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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
2 days ago by i.sudbery 19k
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352
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
3 days ago by i.sudbery 19k
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242
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Comment: Comment: featureCounts output summary assigned value higher than uniquely mapped reads fr
4 days ago by i.sudbery 19k
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352
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
5 days ago by i.sudbery 19k
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352
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
5 days ago by i.sudbery 19k
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1
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352
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
5 days ago by i.sudbery 19k
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369
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Answer: Answer: Understanding STAR output (Aligned.out.sam file)
6 days ago by i.sudbery 19k
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321
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Comment: Comment: How does gene length effect the number of reads mapped
9 days ago by i.sudbery 19k
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321
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Comment: Comment: How does gene length effect the number of reads mapped
10 days ago by i.sudbery 19k
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321
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Answer: Answer: How goes gene length effect the number of reads mapped
10 days ago by i.sudbery 19k
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386
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Answer: Answer: What purposes can TPM values be used for?
10 days ago by i.sudbery 19k
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196
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Comment: Comment: Alternatives to metanalyisis. P integration. Horiztonal integration RNA-seq
12 days ago by i.sudbery 19k
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2.1k
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Comment: Comment: NGS forensics: how to know if data is fabricated
13 days ago by i.sudbery 19k
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580
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Comment: Comment: Low mapping rate with Salmon
13 days ago by i.sudbery 19k
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2.1k
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Comment: Comment: NGS forensics: how to know if data is fabricated
14 days ago by i.sudbery 19k
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328
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Comment: Comment: ChIP-seq datasets: input samples omitted?
14 days ago by i.sudbery 19k
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158
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Answer: Answer: How to solve DESeq2 Error in checkFullRank(modelMatrix)?
14 days ago by i.sudbery 19k
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2.1k
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Comment: Comment: NGS forensics: how to know if data is fabricated
14 days ago by i.sudbery 19k
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2.1k
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Comment: Comment: NGS forensics: how to know if data is fabricated
14 days ago by i.sudbery 19k
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1
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580
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Comment: Comment: Low mapping rate with Salmon
16 days ago by i.sudbery 19k
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367
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Comment: Comment: what is the purpose of indexing the reference genome (Kallisto)
17 days ago by i.sudbery 19k
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410
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Comment: Comment: Ideal PC configurations and operating system for bioinformatics laboratory
19 days ago by i.sudbery 19k
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580
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Comment: Comment: Low mapping rate with Salmon
20 days ago by i.sudbery 19k
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521
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Comment: Comment: Marking duplicates using UMIs
21 days ago by i.sudbery 19k
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521
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Comment: Comment: Marking duplicates using UMIs
21 days ago by i.sudbery 19k
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261
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Answer: Answer: Trouble understanding seemingly contradicting results of GSE analysis (contradic
27 days ago by i.sudbery 19k
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1.2k
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Comment: Comment: How I know if it is a batch effect or are real differences between my controls a
4 weeks ago by i.sudbery 19k
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1.2k
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Answer: Answer: ¿How I know if it is a batch effect or are real differences between my controls
5 weeks ago by i.sudbery 19k
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461
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Comment: Comment: chromHMM annotations
5 weeks ago by i.sudbery 19k
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1
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461
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Answer: Answer: chromHMM annotations
5 weeks ago by i.sudbery 19k
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1
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446
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Comment: Comment: DESeq: too low p-value for RNAseq
5 weeks ago by i.sudbery 19k
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395
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Comment: Comment: Mathematical/Statistical models to predict mRNA half-life
8 weeks ago by i.sudbery 19k
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1
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470
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Answer: Answer: UMI_extract for paired end reads of micro_RNA
8 weeks ago by i.sudbery 19k
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202
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Answer: Answer: Detecting presence of UMI from BAM/fastq files without prior knowledge
8 weeks ago by i.sudbery 19k
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1
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547
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Answer: Answer: conda install -Killed
8 weeks ago by i.sudbery 19k
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376
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Answer: Answer: Is it feasible to merge Illumina RNA-Seq data with varying read lengths?
8 weeks ago by i.sudbery 19k
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218
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Comment: Comment: RNA-seq DE with AAV injection
8 weeks ago by i.sudbery 19k
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1
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688
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Comment: Comment: Difference between GLM and Wilcoxon rank sum test
9 weeks ago by i.sudbery 19k
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688
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Answer: Answer: Difference between GLM and Wilcoxon rank sum test
9 weeks ago by i.sudbery 19k
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581
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Comment: Comment: minimap2 gets killed, but it doesn't explain why
10 weeks ago by i.sudbery 19k
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284
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Answer: Answer: Error from cgat gtf2gtf --method=genes-to-unique-chunks
10 weeks ago by i.sudbery 19k
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0
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599
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Comment: Comment: Multiple unique reads sharing same UMI barcode
11 weeks ago by i.sudbery 19k
2
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1
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821
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Answer: Answer: How to interpret the output from a DESeq2 WALD test analysis in R to compare gen
11 weeks ago by i.sudbery 19k
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1
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599
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Comment: Comment: Multiple unique reads sharing same UMI barcode
11 weeks ago by i.sudbery 19k
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1
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599
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Comment: Comment: Multiple unique reads sharing same UMI barcode
11 weeks ago by i.sudbery 19k
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1
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393
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Answer: Answer: perplexed regarding the process of gene expression normalision
11 weeks ago by i.sudbery 19k
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0
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300
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Answer: Answer: Heteroscedasticity in RNA-seq data
12 weeks ago by i.sudbery 19k
2
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0
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661
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Answer: Answer: question on how differential expression is affected if there is differential abu
12 weeks ago by i.sudbery 19k
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422
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Comment: Comment: Enrichment Analysis with Fisher's exact test
12 weeks ago by i.sudbery 19k
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2
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422
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Answer: Answer: Enrichment Analysis with Fisher's exact test
12 weeks ago by i.sudbery 19k
1,504 results • Page 1 of 31
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