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2
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Comment: Comment: Log2 transformation is well used, but is there a good paper that can be used as
10 months ago by i.sudbery 20k
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0
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1.2k
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Comment: Comment: How to define the density (or something else) of B in the sequence, considering
10 months ago by i.sudbery 20k
3
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1
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752
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Comment: Comment: Doublechecking enrichment of promoters of DE genes
10 months ago by i.sudbery 20k
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1.2k
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Comment: Comment: installing DESeq2 on Windows
updated 10 months ago by 44k • written 11 months ago by 20k
1
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0
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803
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Answer: Answer: Do batches contain biological variations in omics data (RNAseq or scRNAseq)?
updated 11 months ago by 44k • written 11 months ago by 20k
3
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1
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1.2k
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Answer: Answer: installing DESeq2 on Windows
11 months ago by i.sudbery 20k
1
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0
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3.8k
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Comment: Comment: What apps can read large FASTQ files on Windows?
11 months ago by i.sudbery 20k
1
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1
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3.8k
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Answer: Answer: What apps can read large FASTQ files on Windows?
11 months ago by i.sudbery 20k
1
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1
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851
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Answer: Answer: Best method for batch correction of three datasets
updated 11 months ago by 85k • written 11 months ago by 20k
0
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0
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1.2k
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Comment: Comment: p-value combination methods
12 months ago by i.sudbery 20k
1
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1
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1.2k
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Comment: Comment: p-value combination methods
12 months ago by i.sudbery 20k
0
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0
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560
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Answer: Answer: multiple condition and time course in RNA-seq
12 months ago by i.sudbery 20k
2
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1
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1.1k
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Comment: Comment: Downstream analysis with DEseq2 normalization
12 months ago by i.sudbery 20k
2
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0
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898
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Answer: Answer: Does DESeq2 correct for library size when importing the counts with DESeqDataSet
12 months ago by i.sudbery 20k
0
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0
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1.2k
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Comment: Comment: Command line or python RNA-seq read simulator
12 months ago by i.sudbery 20k
0
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0
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1.2k
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Comment: Comment: Command line or python RNA-seq read simulator
12 months ago by i.sudbery 20k
0
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0
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1.2k
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Comment: Comment: Command line or python RNA-seq read simulator
12 months ago by i.sudbery 20k
1
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1
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1.8k
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Comment: Comment: Is my data too noisy for DESeq? Should I model noise as unwanted variation?
12 months ago by i.sudbery 20k
0
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2
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1.2k
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Comment: Comment: Command line or python RNA-seq read simulator
12 months ago by i.sudbery 20k
1
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9
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1.2k
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Command line or python RNA-seq read simulator
simulation RNA-seq
12 months ago by i.sudbery 20k
3
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1
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1.8k
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Answer: Answer: Is my data too noisy for DESeq? Should I model noise as unwanted variation?
12 months ago by i.sudbery 20k
0
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1
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1.8k
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Comment: Comment: Is my data too noisy for DESeq? Should I model noise as unwanted variation?
12 months ago by i.sudbery 20k
0
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0
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720
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Comment: Comment: Cross validate RNA-seq and ATAC-seq
13 months ago by i.sudbery 20k
0
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0
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841
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Comment: Comment: Why my GWAS p-value QQ-plot is far above diagonal
13 months ago by i.sudbery 20k
0
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4
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1.7k
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Answer: Answer: Dealing with transcriptome sequences that are smaller than their respective gene
14 months ago by i.sudbery 20k
3
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1
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2.2k
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Answer: Answer: Annotating TSS: By Transcript or by Gene? Code Validation Help Needed!
14 months ago by i.sudbery 20k
1
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1
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776
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Comment: Comment: What is "intersectional genetic strategy"? How does it work? What can it do?
14 months ago by i.sudbery 20k
1
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1
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1.1k
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Answer: Answer: From where can I obtain vcf files of healthy exomes
14 months ago by i.sudbery 20k
1
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0
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1.8k
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Answer: Answer: Is Bioinformatics a Professional Degree?
15 months ago by i.sudbery 20k
4
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1
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1.4k
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Answer: Answer: Can one sample t.test be used to determine statistical significance for log2FC v
15 months ago by i.sudbery 20k
0
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0
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1.8k
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Comment: Comment: Formatting RNA-Seq Data for Kruskal Wallis Test on R
15 months ago by i.sudbery 20k
0
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0
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1.2k
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Comment: Comment: Understaning the result of Meta-analysis of differential expression across datas
15 months ago by i.sudbery 20k
0
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1
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1.2k
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Comment: Comment: Understaning the result of Meta-analysis of differential expression across datas
15 months ago by i.sudbery 20k
0
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1
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1.2k
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Answer: Answer: Understaning the result of Meta-analysis of differential expression across datas
15 months ago by i.sudbery 20k
0
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1
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1.2k
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Comment: Comment: Understaning the result of Meta-analysis of differential expression across datas
15 months ago by i.sudbery 20k
0
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1
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1.2k
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Comment: Comment: Understaning the result of Meta-analysis of differential expression across datas
15 months ago by i.sudbery 20k
4
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2
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1.3k
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Answer: Answer: RSEM uses different gene lengths for each sample.
15 months ago by i.sudbery 20k
1
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0
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2.6k
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Comment: Comment: UMI deduplication and output
16 months ago by i.sudbery 20k
1
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1
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1.1k
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Comment: Comment: Should we assume UMI-based scRNAseq data is not compositional?
16 months ago by i.sudbery 20k
0
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1
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1.1k
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Comment: Comment: Should we assume UMI-based scRNAseq data is not compositional?
16 months ago by i.sudbery 20k
0
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0
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1.6k
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Comment: Comment: Umi dedup with fastp
16 months ago by i.sudbery 20k
0
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1
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928
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Answer: Answer: Quantification of allele-specific gene expression in RNA-seq
16 months ago by i.sudbery 20k
3
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1
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762
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Comment: Comment: Optimal Over Representation Analysis DE genes foldFC threshold?
16 months ago by i.sudbery 20k
0
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1
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1.6k
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Answer: Answer: Umi dedup with fastp
16 months ago by i.sudbery 20k
0
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0
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1.7k
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Comment: Comment: losing many genes while doing DGE on the RNAseq data due to read count threshold
16 months ago by i.sudbery 20k
2
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0
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2.6k
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Answer: Answer: Don't choose Novogene for your sequencing projects
16 months ago by i.sudbery 20k
1
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1
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1.7k
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Answer: Answer: losing many genes while doing DGE on the RNAseq data due to read count threshold
16 months ago by i.sudbery 20k
2
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1
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1.8k
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Answer: Answer: How to allocate memory and CPU without SLURM in a linux cluster?
16 months ago by i.sudbery 20k
2
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0
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1.0k
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Comment: Comment: correlation plot, FDR value
16 months ago by i.sudbery 20k
0
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1
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1.0k
views
Answer: Answer: correlation plot, FDR value
16 months ago by i.sudbery 20k
1,611 results • Page 5 of 33
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