav22 • 0
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