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0
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0
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1.2k
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Comment: Comment: Haplotype specific alleles
23 months ago by Korsocius ▴ 270
2
votes
3
replies
1.2k
views
Haplotype specific alleles
freuqency bam haplotype
23 months ago by Korsocius ▴ 270
5
votes
2
replies
797
views
find function with samtools - convert format to all subfolders
cram bam samtools
updated 22 months ago by 45k • written 2.9 years ago by ▴ 270
0
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0
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14k
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Comment: Comment: List all available databases for ANNOVAR
4.4 years ago by Korsocius ▴ 270
0
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1
reply
67k
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Comment: C: How To Sort Bed Format File
updated 5.4 years ago by 45k • written 7.9 years ago by ▴ 270
16
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1
reply
67k
views
Answer: A: How To Sort Bed Format File
updated 5.7 years ago by 12k • written 10.2 years ago by ▴ 270
0
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0
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2.2k
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Comment: A: Error in SAM to BAM conversion
5.8 years ago by Korsocius ▴ 270
3
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4
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3.3k
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Parallel for bwa mem - problem with -R argument for ID and SM
parallel alignment bwa
updated 6.1 years ago by 87k • written 7.1 years ago by ▴ 270
0
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1
reply
4.5k
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Comment: C: How to combine multiple tools to detct SVs in WES data
7.1 years ago by Korsocius ▴ 270
0
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0
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3.3k
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Comment: C: Parallel for bwa mem - problem with -R argument for ID and SM
7.1 years ago by Korsocius ▴ 270
0
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0
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7.5k
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Comment: C: Using parallel with Mem
7.1 years ago by Korsocius ▴ 270
0
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1
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7.5k
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Answer: A: Using parallel with Mem
7.1 years ago by Korsocius ▴ 270
0
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0
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3.6k
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Comment: C: Is it possible to run variant calling software in parallel, are there any Shell
7.2 years ago by Korsocius ▴ 270
0
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0
replies
7.7k
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Comment: C: Awk command for fastq read length and number of reads?
7.2 years ago by Korsocius ▴ 270
0
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0
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8.1k
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Answer: A: Software To Call Somatic Indels?
7.2 years ago by Korsocius ▴ 270
0
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0
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3.6k
views
Comment: C: Is it possible to run variant calling software in parallel, are there any Shell
7.2 years ago by Korsocius ▴ 270
0
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1
reply
3.6k
views
Comment: C: Is it possible to run variant calling software in parallel, are there any Shell
7.2 years ago by Korsocius ▴ 270
1
vote
5
replies
1.7k
views
Merge series and recognize end of it - AWK
AWK Merge
updated 7.2 years ago by 36k • written 7.2 years ago by ▴ 270
0
votes
1
reply
1.7k
views
Comment: C: Merge series and recognize end of it - AWK
7.2 years ago by Korsocius ▴ 270
4
votes
1
reply
17k
views
Answer: A: How to remove Bad Nucleotides represented by "N" from FASTA file by using UNIX?
7.3 years ago by Korsocius ▴ 270
2
votes
2
replies
1.7k
views
Paralellize samtools piped with awk
parallel samtools
7.4 years ago by Korsocius ▴ 270
0
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0
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5.7k
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Comment: C: How to get coordinates from HGVSc, HGVSp and gene name
7.5 years ago by Korsocius ▴ 270
3
votes
4
replies
5.7k
views
How to get coordinates from HGVSc, HGVSp and gene name
next-gen hgvs
updated 7.5 years ago by 24k • written 7.5 years ago by ▴ 270
0
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0
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1.9k
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Comment: C: Change signification in bam for duplicates
8.3 years ago by Korsocius ▴ 270
2
votes
2
replies
1.9k
views
Change signification in bam for duplicates
sam bam duplicates
updated 8.3 years ago by 105k • written 8.3 years ago by ▴ 270
0
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0
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2.9k
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Comment: C: Counting summary info (count of reads and average GC) for segment with specific
8.3 years ago by Korsocius ▴ 270
0
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1
reply
2.9k
views
Comment: C: Counting summary info (count of reads and average GC) for segment with specific
8.3 years ago by Korsocius ▴ 270
0
votes
1
reply
2.9k
views
Comment: C: Counting summary info (count of reads and average GC) for segment with specific
8.3 years ago by Korsocius ▴ 270
0
votes
6
replies
2.9k
views
Counting summary info (count of reads and average GC) for segment with specific length
next-gen genome
updated 8.3 years ago by 7.1k • written 8.3 years ago by ▴ 270
1
vote
0
replies
62k
views
Comment: C: How Can I Know The Length Of Mapped Reads From Bam File?
8.6 years ago by Korsocius ▴ 270
0
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0
replies
8.0k
views
Answer: A: Homozygous Ref Calls And No Calls
8.7 years ago by Korsocius ▴ 270
0
votes
0
replies
1.8k
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Fusion gene partner
DNA
8.8 years ago by Korsocius ▴ 270
0
votes
4
replies
3.0k
views
ASCII conversion from bam file
ASCII Quality
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 270
0
votes
1
reply
18k
views
Comment: C: How To Create A Venn Diagram Of Sample1.Vcf, Sample2.Vcf And Sample1&2(Union).Vc
9.5 years ago by Korsocius ▴ 270
5
votes
5
replies
4.0k
views
Count of GC in row, but not from N bases
GC
updated 2.3 years ago by 45k • written 9.9 years ago by ▴ 270
0
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1
reply
4.0k
views
Comment: C: Count of GC in row, but not from N bases
9.9 years ago by Korsocius ▴ 270
0
votes
0
replies
4.0k
views
Comment: Comment: Count of GC in row, but not from N bases
updated 2.3 years ago by 45k • written 9.9 years ago by ▴ 270
1
vote
0
replies
5.0k
views
Comment: C: BEDTools genomecov command and input file isse
10.0 years ago by Korsocius ▴ 270
0
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0
replies
2.4k
views
Comment: Comment: bedtools probelm of syntax
updated 3.0 years ago by 45k • written 10.2 years ago by ▴ 270
0
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1
reply
2.4k
views
Comment: Comment: bedtools probelm of syntax
updated 3.0 years ago by 45k • written 10.2 years ago by ▴ 270
4
votes
4
replies
2.4k
views
bedtools probelm of syntax
map bedtools DNA
updated 3.0 years ago by 45k • written 10.2 years ago by ▴ 270
1
vote
1
reply
2.3k
views
Comment: Comment: R plot with different point in graph
updated 3.0 years ago by 45k • written 10.3 years ago by ▴ 270
4
votes
3
replies
2.3k
views
R plot with different point in graph
plot R
updated 3.0 years ago by 45k • written 10.3 years ago by ▴ 270
0
votes
0
replies
14k
views
Comment: C: Calculating GC content from BAM file by BED file
10.3 years ago by Korsocius ▴ 270
0
votes
1
reply
14k
views
Comment: C: Calculating GC content from BAM file by BED file
10.3 years ago by Korsocius ▴ 270
0
votes
0
replies
3.0k
views
Comment: C: ASCII conversion from bam file
10.4 years ago by Korsocius ▴ 270
0
votes
1
reply
3.0k
views
Comment: Comment: ASCII conversion from bam file
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 270
20
votes
16
replies
5.4k
views
6 follow
Parallel for shell script with different output
shell parallel
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 270
0
votes
1
reply
5.4k
views
Comment: C: Parallel for shell script with different output
10.4 years ago by Korsocius ▴ 270
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