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Deciding Between TOIL Processed Data (Xena) vs. TCGA Biolinks Data for DE Analysis
DESeq TCGA Xena RNA-Seq BIOLINKS
5 months ago by lyan125 ▴ 10
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Comment: Comment: Which data to choose for correlation examination
6 months ago by lyan125 ▴ 10
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Comment: Comment: Which data to choose for correlation examination
6 months ago by lyan125 ▴ 10
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Which data to choose for correlation examination
correlation WGCNA TPM batch spearman
updated 4 months ago by ★ 1.3k • written 6 months ago by ▴ 10
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713
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High inconsistency between edgeR and DESeq2
log-ratio edgeR GLM DESeq2
updated 9 months ago by ★ 3.1k • written 9 months ago by ▴ 10
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2.7k
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DEseq2 on expected counts
DEseq2 Normalize raw-counts
updated 9 months ago by 89k • written 10 months ago by ▴ 10
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Comment: Comment: DEseq2 on expected counts
10 months ago by lyan125 ▴ 10
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Comment: Comment: DEseq2 on expected counts
10 months ago by lyan125 ▴ 10
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Comment: Comment: DEseq2 on expected counts
10 months ago by lyan125 ▴ 10
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Comment: Comment: DEseq2 on expected counts
10 months ago by lyan125 ▴ 10
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Comment: Comment: DEseq2 on expected counts
10 months ago by lyan125 ▴ 10
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Comment: Comment: DEseq2 on expected counts
10 months ago by lyan125 ▴ 10
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