Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
0
replies
526
views
Comment: Comment: transcriptomic data for molecular subtyping
9 months ago by mark.ziemann ★ 1.9k
2
votes
0
replies
593
views
Answer: Answer: How to find GO function from GEO2R results
9 months ago by mark.ziemann ★ 1.9k
1
vote
1
reply
526
views
Answer: Answer: transcriptomic data for molecular subtyping
9 months ago by mark.ziemann ★ 1.9k
0
votes
0
replies
400
views
Answer: Answer: Aneuploidy analysis from WGS
9 months ago by mark.ziemann ★ 1.9k
0
votes
1
reply
726
views
Comment: Comment: Simulation of gene level methylation data
9 months ago by mark.ziemann ★ 1.9k
1
vote
2
replies
1.2k
views
Answer: Answer: Geo2R troubleshooting
9 months ago by mark.ziemann ★ 1.9k
0
votes
1
reply
726
views
Answer: Answer: Simulation of gene level methylation data
9 months ago by mark.ziemann ★ 1.9k
1
vote
1
reply
1.1k
views
Answer: Answer: Methods to analyze EM-seq data
9 months ago by mark.ziemann ★ 1.9k
0
votes
0
replies
621
views
Comment: Comment: Error in mitch reports in R
10 months ago by mark.ziemann ★ 1.9k
0
votes
0
replies
529
views
Answer: Answer: mitch analysis report priority by standard deviation
10 months ago by mark.ziemann ★ 1.9k
1
vote
1
reply
462
views
Answer: Answer: How to get differntial Protein expression from protein abundance?
10 months ago by mark.ziemann ★ 1.9k
1
vote
0
replies
658
views
Comment: Comment: Single-end strand specific Rna-Seq: Which strand that the reads from.
15 months ago by mark.ziemann ★ 1.9k
0
votes
1
reply
930
views
Comment: Comment: ClusterProfiler GeneRatio demoninator not the same for all values
15 months ago by mark.ziemann ★ 1.9k
0
votes
0
replies
865
views
Answer: Answer: Biological replicates in RNA-seq
18 months ago by mark.ziemann ★ 1.9k
0
votes
1
reply
659
views
Answer: Answer: clusterprofile enrichment analysis
18 months ago by mark.ziemann ★ 1.9k
0
votes
0
replies
1.6k
views
Comment: Comment: Clusterprofiler error: No gene can be mapped (different from previous posts)
22 months ago by mark.ziemann ★ 1.9k
3
votes
1
reply
1.1k
views
Answer: Answer: What exactly are unmappable regions?
22 months ago by mark.ziemann ★ 1.9k
3
votes
1
reply
2.1k
views
Answer: Answer: gseGO by fold-change returns errors
22 months ago by mark.ziemann ★ 1.9k
1
vote
1
reply
738
views
Comment: Comment: How can I quantify degradation of DNA present in the sample after sequencing?
23 months ago by mark.ziemann ★ 1.9k
0
votes
0
replies
921
views
Answer: Answer: Combining multiple datasets increases the fgsea p-value
23 months ago by mark.ziemann ★ 1.9k
4
votes
0
replies
1.8k
views
Answer: Answer: How to create a new gene signature from RNAseq data
2.3 years ago by mark.ziemann ★ 1.9k
0
votes
0
replies
747
views
Comment: Comment: Finding the similarity between two arrays of sequences
2.3 years ago by mark.ziemann ★ 1.9k
1
vote
1
reply
750
views
Answer: Answer: Horizontal Gene Tranfer/Recombination
2.3 years ago by mark.ziemann ★ 1.9k
0
votes
0
replies
1.5k
views
Comment: Comment: feature counts invalid parameter
2.3 years ago by mark.ziemann ★ 1.9k
3
votes
1
reply
720
views
Answer: Answer: Removing or Setting pairs to NA based on conditions in another data frame (R)
2.3 years ago by mark.ziemann ★ 1.9k
2
votes
1
reply
1.0k
views
Comment: Comment: GSEA - Software or R
2.3 years ago by mark.ziemann ★ 1.9k
0
votes
1
reply
826
views
Comment: Comment: blastn command line
2.3 years ago by mark.ziemann ★ 1.9k
1
vote
1
reply
864
views
Answer: Answer: sequence error
2.3 years ago by mark.ziemann ★ 1.9k
2
votes
0
replies
1.5k
views
Answer: Answer: GC content calculation in percentage
2.3 years ago by mark.ziemann ★ 1.9k
0
votes
0
replies
676
views
Answer: Answer: Pathway Enrichment Analysis according to tumor mutation burden.
