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Comment: Comment: DESeq2 error while using apeglm - optimHess
2.2 years ago by Kumar ▴ 170
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0
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583
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How do we know that the AMR genes/ MGEs in the contig sequence is on plasmid or Chromosome?
bacteria plasmid
updated 2.3 years ago by 45k • written 2.3 years ago by ▴ 170
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0
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1.5k
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Comment: Comment: How to download coronavirus genomes and its metadata file in only animals
2.6 years ago by Kumar ▴ 170
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0
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1.5k
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Comment: Comment: How to download coronavirus genomes and its metadata file in only animals
2.6 years ago by Kumar ▴ 170
1
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6
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1.5k
views
How to download coronavirus genomes and its metadata file in only animals
coronavirus NCBI metadata Genome
updated 2.6 years ago by ▴ 800 • written 2.6 years ago by ▴ 170
11
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9
replies
6.2k
views
6 follow
How to run STAR with multiple files
alignment rna-seq SRAT-aligner
updated 2.7 years ago by ★ 4.4k • written 4.7 years ago by ▴ 170
2
votes
1
reply
965
views
How to make a phylogenetic tree using numerical values
phylogenetic phylip tree mlst genome
updated 2.7 years ago by ▴ 930 • written 2.8 years ago by ▴ 170
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0
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564
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How to make phylogenetic using binary data
binary sequence phylogenetic tree
2.8 years ago by Kumar ▴ 170
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0
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530
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How to run logisticPCA on binary data
Binary genome PCA logisticPCA
2.8 years ago by Kumar ▴ 170
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0
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682
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hierBAPS for hierarchical clusters?
R SNP rhierbaps
2.9 years ago by Kumar ▴ 170
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1
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1.4k
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Comment: Comment: Combine metadata
2.9 years ago by Kumar ▴ 170
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1
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1.4k
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Comment: Comment: Combine metadata
2.9 years ago by Kumar ▴ 170
0
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1
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1.4k
views
Comment: Comment: Combine metadata
2.9 years ago by Kumar ▴ 170
0
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8
replies
1.4k
views
Combine metadata
python metadata genome
updated 2.9 years ago by 45k • written 2.9 years ago by ▴ 170
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1
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1.4k
views
Comment: Comment: How to make a dataset of machine learning model for predicting antibiotic resist
3.1 years ago by Kumar ▴ 170
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3
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1.4k
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How to make a dataset of machine learning model for predicting antibiotic resistant?
learning bacteria antibiotic machine resistant
updated 3.1 years ago by ★ 29k • written 3.1 years ago by ▴ 170
1
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3
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1.2k
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How to run Trimmomatic with multiple files in a loop
Trimmomatic fastq trimming
updated 3.2 years ago by ★ 29k • written 3.2 years ago by ▴ 170
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0
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1.8k
views
Comment: Comment: How to run Unicycler for hybrid assembly with multiple samples
3.2 years ago by Kumar ▴ 170
1
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2
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1.8k
views
How to run Unicycler for hybrid assembly with multiple samples
assembly fastq Unicycler bacteria
3.2 years ago by Kumar ▴ 170
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0
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1.0k
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Comment: Comment: How to illustrate positions (start and stop) of the genes in graphical view
3.3 years ago by Kumar ▴ 170
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1
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1.6k
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Comment: Comment: Microbial community analysis pipelines in metagenomics
3.3 years ago by Kumar ▴ 170
0
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2
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1.0k
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How to illustrate positions (start and stop) of the genes in graphical view
Genes-regions genome positions
3.3 years ago by Kumar ▴ 170
0
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0
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5.9k
views
Answer: Answer: problem in launching prokka
3.3 years ago by Kumar ▴ 170
2
votes
11
replies
3.4k
views
how to run seqkit in a loop with multiple files
seqkit scaffolds python
3.3 years ago by Kumar ▴ 170
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0
