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Comment: Comment: How modified GTF file into a BED file with chromosome aware format?
4 days ago by michael.ante ★ 3.9k
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238
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Comment: Comment: Annotating bacterial intergenic regions
8 days ago by michael.ante ★ 3.9k
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1
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592
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Comment: Comment: Transcript coverage 3' bias. Is it really that determining?
10 days ago by michael.ante ★ 3.9k
1
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1
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592
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Comment: Comment: Transcript coverage 3' bias. Is it really that determining?
10 days ago by michael.ante ★ 3.9k
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1
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592
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Answer: Answer: Transcript coverage 3' bias. Is it really that determining?
10 days ago by michael.ante ★ 3.9k
1
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1
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403
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Comment: Comment: Wilcox or T-test with percentages in R
5 weeks ago by michael.ante ★ 3.9k
1
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1
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403
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Answer: Answer: Wilcox or T-test with percentages in R
5 weeks ago by michael.ante ★ 3.9k
1
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1
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730
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Answer: Answer: Create a fasta and gtf file
6 weeks ago by michael.ante ★ 3.9k
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0
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391
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Answer: Answer: Getting cds files from ncbi using accession numbers
6 weeks ago by michael.ante ★ 3.9k
1
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0
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359
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Answer: Answer: DeNovo Assembly - Assigning gene description
7 weeks ago by michael.ante ★ 3.9k
2
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1
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397
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Comment: Comment: gtf files for various organism in ucsc
9 weeks ago by michael.ante ★ 3.9k
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1
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397
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Comment: Comment: gtf files for various organism in ucsc
9 weeks ago by michael.ante ★ 3.9k
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0
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369
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Comment: Comment: Error with filterbytile.sh from BBMap suite
11 weeks ago by michael.ante ★ 3.9k
1
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1
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562
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Comment: Comment: can someone please explain the DAPARS output?
4 months ago by michael.ante ★ 3.9k
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0
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819
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Comment: Comment: Fragmented BUSCOs of genome assemblies - How to improve scores?
4 months ago by michael.ante ★ 3.9k
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0
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423
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Answer: Answer: How can I convert a .sqn file to .gbk
4 months ago by michael.ante ★ 3.9k
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0
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437
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Answer: Answer: Unable to remove duplicate sequences
4 months ago by michael.ante ★ 3.9k
1
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1
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562
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Answer: Answer: can someone please explain the DAPARS output?
4 months ago by michael.ante ★ 3.9k
0
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0
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437
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Comment: Comment: Unable to remove duplicate sequences
4 months ago by michael.ante ★ 3.9k
1
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0
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520
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Comment: Comment: Affymetrix microarray
4 months ago by michael.ante ★ 3.9k
0
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0
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694
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Comment: Comment: using parallel on samtools view
4 months ago by michael.ante ★ 3.9k
0
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1
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694
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Comment: Comment: using parallel on samtools view
4 months ago by michael.ante ★ 3.9k
1
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1
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694
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Comment: Comment: using parallel on samtools view
4 months ago by michael.ante ★ 3.9k
1
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0
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3.4k
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Answer: Answer: Which alignment for whole bacterial genomes for phylogenetic tree?
14 months ago by michael.ante ★ 3.9k
0
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0
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826
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Comment: Comment: HTseq no features
21 months ago by michael.ante ★ 3.9k
1
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0
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1.3k
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Comment: Comment: RNA seq for different tissues samples
2.1 years ago by michael.ante ★ 3.9k
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1
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1.1k
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Comment: Comment: finding overlapping motifs to increase length of motif
2.1 years ago by michael.ante ★ 3.9k
0
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0
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547
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Comment: Comment: Quantify gene expression using flanking sequences
2.3 years ago by michael.ante ★ 3.9k
1
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0
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2.4k
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Comment: Comment: Searching for mRNA ending with a specific 3' pattern in NON-poly-A RNASeq data.
3.3 years ago by michael.ante ★ 3.9k
0
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1
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2.6k
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Comment: C: How to extract sequences from multiple fastq files based on part of the header?
3.8 years ago by michael.ante ★ 3.9k
1
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0
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961
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Comment: C: How to interpret one region of gene with much higher RNASeq coverage than other
3.8 years ago by michael.ante ★ 3.9k
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0
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1.8k
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Comment: C: How to identify 3'UTR region?
4.9 years ago by michael.ante ★ 3.9k
0
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0
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1.9k
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Comment: C: featureCounts log: "WARNING contig is not found in the provided genome file!"
4.9 years ago by michael.ante ★ 3.9k
0
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1
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2.9k
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Answer: A: How to interpret the differences of read counts using htseq and feature counts?
4.9 years ago by michael.ante ★ 3.9k
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0
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1.3k
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Comment: C: Would curated pathway gene set better being weighted than being binary
4.9 years ago by michael.ante ★ 3.9k
0
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1
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1.3k
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Comment: C: Would curated pathway gene set better being weighted than being binary
4.9 years ago by michael.ante ★ 3.9k
0
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0
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2.1k
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Comment: C: Extract sequences from fastA files based on csv chart in R
5.0 years ago by michael.ante ★ 3.9k
0
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1
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2.1k
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Comment: C: Extract sequences from fastA files based on csv chart
5.0 years ago by michael.ante ★ 3.9k
0
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0
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1.9k
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Comment: C: Error in piRNA gtf file while featurecounts step in STAR aligner?
5.0 years ago by michael.ante ★ 3.9k
0
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1
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1.8k
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Comment: C: STAR error (segmentation fault) in Aligning reads
5.0 years ago by michael.ante ★ 3.9k
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2
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2.7k
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Comment: C: FASTQ exctract ID's
5.0 years ago by michael.ante ★ 3.9k
1
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1
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1.8k
views
Comment: C: STAR error (segmentation fault) in Aligning reads
5.0 years ago by michael.ante ★ 3.9k
0
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1
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1.9k
views
Answer: A: Error in piRNA gtf file while featurecounts step in STAR aligner?
5.0 years ago by michael.ante ★ 3.9k
2
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1
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1.2k
views
Answer: C: Scaleable trimming of GenBank sequences?
5.0 years ago by michael.ante ★ 3.9k
0
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0
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1.1k
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Comment: C: Data set containing corresponding RNA-seq and RT-Qpcr data
5.0 years ago by michael.ante ★ 3.9k
0
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0
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1.7k
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Answer: A: Transcription factor target gene
5.0 years ago by michael.ante ★ 3.9k
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1
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3.1k
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Comment: C: bash loop to count variants using vcftools
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 3.9k
0
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0
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2.2k
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Comment: C: RNA-SeQC v1.1.8 transcript_id attribute was not found
5.0 years ago by michael.ante ★ 3.9k
1
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1
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3.0k
views
Answer: A: two questions in loading data
updated 5.1 years ago by 44k • written 9.1 years ago by ★ 3.9k
0
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1
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2.5k
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Answer: A: Tophat, low alignement left read
updated 5.1 years ago by 44k • written 9.1 years ago by ★ 3.9k
435 results • Page 1 of 9
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