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Comment: C: Why Wilcox.test keep giving (p-val = 0.1) even when there is significant differe
4.8 years ago by Constantine ▴ 290
3
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2
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2.5k
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Answer: A: Why Wilcox.test keep giving (p-val = 0.1) even when there is significant differe
4.8 years ago by Constantine ▴ 290
0
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0
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8.1k
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Answer: A: Stuck creating reference genome with STAR
updated 4.9 years ago by 44k • written 8.9 years ago by ▴ 290
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0
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7.8k
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Answer: A: Human transcriptome reference for RNASeq analysis
updated 5.0 years ago by 44k • written 9.0 years ago by ▴ 290
3
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2
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9.2k
views
Answer: A: Pearson Correlation test between two Chip-Seq data sets
updated 5.0 years ago by 44k • written 9.1 years ago by ▴ 290
6
votes
5
replies
3.1k
views
H3K4me3 occupancy visualisation
ChIP-Seq
updated 2.2 years ago by 44k • written 9.2 years ago by ▴ 290
0
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0
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4.1k
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Comment: C: MNase-seq / fragment size selection
6.0 years ago by Constantine ▴ 290
5
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0
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2.6k
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Answer: A: MS Bioinformatics Project
6.7 years ago by Constantine ▴ 290
0
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0
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4.3k
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Answer: A: RNA-Seq time course DESeq2 analysis
7.4 years ago by Constantine ▴ 290
1
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0
replies
13k
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Comment: C: extract small heatmap from big one deeptools
7.8 years ago by Constantine ▴ 290
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1
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13k
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Comment: C: extract small heatmap from big one deeptools
7.8 years ago by Constantine ▴ 290
2
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1
reply
13k
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Answer: A: extract small heatmap from big one deeptools
7.8 years ago by Constantine ▴ 290
3
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1
reply
2.6k
views
Answer: A: Quantification of repeats expression
7.8 years ago by Constantine ▴ 290
1
vote
0
replies
11k
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Comment: C: ChipSeq: merge bam file before peak calling
8.2 years ago by Constantine ▴ 290
3
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2
replies
11k
views
Answer: A: ChipSeq: merge bam file before peak calling
8.2 years ago by Constantine ▴ 290
8
votes
3
replies
8.4k
views
Deeptools sample scaling
ChIP-Seq sequencing deepTools
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 290
1
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1
reply
4.1k
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Comment: C: MNase-seq / fragment size selection
8.4 years ago by Constantine ▴ 290
0
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1
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4.1k
views
Comment: C: MNase-seq / fragment size selection
8.4 years ago by Constantine ▴ 290
5
votes
8
replies
4.1k
views
MNase-seq / fragment size selection
MNase-seq sequencing DNA
updated 8.4 years ago by 104k • written 8.4 years ago by ▴ 290
2
votes
1
reply
2.4k
views
MNase-Seq fragment size
sequencing nucleosome
updated 8.5 years ago by 104k • written 8.5 years ago by ▴ 290
13
votes
7
replies
22k
views
Error in creating BAM index
ChIP-Seq RNA-Seq
updated 2.1 years ago by 44k • written 10.0 years ago by ▴ 290
1
vote
0
replies
3.0k
views
Answer: A: Pipeline for RNA-seq analysis
8.9 years ago by Constantine ▴ 290
2
votes
2
replies
3.6k
views
Plotting Coverage - Strand specification
ChIP-Seq next-gen-sequencing
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 290
3
votes
2
replies
2.2k
views
DE comparison between different softwares
RNA-Seq next-gen-sequencing
updated 2.3 years ago by 44k • written 9.1 years ago by ▴ 290
1
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0
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5.0k
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Comment: C: NGS plot error
9.1 years ago by Constantine ▴ 290
2
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3
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5.0k
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NGS plot error
ChIP-Seq next-gen-sequencing
updated 2.3 years ago by 44k • written 9.1 years ago by ▴ 290
0
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0
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3.4k
views
Comment: C: ChIP-seq blacklisted regions (mouse)
9.1 years ago by Constantine ▴ 290
1
vote
2
replies
3.4k
views
ChIP-seq blacklisted regions (mouse)
ChIP-Seq next-gen-sequencing
updated 2.3 years ago by 44k • written 9.1 years ago by ▴ 290
0
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1
reply
3.1k
views
Comment: C: Intersecting ChIP/RNA-seq data
9.2 years ago by Constantine ▴ 290
0
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0
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3.1k
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Comment: C: Intersecting ChIP/RNA-seq data
9.2 years ago by Constantine ▴ 290
0
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2
replies
3.1k
views
Comment: Comment: Intersecting ChIP/RNA-seq data
updated 2.2 years ago by 44k • written 9.2 years ago by ▴ 290
0
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1
reply
3.1k
views
Comment: Comment: Intersecting ChIP/RNA-seq data
updated 2.2 years ago by 44k • written 9.2 years ago by ▴ 290
8
votes
13
replies
3.1k
views
Intersecting ChIP/RNA-seq data
RNA-Seq ChIP-Seq
updated 2.2 years ago by 44k • written 9.2 years ago by ▴ 290
0
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1
reply
3.1k
views
Comment: C: Intersecting ChIP/RNA-seq data
9.2 years ago by Constantine ▴ 290
0
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1
reply
3.2k
views
Comment: Comment: Creating a matrix for edgeR/limma import
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 290
1
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5
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3.2k
views
Creating a matrix for edgeR/limma import
RNA-Seq R
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 290
0
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0
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3.2k
views
Comment: Comment: Creating a matrix for edgeR/limma import
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 290
3
votes
4
replies
3.9k
views
IGV browser error
sequencing ChIP-Seq RNA-Seq
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 290
0
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0
replies
22k
views
Comment: C: Error in creating BAM index
10.0 years ago by Constantine ▴ 290
0
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0
replies
22k
views
Comment: Comment: Error in creating BAM index
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 290
0
votes
0
replies
3.3k
views
Comment: C: Error in importing BAM files
10.0 years ago by Constantine ▴ 290
1
vote
2
replies
3.3k
views
Error in importing BAM files
ChIP-Seq
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 290
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