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Answer: Answer: querying 5'UTR, first exon, and flanking sequences
updated 2.5 years ago by 45k • written 9.7 years ago by ▴ 220
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8
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3.8k
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Tool: pyGeno 1.2: Python package for Personalized Genomics and Proteomics
python SNP rna-seq dbSNP ensembl
updated 2.9 years ago by 45k • written 10.1 years ago by ▴ 220
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3.8k
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Comment: Comment: pyGeno 1.2: Python package for Personalized Genomics and Proteomics
7.7 years ago by Tariq Daouda ▴ 220
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14k
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Answer: Answer: FASTA and FASTQ tools
updated 2.3 years ago by 45k • written 9.9 years ago by ▴ 220
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1
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3.2k
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Answer: Answer: Ensembl & biomaRt: extracting in-frame codons near specified position
updated 2.3 years ago by 45k • written 9.9 years ago by ▴ 220
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2.9k
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Answer: A: Ensembl REST requests for CDS sequences returning AA sequences
10.0 years ago by Tariq Daouda ▴ 220
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5.5k
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Answer: Answer: Ensembl REST: How to retrieve CDS from a protein id?
updated 2.2 years ago by 45k • written 10.0 years ago by ▴ 220
2
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0
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38k
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Answer: Answer: extract only geneID and gene symbol from GTF file
updated 2.2 years ago by 45k • written 10.0 years ago by ▴ 220
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0
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3.8k
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Answer: Answer: From Ensembl protein ID to sequence
updated 2.9 years ago by 45k • written 10.1 years ago by ▴ 220
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0
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3.8k
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Comment: C: pyGeno 1.2: Python package for Personalized Genomics and Proteomics
10.1 years ago by Tariq Daouda ▴ 220
0
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1
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3.8k
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Comment: Comment: pyGeno 1.2: Python package for Personalized Genomics and Proteomics
updated 2.9 years ago by 45k • written 10.1 years ago by ▴ 220
4
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2
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15k
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Answer: Answer: How to get gene name from coordinates using python.
updated 3.0 years ago by 45k • written 10.2 years ago by ▴ 220
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9.0k
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Answer: Answer: Parse VCF file
updated 3.0 years ago by 45k • written 10.2 years ago by ▴ 220
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0
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4.8k
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Answer: Answer: downloading a Mus musculus genes dataset from ensembl biomart
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
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5.3k
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Answer: Answer: Need code to filter VCF files based on rsid using Pysam
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
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1
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5.3k
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Comment: Comment: Need code to filter VCF files based on rsid using Pysam
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
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1
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5.3k
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Comment: Comment: Need code to filter VCF files based on rsid using Pysam
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
0
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1
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5.3k
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Answer: Answer: Need code to filter VCF files based on rsid using Pysam
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
1
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1
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2.8k
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Comment: Comment: Storing genomes locally
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
1
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1
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2.8k
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Answer: Answer: Storing genomes locally
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
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2.8k
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Comment: Comment: Storing genomes locally
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
1
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0
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2.3k
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Answer: Answer: extracting snoRNA intronic sequences
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
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0
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3.1k
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Answer: Answer: Ensembl exon-to-dna mapping
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
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0
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3.5k
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Answer: Answer: Ensembl Gene Sequence Data File?
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
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0
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14k
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Answer: Answer: How To Merge Isoforms For A Gene
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
1
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1
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3.6k
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Answer: Answer: How to extract common exons of multiple transcripts of the same gene
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 220
3
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0
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12k
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Answer: Answer: How to extract DNA sequences for individual genes from GenBank complete genome f
updated 4.1 years ago by 45k • written 10.4 years ago by ▴ 220
0
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0
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12k
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Comment: Comment: How to extract DNA sequences for individual genes from GenBank complete genome f
updated 4.1 years ago by 45k • written 10.4 years ago by ▴ 220
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