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Genotype (DNA-Seq) - Phenotype (RNA-Seq) database
RNA-Seq DNA-Seq
updated 2.2 years ago by 44k • written 9.1 years ago by ▴ 150
17
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8
replies
8.6k
views
7 follow
Large-scale open-source bioinformatics datasets
RNA-Seq next-gen ChIP-Seq
updated 2.2 years ago by 44k • written 9.2 years ago by ▴ 150
3
votes
9
replies
3.1k
views
HISAT2 output statistics does not match the actual output
RNA-Seq alignment sequencing
updated 7.5 years ago by 20 • written 7.6 years ago by ▴ 150
0
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1
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3.0k
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BAM file processing in chunks in R
R sequencing RNA-Seq
updated 7.6 years ago by ★ 5.2k • written 7.6 years ago by ▴ 150
0
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1
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3.1k
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Comment: C: HISAT2 output statistics does not match the actual output
7.6 years ago by Tobias ▴ 150
0
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1
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3.1k
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Comment: C: HISAT2 output statistics does not match the actual output
7.6 years ago by Tobias ▴ 150
0
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1
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3.1k
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Comment: C: HISAT2 output statistics does not match the actual output
7.6 years ago by Tobias ▴ 150
0
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2
replies
3.1k
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Comment: C: HISAT2 output statistics does not match the actual output
7.6 years ago by Tobias ▴ 150
1
vote
2
replies
1.6k
views
List of all human and mouse TFs
TF transcription
updated 7.7 years ago by 27k • written 7.7 years ago by ▴ 150
1
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0
replies
1.8k
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SNP-phenotype association databases
GWAS SNP
8.0 years ago by Tobias ▴ 150
0
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1
reply
1.3k
views
Overview over DNA sequencing data compression
DNA-Seq ChIP-Seq RNA-Seq Assembly SNP
8.2 years ago by Tobias ▴ 150
0
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0
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2.0k
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Comment: C: Database for Transcription factor classifaction
8.4 years ago by Tobias ▴ 150
1
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2
replies
2.0k
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Database for Transcription factor classifaction
database transcription factors
updated 8.4 years ago by ★ 4.0k • written 8.4 years ago by ▴ 150
2
votes
5
replies
2.4k
views
Public patient database for Alzheimer's disease patients
database
updated 8.5 years ago by ★ 5.2k • written 8.5 years ago by ▴ 150
0
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1
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1.2k
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Proteins types used in ENCODE
ChIP-Seq ENCODE
updated 8.5 years ago by 20 • written 8.6 years ago by ▴ 150
0
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0
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1.7k
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RNA-Seq replicates handling for prediction
RNA-Seq R ChIP-Seq sequencing
8.5 years ago by Tobias ▴ 150
0
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1
reply
1.2k
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Catchy term for epigenome-associated data
ChIP-Seq
8.7 years ago by Tobias ▴ 150
0
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0
replies
3.0k
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Comment: C: CAGE processing (from BAM to expression values per Gene/Isoform)
8.8 years ago by Tobias ▴ 150
5
votes
2
replies
1.4k
views
Forum: Hot questions in sequencing data accessability
RNA-Seq ChIP-Seq next-gen-sequencing
updated 2.3 years ago by 44k • written 8.8 years ago by ▴ 150
0
votes
3
replies
3.0k
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Cuffnorm: FPKM values of Genes also appearing among isoforms (but with different value)
next-gen-sequencing cufflinks rna-seq cuffnorm
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 150
0
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0
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3.0k
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Comment: C: Cuffdiff: FPKM values of Genes also appearing among isoforms (but with different
8.9 years ago by Tobias ▴ 150
5
votes
2
replies
3.0k
views
CAGE processing (from BAM to expression values per Gene/Isoform)
RNA-Seq next-gen Assembly sequencing CAGE
updated 8.9 years ago by ★ 2.4k • written 8.9 years ago by ▴ 150
0
votes
0
replies
1.5k
views
A concise overview of enhancer-promoter resp. dna-to-promotor interactions
ChIP-Seq
8.9 years ago by Tobias ▴ 150
0
votes
1
reply
8.6k
views
Comment: C: Large-scale open-source bioinformatics datasets
9.1 years ago by Tobias ▴ 150
0
votes
1
reply
3.1k
views
Comment: Comment: Inexplicable Cufflinks output FPKM variation
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 150
0
votes
1
reply
3.1k
views
Comment: Comment: Inexplicable Cufflinks output FPKM variation
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 150
0
votes
1
reply
3.1k
views
Comment: Comment: Inexplicable Cufflinks output FPKM variation
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 150
0
votes
1
reply
3.1k
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Comment: C: Inexplicable Cufflinks output FPKM variation
9.8 years ago by Tobias ▴ 150
1
vote
9
replies
3.1k
views
Inexplicable Cufflinks output FPKM variation
rna-seq cufflnks cuffnorm
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 150
0
votes
0
replies
1.6k
views
Proteomic and epigenetic data
ChIP-Seq
9.8 years ago by Tobias ▴ 150
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