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Comment: Comment: Keep lines that dont match awk pattern, edit those that do
2.7 years ago by Friederike 9.0k
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Answer: Answer: Keep lines that dont match awk pattern, edit those that do
2.7 years ago by Friederike 9.0k
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Answer: Answer: Re-clustering of cell population in scRNA seq
2.7 years ago by Friederike 9.0k
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Comment: Comment: bedtools genomecov issue with calculating coverage across called peaks?
2.7 years ago by Friederike 9.0k
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Comment: Comment: DMRs, how common are they and how long?
2.7 years ago by Friederike 9.0k
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Comment: Comment: DMRs, how common are they and how long?
2.7 years ago by Friederike 9.0k
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Comment: Comment: How to match or compare row wise between two excel files.
2.7 years ago by Friederike 9.0k
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1.4k
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Comment: Comment: DMRs, how common are they and how long?
2.7 years ago by Friederike 9.0k
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980
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Comment: Comment: DEG for multiple comparisons
2.7 years ago by Friederike 9.0k
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1.4k
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Answer: Answer: DMRs, how common are they and how long?
2.7 years ago by Friederike 9.0k
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1.6k
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Comment: Comment: Convert very large sparse matrix to matrix (scRNA-seq analysis)
2.7 years ago by Friederike 9.0k
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980
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Comment: Comment: DEG for multiple comparisons
2.7 years ago by Friederike 9.0k
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1.5k
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Answer: Answer: Using Leiden algorithm to cluster bulk RNA samples
2.7 years ago by Friederike 9.0k
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Comment: Comment: Associate Bioinformatician - Mount Sinai (NYC)
2.7 years ago by Friederike 9.0k
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1.5k
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Job: Genomic Scientist at Weill Cornell Medicine in NYC
data-science genomics molecular-biology
updated 22 months ago by 44k • written 2.7 years ago by 9.0k
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Answer: Answer: Seurat Dotplot _ How can I have different panels on my doplot?
2.8 years ago by Friederike 9.0k
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2.0k
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Comment: Comment: Differential Expression Gene analysis using normalized data
2.8 years ago by Friederike 9.0k
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608
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Comment: Comment: differential expression in R
2.8 years ago by Friederike 9.0k
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6.1k
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Comment: Comment: scvelo vs velocyto
2.8 years ago by Friederike 9.0k
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2.7k
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Answer: Answer: Cellranger command for RNA velocity
2.9 years ago by Friederike 9.0k
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3.2k
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Comment: Comment: normalization for unsupervised analysis by DESeq2
2.9 years ago by Friederike 9.0k
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3.2k
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Comment: Comment: normalization for unsupervised analysis by DESeq2
2.9 years ago by Friederike 9.0k
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3.2k
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Comment: Comment: normalization for unsupervised analysis by DESeq2
2.9 years ago by Friederike 9.0k
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3.2k
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Comment: Comment: normalization for unsupervised analysis by DESeq2
2.9 years ago by Friederike 9.0k
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3.2k
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Comment: Comment: normalization for unsupervised analysis by DESeq2
2.9 years ago by Friederike 9.0k
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764
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Answer: Answer: Distinguish the grafts in bulk RNA-seq
2.9 years ago by Friederike 9.0k
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Comment: Comment: single cell RNA-seq: Is there a way to tell if one dataset is more similar to an
2.9 years ago by Friederike 9.0k
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1.6k
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Comment: Comment: What is the difference between functional enrichment analysis and canonical path
2.9 years ago by Friederike 9.0k
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1.6k
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Comment: Comment: What is the difference between functional enrichment analysis and canonical path
2.9 years ago by Friederike 9.0k
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1.2k
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Comment: Comment: Where I can get pipeline for covid genome assembly?
2.9 years ago by Friederike 9.0k
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1.5k
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Comment: Comment: Downstream analysis of VCF file
2.9 years ago by Friederike 9.0k
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1.7k
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Comment: Comment: Best practice for RNA-Seq aligned sequences data for visualization via IGV
2.9 years ago by Friederike 9.0k
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641
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Answer: Answer: RNA seq
2.9 years ago by Friederike 9.0k
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1.7k
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Comment: Comment: what are Differentially Expressed Genes?
3.0 years ago by Friederike 9.0k
2
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1
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1.7k
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Comment: Comment: what are Differentially Expressed Genes?
3.0 years ago by Friederike 9.0k
2
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6.0k
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Comment: Comment: how to process spike-in with bamCoverage and plotHeatmap (with deeptools)
3.0 years ago by Friederike 9.0k
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891
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Comment: Comment: Are multi mapped reads used in ChIP-sea peaking calling such as MACS2?
3.0 years ago by Friederike 9.0k
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1.1k
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Comment: Comment: window size
3.0 years ago by Friederike 9.0k
1
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1.4k
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Comment: Comment: Why do some genes are more prone to dropout effect in scRNA-seq?
3.0 years ago by Friederike 9.0k
7
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1
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1.4k
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Answer: Answer: Why do some genes are more prone to dropout effect in scRNA-seq?
3.0 years ago by Friederike 9.0k
1
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0
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2.7k
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Comment: Comment: Genome Size Estimation with Jellyfish and Genome Scope is Unexpectedly Small
3.0 years ago by Friederike 9.0k
1
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1
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2.7k
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Comment: Comment: Genome Size Estimation with Jellyfish and Genome Scope is Unexpectedly Small
3.0 years ago by Friederike 9.0k
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1
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2.0k
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Comment: Comment: Extracting matching reads by read ID
3.0 years ago by Friederike 9.0k
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1
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2.0k
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Comment: Comment: Extracting matching reads by read ID
3.0 years ago by Friederike 9.0k
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8
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2.0k
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Extracting matching reads by read ID
BAM
updated 3.0 years ago by 147k • written 3.0 years ago by 9.0k
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1.6k
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Comment: Comment: Merging Bed files with depth information
3.0 years ago by Friederike 9.0k
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2.0k
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Comment: Comment: Extracting matching reads by read ID
3.0 years ago by Friederike 9.0k
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0
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2.5k
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Comment: Comment: I have been in trouble with microbiome analysis. I need any suggestion!!
3.0 years ago by Friederike 9.0k
0
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1
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972
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Comment: Comment: Alignment of de novo assembled transcripts to reference transcriptome?
3.0 years ago by Friederike 9.0k
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1
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2.5k
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Comment: Comment: I have been in trouble with microbiome analysis. I need any suggestion!!
3.0 years ago by Friederike 9.0k
1,029 results • Page 2 of 21
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