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116
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Is there a database with the mode of inheritance for diseases?
diagnostics genotyping allelotyping
11 days ago by njornet ▴ 20
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289
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Comment: Comment: Where can I download a BED file with exonic regions?
12 days ago by njornet ▴ 20
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4
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289
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Where can I download a BED file with exonic regions?
exome bed
updated 12 days ago by 164k • written 12 days ago by ▴ 20
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1
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314
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Comment: Comment: What does fully overlapping supplementary alignments mean?
5 weeks ago by njornet ▴ 20
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3
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314
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What does fully overlapping supplementary alignments mean?
Alignment nanopore minimap2
updated 5 weeks ago by 55k • written 5 weeks ago by ▴ 20
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0
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229
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Is this phasing result normal?
haplotyping sequencing phasing nanopore
9 weeks ago by njornet ▴ 20
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0
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309
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Comment: Comment: Restrictive alignment with minimap2
12 weeks ago by njornet ▴ 20
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2
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309
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Restrictive alignment with minimap2
nanopore alignment minimap2
12 weeks ago by njornet ▴ 20
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4
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464
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Use alignment as reference genome to separate DNA from a mixed sample
human sequencing nanopore alignment
updated 3 months ago by 147k • written 3 months ago by ▴ 20
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1
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464
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Comment: Comment: Use alignment as reference genome to separate DNA from a mixed sample
3 months ago by njornet ▴ 20
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0
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1.2k
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Comment: Comment: Duplicated reads (IDs) from nanopore sequencing
6 months ago by njornet ▴ 20
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2
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1.2k
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Comment: Comment: Duplicated reads (IDs) from nanopore sequencing
6 months ago by njornet ▴ 20
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9
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1.2k
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Duplicated reads (IDs) from nanopore sequencing
bam nanopore sequencing
6 months ago by njornet ▴ 20
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0
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377
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Comment: Comment: Phasing a mixture of two individuals' DNA with long reads
6 months ago by njornet ▴ 20
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2
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377
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Phasing a mixture of two individuals' DNA with long reads
long-reads phasing
6 months ago by njornet ▴ 20
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1
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412
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Comment: Comment: Software to separate reads from different individuals
6 months ago by njornet ▴ 20
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3
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412
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Software to separate reads from different individuals
software development nanopore
updated 6 months ago by 147k • written 6 months ago by ▴ 20
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681
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Comment: Comment: Should I remove unlocalized scaffols in reference genome before alignment?
7 months ago by njornet ▴ 20
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0
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681
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Comment: Comment: Should I remove unlocalized scaffols in reference genome before alignment?
7 months ago by njornet ▴ 20
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5
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681
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Should I remove unlocalized scaffols in reference genome before alignment?
qualimap alignment minimap2 GRCh38 assembly
7 months ago by njornet ▴ 20
4
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2
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617
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Assume "yes" as the answer to any prompts with bioconda
docker container bioconda
updated 7 months ago by 8.9k • written 7 months ago by ▴ 20
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2
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1.1k
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Bedmethyl file format
bedmethyl methylation
updated 7 months ago by 147k • written 7 months ago by ▴ 20
2
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2
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503
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Problem with Sniffles pipeline and SV calling help
SV sniffles StructuralVariant
updated 7 months ago by 147k • written 7 months ago by ▴ 20
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1
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2.3k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
7 months ago by njornet ▴ 20
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1
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2.3k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
7 months ago by njornet ▴ 20
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0
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386
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Comment: Comment: fmols for nanopore library loading
7 months ago by njornet ▴ 20
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0
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564
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Comment: Comment: Adaptive sampling for whole chromosomes
7 months ago by njornet ▴ 20
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1
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2.3k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
7 months ago by njornet ▴ 20
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2
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386
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fmols for nanopore library loading
nanopore sequencing libraryprep fmol LSK114
updated 7 months ago by 147k • written 7 months ago by ▴ 20
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1
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564
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Comment: Comment: Adaptive sampling for whole chromosomes
7 months ago by njornet ▴ 20
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4
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564
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Adaptive sampling for whole chromosomes
T2T Nanopore AdaptiveSampling aneuploidy centromeres
7 months ago by njornet ▴ 20
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1
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2.3k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
7 months ago by njornet ▴ 20
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0
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2.3k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
7 months ago by njornet ▴ 20
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14
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2.3k
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Not getting any modification calls in nanopore reads with dorado basecaller
mofications dorado basecalling nanopore methylation
updated 7 months ago by 147k • written 8 months ago by ▴ 20
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2.3k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
8 months ago by njornet ▴ 20
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0
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487
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Comment: Comment: Weird Basecalled reads PHRED quality plot from pycoQC
8 months ago by njornet ▴ 20
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2
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487
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Weird Basecalled reads PHRED quality plot from pycoQC
pycoQC nanopore sequencing
8 months ago by njornet ▴ 20
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0
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248
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SAMstat mapping quality report MAPQ gt vs MAPQ lt
Sequencing mapping samstat
8 months ago by njornet ▴ 20
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0
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887
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Comment: Comment: Target deletions with adaptive sampling
8 months ago by njornet ▴ 20
1
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2
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887
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Comment: Comment: Target deletions with adaptive sampling
8 months ago by njornet ▴ 20
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6
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887
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Target deletions with adaptive sampling
microdeletions nanopore AdaptiveSampling
8 months ago by njornet ▴ 20
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0
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465
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Comment: Comment: Considerations for nanopore adaptive sampling enrichment designing
8 months ago by njornet ▴ 20
1
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2
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465
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Considerations for nanopore adaptive sampling enrichment designing
adaptive-sampling nanopore
8 months ago by njornet ▴ 20
1
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2
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1.7k
views
Align dorado output to reference
minimap2 bam nanopore dorado
updated 8 months ago by 7.0k • written 8 months ago by ▴ 20
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