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10
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3.4k
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Bedmethyl file format
bedmethyl methylation
updated 3 months ago by • 0 • written 14 months ago by ▴ 20
0
votes
0
replies
213
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Is there a database with the mode of inheritance for diseases?
diagnostics genotyping allelotyping
7 months ago by njornet ▴ 20
0
votes
1
reply
721
views
Comment: Comment: Where can I download a BED file with exonic regions?
7 months ago by njornet ▴ 20
2
votes
4
replies
721
views
Where can I download a BED file with exonic regions?
exome bed
updated 7 months ago by 166k • written 7 months ago by ▴ 20
0
votes
1
reply
830
views
Comment: Comment: What does fully overlapping supplementary alignments mean?
8 months ago by njornet ▴ 20
0
votes
3
replies
830
views
What does fully overlapping supplementary alignments mean?
Alignment nanopore minimap2
updated 8 months ago by 55k • written 8 months ago by ▴ 20
0
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0
replies
348
views
Is this phasing result normal?
haplotyping sequencing phasing nanopore
9 months ago by njornet ▴ 20
0
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0
replies
669
views
Comment: Comment: Restrictive alignment with minimap2
9 months ago by njornet ▴ 20
0
votes
2
replies
669
views
Restrictive alignment with minimap2
nanopore alignment minimap2
9 months ago by njornet ▴ 20
0
votes
4
replies
827
views
Use alignment as reference genome to separate DNA from a mixed sample
human sequencing nanopore alignment
updated 10 months ago by 152k • written 10 months ago by ▴ 20
0
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1
reply
827
views
Comment: Comment: Use alignment as reference genome to separate DNA from a mixed sample
10 months ago by njornet ▴ 20
0
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0
replies
2.5k
views
Comment: Comment: Duplicated reads (IDs) from nanopore sequencing
13 months ago by njornet ▴ 20
0
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2
replies
2.5k
views
Comment: Comment: Duplicated reads (IDs) from nanopore sequencing
13 months ago by njornet ▴ 20
0
votes
9
replies
2.5k
views
Duplicated reads (IDs) from nanopore sequencing
bam nanopore sequencing
13 months ago by njornet ▴ 20
0
votes
0
replies
591
views
Comment: Comment: Phasing a mixture of two individuals' DNA with long reads
13 months ago by njornet ▴ 20
0
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2
replies
591
views
Phasing a mixture of two individuals' DNA with long reads
long-reads phasing
13 months ago by njornet ▴ 20
0
votes
1
reply
610
views
Comment: Comment: Software to separate reads from different individuals
13 months ago by njornet ▴ 20
0
votes
3
replies
610
views
Software to separate reads from different individuals
software development nanopore
updated 13 months ago by 152k • written 13 months ago by ▴ 20
0
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0
replies
1.0k
views
Comment: Comment: Should I remove unlocalized scaffols in reference genome before alignment?
13 months ago by njornet ▴ 20
0
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0
replies
1.0k
views
Comment: Comment: Should I remove unlocalized scaffols in reference genome before alignment?
14 months ago by njornet ▴ 20
0
votes
5
replies
1.0k
views
Should I remove unlocalized scaffols in reference genome before alignment?
qualimap alignment minimap2 GRCh38 assembly
13 months ago by njornet ▴ 20
4
votes
2
replies
1.1k
views
Assume "yes" as the answer to any prompts with bioconda
docker container bioconda
updated 14 months ago by 9.2k • written 14 months ago by ▴ 20
2
votes
2
replies
825
views
Problem with Sniffles pipeline and SV calling help
SV sniffles StructuralVariant
updated 14 months ago by 152k • written 14 months ago by ▴ 20
0
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1
reply
4.1k
views
Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
14 months ago by njornet ▴ 20
0
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1
reply
4.1k
views
Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
14 months ago by njornet ▴ 20
0
votes
0
replies
646
views
Comment: Comment: fmols for nanopore library loading
14 months ago by njornet ▴ 20
0
votes
0
replies
907
views
Comment: Comment: Adaptive sampling for whole chromosomes
14 months ago by njornet ▴ 20
0
votes
1
reply
4.1k
views
Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
14 months ago by njornet ▴ 20
0
votes
2
replies
646
views
fmols for nanopore library loading
nanopore sequencing libraryprep fmol LSK114
updated 14 months ago by 152k • written 14 months ago by ▴ 20
0
votes
1
reply
907
views
Comment: Comment: Adaptive sampling for whole chromosomes
14 months ago by njornet ▴ 20
0
votes
4
replies
907
views
Adaptive sampling for whole chromosomes
T2T Nanopore AdaptiveSampling aneuploidy centromeres
14 months ago by njornet ▴ 20
1
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1
reply
4.1k
views
Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
14 months ago by njornet ▴ 20
0
votes
0
replies
4.1k
views
Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
14 months ago by njornet ▴ 20
5
votes
14
replies
4.1k
views
Not getting any modification calls in nanopore reads with dorado basecaller
mofications dorado basecalling nanopore methylation
updated 14 months ago by 152k • written 15 months ago by ▴ 20
0
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1
reply
4.1k
views
Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
15 months ago by njornet ▴ 20
0
votes
0
replies
752
views
Comment: Comment: Weird Basecalled reads PHRED quality plot from pycoQC
15 months ago by njornet ▴ 20
0
votes
2
replies
752
views
Weird Basecalled reads PHRED quality plot from pycoQC
pycoQC nanopore sequencing
15 months ago by njornet ▴ 20
0
votes
0
replies
404
views
SAMstat mapping quality report MAPQ gt vs MAPQ lt
Sequencing mapping samstat
15 months ago by njornet ▴ 20
0
votes
0
replies
1.4k
views
Comment: Comment: Target deletions with adaptive sampling
15 months ago by njornet ▴ 20
1
vote
2
replies
1.4k
views
Comment: Comment: Target deletions with adaptive sampling
15 months ago by njornet ▴ 20
3
votes
6
replies
1.4k
views
Target deletions with adaptive sampling
microdeletions nanopore AdaptiveSampling
15 months ago by njornet ▴ 20
0
votes
0
replies
758
views
Comment: Comment: Considerations for nanopore adaptive sampling enrichment designing
15 months ago by njornet ▴ 20
1
vote
2
replies
758
views
Considerations for nanopore adaptive sampling enrichment designing
adaptive-sampling nanopore
15 months ago by njornet ▴ 20
1
vote
2
replies
2.9k
views
Align dorado output to reference
minimap2 bam nanopore dorado
updated 15 months ago by 7.6k • written 15 months ago by ▴ 20
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