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3.4k
views
Comment: Comment: how to run seqkit in a loop with multiple files
3.3 years ago by Kumar ▴ 170
0
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2
replies
3.4k
views
Comment: Comment: how to run seqkit in a loop with multiple files
3.3 years ago by Kumar ▴ 170
0
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1
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3.4k
views
Comment: Comment: how to run seqkit in a loop with multiple files
3.3 years ago by Kumar ▴ 170
1
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1
reply
2.7k
views
Comment: Comment: Bacterial genome hybrid assembly
3.3 years ago by Kumar ▴ 170
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1
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2.9k
views
Comment: Comment: How to make circularize genome assembly after polishing
3.3 years ago by Kumar ▴ 170
0
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0
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2.7k
views
Comment: Comment: Bacterial genome hybrid assembly
3.4 years ago by Kumar ▴ 170
0
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3
replies
2.9k
views
How to make circularize genome assembly after polishing
Assembly Genome Flye assember Pilon
updated 3.3 years ago by 3.9k • written 3.4 years ago by ▴ 170
1
vote
1
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824
views
How to perform multiple sequence alignment with large nucleotide sequence
genome multiple sequence alignment nucleotide
updated 3.4 years ago by 152k • written 3.4 years ago by ▴ 170
0
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0
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4.3k
views
Comment: Comment: Hybrid assembly SPAdes (Ox. Nanopore + Illumina)
3.5 years ago by Kumar ▴ 170
0
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1
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1.5k
views
Comment: Comment: How to assemble viral genome using MIRA assembler
3.5 years ago by Kumar ▴ 170
0
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3
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1.5k
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How to assemble viral genome using MIRA assembler
assembly MIRA virus Genome
updated 3.5 years ago by 102k • written 3.5 years ago by ▴ 170
0
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1
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3.1k
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Comment: Comment: How to make hybrid assembly of a viral genome
3.5 years ago by Kumar ▴ 170
0
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1
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3.1k
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Comment: Comment: How to make hybrid assembly of a viral genome
3.5 years ago by Kumar ▴ 170
0
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1
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3.1k
views
Comment: Comment: How to make hybrid assembly of a viral genome
3.5 years ago by Kumar ▴ 170
0
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1
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3.1k
views
Comment: Comment: How to make hybrid assembly of a viral genome
3.5 years ago by Kumar ▴ 170
0
votes
9
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3.1k
views
How to make hybrid assembly of a viral genome
Virus Illumina Hybrid Genome assembly MinION
updated 3.5 years ago by ★ 2.4k • written 3.5 years ago by ▴ 170
0
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0
replies
1.6k
views
Comment: Comment: How to assemble a genome from scaffolds to Chromosome level
3.5 years ago by Kumar ▴ 170
0
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1
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1.6k
views
Comment: Comment: How to assemble a genome from scaffolds to Chromosome level
3.5 years ago by Kumar ▴ 170
0
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0
replies
1.4k
views
Comment: Comment: How to calculate distance matrix and phylogenetic tree for genome alignment
3.5 years ago by Kumar ▴ 170
0
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2
replies
1.4k
views
How to calculate distance matrix and phylogenetic tree for genome alignment
distance phylogenetic Genome tree matrix
3.5 years ago by Kumar ▴ 170
0
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1
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3.5k
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Comment: Comment: How to download all accession ID of CDS from all viral genome
3.6 years ago by Kumar ▴ 170
0
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1
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3.5k
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Comment: Comment: How to download all accession ID of CDS from all viral genome
3.6 years ago by Kumar ▴ 170
0
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1
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3.5k
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Comment: Comment: How to download all accession ID of CDS from all viral genome
3.6 years ago by Kumar ▴ 170
0
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1
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3.5k
views
Comment: Comment: How to download all accession ID of CDS from all viral genome
3.6 years ago by Kumar ▴ 170
0
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14
replies
3.5k
views
How to download all accession ID of CDS from all viral genome
genome accession viral NCBI nucleotide
updated 3.6 years ago by 152k • written 3.6 years ago by ▴ 170
0
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0
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3.5k
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Comment: Comment: How to download all accession ID of CDS from all viral genome
3.6 years ago by Kumar ▴ 170
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