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Answer: Answer: Problems with STAR mapping output
updated 2.4 years ago by 45k • written 9.8 years ago by ★ 2.0k
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1
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2.3k
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Answer: Answer: Strategies For De Novo Assembly Of A Reference
updated 2.4 years ago by 45k • written 9.8 years ago by ★ 2.0k
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3.6k
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Comment: C: Counting reads for gene transcripts with overlapping loci
9.9 years ago by mark.ziemann ★ 2.0k
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2.5k
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Comment: C: How can i retrieve all cds from a ensembl genetree？
9.9 years ago by mark.ziemann ★ 2.0k
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Comment: Comment: Determine mutational profile from a BAM file?
updated 2.3 years ago by 45k • written 9.9 years ago by ★ 2.0k
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2
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Determine mutational profile from a BAM file?
RNA-Seq genome
updated 2.3 years ago by 45k • written 9.9 years ago by ★ 2.0k
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Answer: Answer: what is applications of gene ranking except GSEA?
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
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4.6k
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Answer: A: Comparing gene conservation across species
10.0 years ago by mark.ziemann ★ 2.0k
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3.0k
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Answer: A: Promoter Motifs (+) and (-) strands
10.0 years ago by mark.ziemann ★ 2.0k
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3.2k
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Answer: Answer: Get Allele Frequency of each SNP in RNASeq
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
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Comment: Comment: Question: How to compare the gene expression signature of Primary tumor cell and
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
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1
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2.8k
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Answer: Answer: Finding ortholog transcript sequences after de novo transcriptome assembly
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
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Answer: Answer: JAVA and NGS
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
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1.9k
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Answer: Answer: Getting BLAST Clusters Classifier performance for Protein classes
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
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2.8k
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Comment: Comment: Transcriptome reconstruction from both short reads and long sequences
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
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3.0k
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Answer: A: PSEA- protein set enrichment analsyis
10.0 years ago by mark.ziemann ★ 2.0k
2
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0
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2.0k
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Answer: Answer: look at expression by locus
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
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Answer: Answer: Generate Simulated data for Differentially methylated regions (DMRs)
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
2
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1
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2.8k
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Answer: A: Transcriptome reconstruction from both short reads and long sequences
10.0 years ago by mark.ziemann ★ 2.0k
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2.0k
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Comment: C: smallRNA-seq data for normal bone marrow in Human
10.0 years ago by mark.ziemann ★ 2.0k
2
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2.5k
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Answer: Answer: How to combine bisulfite sequencing data with Medip seq and/or MRE-seq
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
3
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6.1k
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Answer: A: tRNA expression analysis from RNA-Seq
10.0 years ago by mark.ziemann ★ 2.0k
2
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1
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2.6k
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Answer: A: gene differential expression array analysis: weird pvalue distribution
10.0 years ago by mark.ziemann ★ 2.0k
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1
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3.1k
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Comment: C: Question: How to compare the gene expression signature of Primary tumor cell and
10.0 years ago by mark.ziemann ★ 2.0k
1
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0
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2.0k
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Answer: Answer: Known transcription factor binding sites and enhancer locations in Pigs
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
1
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0
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5.8k
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Answer: Answer: z-Score vs fold enrichment
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
1
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1
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4.0k
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Answer: Answer: filter out low expressed RNA-seq genes using anova
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
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2.8k
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Answer: Answer: How to compare multiple microarray samples of small RNA expression from myeloid
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
1
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0
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2.6k
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Answer: A: Compare sample RNA-seq data with publicly available micro-array data
10.0 years ago by mark.ziemann ★ 2.0k
0
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1
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2.2k
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Answer: Answer: Tblastx returning only 400 hits
updated 2.2 years ago by 45k • written 10.0 years ago by ★ 2.0k
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0
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4.8k
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Answer: A: Is "paired reads have different names" error due to ! at beginning of line in fa
10.0 years ago by mark.ziemann ★ 2.0k
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0
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4.9k
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Answer: Answer: bwa aln calculate SA coordinate issue
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
3
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2
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5.4k
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Answer: A: Get all the translation start site for human genome
10.0 years ago by mark.ziemann ★ 2.0k
2
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0
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4.0k
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Comment: C: Linc and miRNA in GTF file
10.0 years ago by mark.ziemann ★ 2.0k
0
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1
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24k
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Answer: Answer: check if two columns match in 2 annotation files and print those lines to a new
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
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1
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2.0k
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Comment: Comment: The hard way?
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
2
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0
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1.7k
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Answer: Answer: Dealing with sequencing data annotations
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
2
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0
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4.1k
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Answer: Answer: Bacterial identification - PCR primers - unknown target
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
0
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1
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6.3k
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Answer: Answer: bedtools getfasta does not give a proper fasta output
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
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0
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2.6k
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Answer: Answer: Tissue specific major transcript expressed?
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
1
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1
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2.0k
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Answer: Answer: The hard way?
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
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0
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2.2k
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Answer: Answer: How to get gene names from tophat results
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
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0
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2.3k
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Comment: Comment: Annotation of miRNA targets
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
0
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1
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2.6k
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Comment: Comment: samll RNA-seq data preproccess （ clipping the adapter sequences, removing read
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
0
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1
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5.0k
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Comment: C: Count read with summarizeOverlaps result 0 for all sample
10.0 years ago by mark.ziemann ★ 2.0k
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0
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2.0k
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Answer: A: 5'adaptor trimming of microRNA sequence data
10.0 years ago by mark.ziemann ★ 2.0k
0
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1
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5.0k
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Comment: C: Count read with summarizeOverlaps result 0 for all sample
10.0 years ago by mark.ziemann ★ 2.0k
0
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0
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1.6k
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Comment: C: I am trying to find the homologs on ion channel genes in the sponge phylum.
10.0 years ago by mark.ziemann ★ 2.0k
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0
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2.5k
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Comment: Comment: Identify common genes and their respective DNA sequences
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
1
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1
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2.6k
views
Answer: Answer: samll RNA-seq data preproccess （ clipping the adapter sequences, removing read
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.0k
224 results • Page 4 of 5
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