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Comment: Comment: Ideal PC configurations and operating system for bioinformatics laboratory
6 months ago by i.sudbery 20k
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646
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Answer: Answer: How do we do quantification using stringtie merge option for all the merged samp
6 months ago by i.sudbery 20k
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357
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Answer: Answer: How to interpret this plotMDS of three disease clusters?
6 months ago by i.sudbery 20k
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Comment: Comment: Ideal PC configurations and operating system for bioinformatics laboratory
6 months ago by i.sudbery 20k
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461
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Comment: Comment: Problem with Calling Variants from RNA-Seq data
6 months ago by i.sudbery 20k
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442
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Answer: Answer: Biomart issue, why so few 3'utrs?
6 months ago by i.sudbery 20k
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442
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Comment: Comment: Biomart issue, why so few 3'utrs?
6 months ago by i.sudbery 20k
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1.2k
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Answer: Answer: UMI-Tools knee-method has great influence on the results of white list
6 months ago by i.sudbery 20k
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1.2k
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
6 months ago by i.sudbery 20k
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861
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Comment: Comment: featureCounts output summary assigned value higher than uniquely mapped reads fr
6 months ago by i.sudbery 20k
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1.2k
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
6 months ago by i.sudbery 20k
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1.2k
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
6 months ago by i.sudbery 20k
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1.2k
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
6 months ago by i.sudbery 20k
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1
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1.1k
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Answer: Answer: Understanding STAR output (Aligned.out.sam file)
6 months ago by i.sudbery 20k
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1
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783
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Comment: Comment: How does gene length effect the number of reads mapped
6 months ago by i.sudbery 20k
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2
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783
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Comment: Comment: How does gene length effect the number of reads mapped
6 months ago by i.sudbery 20k
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783
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Answer: Answer: How goes gene length effect the number of reads mapped
6 months ago by i.sudbery 20k
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1.6k
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Answer: Answer: What purposes can TPM values be used for?
6 months ago by i.sudbery 20k
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317
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Comment: Comment: Alternatives to metanalyisis. P integration. Horiztonal integration RNA-seq
6 months ago by i.sudbery 20k
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3.3k
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Comment: Comment: NGS forensics: how to know if data is fabricated
7 months ago by i.sudbery 20k
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1.4k
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Comment: Comment: Low mapping rate with Salmon
7 months ago by i.sudbery 20k
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1
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3.3k
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Comment: Comment: NGS forensics: how to know if data is fabricated
7 months ago by i.sudbery 20k
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572
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Comment: Comment: ChIP-seq datasets: input samples omitted?
7 months ago by i.sudbery 20k
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378
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Answer: Answer: How to solve DESeq2 Error in checkFullRank(modelMatrix)?
7 months ago by i.sudbery 20k
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1
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3.3k
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Comment: Comment: NGS forensics: how to know if data is fabricated
7 months ago by i.sudbery 20k
1
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0
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3.3k
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Comment: Comment: NGS forensics: how to know if data is fabricated
7 months ago by i.sudbery 20k
0
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1
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1.4k
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Comment: Comment: Low mapping rate with Salmon
7 months ago by i.sudbery 20k
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0
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632
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Comment: Comment: what is the purpose of indexing the reference genome (Kallisto)
7 months ago by i.sudbery 20k
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1.8k
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Comment: Comment: Ideal PC configurations and operating system for bioinformatics laboratory
7 months ago by i.sudbery 20k
0
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1
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1.4k
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Comment: Comment: Low mapping rate with Salmon
7 months ago by i.sudbery 20k
1
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0
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867
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Comment: Comment: Marking duplicates using UMIs
7 months ago by i.sudbery 20k
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1
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867
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Comment: Comment: Marking duplicates using UMIs
7 months ago by i.sudbery 20k
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454
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Answer: Answer: Trouble understanding seemingly contradicting results of GSE analysis (contradic
7 months ago by i.sudbery 20k
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1.8k
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Comment: Comment: How I know if it is a batch effect or are real differences between my controls a
7 months ago by i.sudbery 20k
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1
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1.8k
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Answer: Answer: ¿How I know if it is a batch effect or are real differences between my controls
7 months ago by i.sudbery 20k
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1
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831
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Comment: Comment: chromHMM annotations
7 months ago by i.sudbery 20k
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1
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831
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Answer: Answer: chromHMM annotations
7 months ago by i.sudbery 20k
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842
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Comment: Comment: DESeq: too low p-value for RNAseq
7 months ago by i.sudbery 20k
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613
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Comment: Comment: Mathematical/Statistical models to predict mRNA half-life
8 months ago by i.sudbery 20k
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1
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790
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Answer: Answer: UMI_extract for paired end reads of micro_RNA
8 months ago by i.sudbery 20k
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0
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420
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Answer: Answer: Detecting presence of UMI from BAM/fastq files without prior knowledge
8 months ago by i.sudbery 20k
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1
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1.7k
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Answer: Answer: conda install -Killed
8 months ago by i.sudbery 20k
1
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0
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628
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Answer: Answer: Is it feasible to merge Illumina RNA-Seq data with varying read lengths?
8 months ago by i.sudbery 20k
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352
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Comment: Comment: RNA-seq DE with AAV injection
8 months ago by i.sudbery 20k
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1
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1.4k
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Comment: Comment: Difference between GLM and Wilcoxon rank sum test
8 months ago by i.sudbery 20k
4
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1.4k
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Answer: Answer: Difference between GLM and Wilcoxon rank sum test
8 months ago by i.sudbery 20k
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1.2k
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Comment: Comment: minimap2 gets killed, but it doesn't explain why
9 months ago by i.sudbery 20k
2
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1
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447
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Answer: Answer: Error from cgat gtf2gtf --method=genes-to-unique-chunks
9 months ago by i.sudbery 20k
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0
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906
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Comment: Comment: Multiple unique reads sharing same UMI barcode
9 months ago by i.sudbery 20k
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1.4k
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Answer: Answer: How to interpret the output from a DESeq2 WALD test analysis in R to compare gen
9 months ago by i.sudbery 20k
1,611 results • Page 3 of 33
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