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Comment: Comment: HISAT2 error message :Could not locate a HISAT2 index corresponding to basename
3.5 years ago by Michel Edwar ▴ 80
0
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Comment: Comment: HISAT2 error message :Could not locate a HISAT2 index corresponding to basename
3.5 years ago by Michel Edwar ▴ 80
1
vote
4
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1.4k
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HISAT2 error message :Could not locate a HISAT2 index corresponding to basename "/mnt/c/mkr-index2/mm10_adera/genome"
hisat2
updated 3.5 years ago by 86k • written 3.5 years ago by ▴ 80
1
vote
1
reply
1.6k
views
how can you say if two orthologous proteins belong to the same family
evolution phylogenetics
updated 2.4 years ago by 44k • written 9.0 years ago by ▴ 80
0
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1
reply
2.4k
views
Comment: C: does the best substitution model for a phylogeny tree differ between one method
updated 5.2 years ago by 44k • written 9.6 years ago by ▴ 80
10
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6
replies
1.8k
views
where to download mm9.fa masked?
ChIP-Seq genome
updated 5.2 years ago by ▴ 280 • written 5.3 years ago by ▴ 80
4
votes
1
reply
2.9k
views
Hisat2 index mm10 download
RNA-Seq Hisat2
5.2 years ago by Michel Edwar ▴ 80
0
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0
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1.8k
views
Comment: A: where to download mm9.fa masked?
5.3 years ago by Michel Edwar ▴ 80
3
votes
3
replies
4.3k
views
how to normalize microarray expression set
GDS getGEO RMA
updated 5.7 years ago by 88k • written 7.2 years ago by ▴ 80
0
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1
reply
2.8k
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Comment: C: How to get gene counts with HTseq
5.8 years ago by Michel Edwar ▴ 80
0
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0
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2.8k
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Comment: C: How to get gene counts with HTseq
5.8 years ago by Michel Edwar ▴ 80
0
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5
replies
2.8k
views
How to get gene counts with HTseq
RNA-Seq counts reads htseq
5.8 years ago by Michel Edwar ▴ 80
0
votes
1
reply
2.2k
views
how to calculate gene probability from gene expression matrix
microarray RNA-Seq
updated 7.1 years ago by 88k • written 7.1 years ago by ▴ 80
2
votes
0
replies
5.1k
views
Answer: A: I can not see BAM file in IGV
updated 7.6 years ago by 47k • written 7.6 years ago by ▴ 80
3
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5
replies
5.1k
views
I can not see BAM file in IGV
igv methylation
7.6 years ago by Michel Edwar ▴ 80
0
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1
reply
5.1k
views
Comment: C: I can not see BAM file in IGV
7.6 years ago by Michel Edwar ▴ 80
0
votes
1
reply
1.9k
views
is there a program to predict homophilic vs heterophilic binding of proteins
protein-binding
updated 2.4 years ago by 44k • written 9.0 years ago by ▴ 80
4
votes
1
reply
3.6k
views
How to calculate 4DTv distance (D4DTv) that stands for fourfold synonymous third-codon transversion ?
gene codon
updated 2.4 years ago by 44k • written 9.0 years ago by ▴ 80
1
vote
2
replies
2.0k
views
Does PAML (codeml ) analysis include the introns or it correspond only to the CDS ?
PAML introns
updated 23 months ago by 44k • written 9.6 years ago by ▴ 80
0
votes
3
replies
2.4k
views
does the best substitution model for a phylogeny tree differ between one method to the other ?
phylogeny subsititution-model
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 80
0
votes
1
reply
2.5k
views
The reason two identical sequences have different accession numbers and different loci
alignment copy-number
updated 23 months ago by 44k • written 9.6 years ago by ▴ 80
1
vote
1
reply
4.6k
views
ProtTest and PhyML
ProtTest PhyML
updated 23 months ago by 44k • written 9.6 years ago by ▴ 80
0
votes
0
replies
2.1k
views
what does the branch length computed with APE neighbor joining tree represent ?
ape neighbor-joining dist.alignment tree
updated 2.5 years ago by 44k • written 9.7 years ago by ▴ 80
0
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1
reply
2.4k
views
how to make cufflinks produce the nuclotide sequence of the gene + 5000 upstream necloutides
promoter upstream cufflinks bam
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 80
7
votes
4
replies
3.0k
views
how to get actual gene sequence after cufflinks
RNA-Seq cufflinks
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 80
0
votes
1
reply
2.0k
views
Comment: Comment: Are there any neanderthals genes predictions methods ?
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 80
2
votes
3
replies
2.0k
views
Are there any neanderthals genes predictions methods ?
genes sequence neanderthals
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 80
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