2.3 years ago by mark.ziemann ★ 1.9k
0
votes
0
replies
1.8k
views
Comment: Comment: How can I do an inner_join with multiple .csv files on the linux command line?
2.3 years ago by mark.ziemann ★ 1.9k
3
votes
2
replies
1.8k
views
Answer: Answer: How can I do an inner_join with multiple .csv files on the linux command line?
2.3 years ago by mark.ziemann ★ 1.9k
1
vote
0
replies
928
views
Comment: Comment: DNA sequencing from cord blood stem cells
2.3 years ago by mark.ziemann ★ 1.9k
1
vote
0
replies
643
views
Comment: Comment: Differential Gene Expression of lncRNAs analysis from GENCODE reference file?
2.3 years ago by mark.ziemann ★ 1.9k
2
votes
1
reply
928
views
Answer: Answer: DNA sequencing from cord blood stem cells
2.3 years ago by mark.ziemann ★ 1.9k
2
votes
1
reply
915
views
Answer: Answer: Accessing particular gene set with msigdbr on R
2.3 years ago by mark.ziemann ★ 1.9k
4
votes
1
reply
937
views
Answer: Answer: Repeats/Transposons finding
2.4 years ago by mark.ziemann ★ 1.9k
0
votes
1
reply
690
views
Answer: Answer: How to get gene expression data from list of gene
2.4 years ago by mark.ziemann ★ 1.9k
0
votes
0
replies
1.1k
views
Comment: Comment: 3d plot in matplotlib of my own data
2.4 years ago by mark.ziemann ★ 1.9k
2
votes
0
replies
806
views
Comment: Comment: Good statistics for RNA-seq alignments using RSEM
2.4 years ago by mark.ziemann ★ 1.9k
1
vote
0
replies
503
views
Answer: Answer: Bacterial small-rna analysis
2.4 years ago by mark.ziemann ★ 1.9k
0
votes
0
replies
3.2k
views
Comment: Comment: mapping reads using kallisto - rna seq analysis
2.4 years ago by mark.ziemann ★ 1.9k
0
votes
0
replies
1.8k
views
Comment: Comment: RepeatMasker error
2.4 years ago by mark.ziemann ★ 1.9k
0
votes
1
reply
3.2k
views
Comment: Comment: mapping reads using kallisto - rna seq analysis
2.4 years ago by mark.ziemann ★ 1.9k
2
votes
0
replies
695
views
Answer: Answer: GO Term Analysis in scRNASeq data with low number of genes expressed
2.4 years ago by mark.ziemann ★ 1.9k
1
vote
0
replies
588
views
Answer: Answer: How to identify the genome build a dataset was aligned too?
2.4 years ago by mark.ziemann ★ 1.9k
0
votes
0
replies
1.0k
views
Comment: Comment: NGS reads calculation
2.4 years ago by mark.ziemann ★ 1.9k
1
vote
1
reply
1.8k
views
Comment: Comment: RepeatMasker error
2.4 years ago by mark.ziemann ★ 1.9k
16
votes
11
replies
5.4k
views
9 follow
Forum: Methodological problems are extremely common for enrichment analysis - beware the pitfalls before you publish
GSEA DAVID enrichment-analysis -geneontology
updated 18 months ago by 44k • written 2.7 years ago by ★ 1.9k
1
vote
0
replies
1.5k
views
Comment: Comment: DMR calling for EWAS meta-analysis
3.0 years ago by mark.ziemann ★ 1.9k
210 results • Page 1 of 5
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6