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How can probability cut off value be set for amino acids residues that causes functional divergence by using False Discover Rate (Diverge Software)?
protein-family amino-acid Divergence
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 60
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How can I set threshold for amino acid site profile of type1 functional divergence?
functional-divergence gene-family
updated 23 months ago by 44k • written 9.4 years ago by ▴ 60
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How can I calculate p value for rate analysis of particular lineage?
rate-analysis evolution P-value selection
updated 23 months ago by 44k • written 9.4 years ago by ▴ 60
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Haplotype Reconstruction using PHASE
genotype Population-Genetics Haplotype PHASE
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 60
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Which criteria should be used for the evalution of Protein strucutre ?
Protein-Structure I-Tasser Evaluation-Criteria
updated 2.6 years ago by 44k • written 9.7 years ago by ▴ 60
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4.9k
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Answer: Answer: RMSD of a structural superposition
updated 2.6 years ago by 44k • written 9.7 years ago by ▴ 60
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2.0k
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Is protein structure prediction with low query coverage an appropriate method?
Protein abinito structure
updated 2.6 years ago by 44k • written 9.7 years ago by ▴ 60
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3
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can ihs/ehh be applied on specific geographic region population?
ihs population-genetics selection ehhs
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 60
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3.0k
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Can I apply ihs/ehh on snp?
population-genetics snp ehh ihs selection
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 60
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Comment: Comment: How can I download snp genotype file from 1000 Genome?
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 60
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5
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7.0k
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How can I download snp genotype file from 1000 Genome?
SNP genotype population Genetics
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 60
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which software/program is suitable for visualization of PHASE out put files?
PHASE Haplotype Population Genetics
9.8 years ago by evo_genomics ▴ 60
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Answer: A: how can I recode phased haplotype?
9.8 years ago by evo_genomics ▴ 60
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Comment: Comment: PAML method for estimation of dN/dS
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 60
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2
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3.1k
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PAML method for estimation of dN/dS
selection gene lineage
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 60
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1
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1.9k
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Tool Generates CDS sequence
CDS sequence
updated 17 months ago by 44k • written 10.0 years ago by ▴ 60
6
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3
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3.5k
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tests for negative selection
gene negative-selection
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 60
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6.7k
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Comment: Comment: detection of positive selection in population using Tajima's n Fu Li test
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 60
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6
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6.7k
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detection of positive selection in population using Tajima's n Fu Li test
gene evolution
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 60
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Comment: Comment: detection of positive selection in population using Tajima's n Fu Li test
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 60
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3.5k
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Comment: Comment: tests for negative selection
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 60
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