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748
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Comment:
Comment: VarDict in paired end mode with GATK preprocessing
22 months ago by
kulvait
▴ 270
0
votes
2
replies
748
views
VarDict in paired end mode with GATK preprocessing
vardict
exomeseq
variant
discovery
22 months ago by
kulvait
▴ 270
18
votes
7
replies
12k
views
Determine sex from vcf file (or sequencing data)
variant
genotyping
vcf
updated 2.7 years ago by
ashotmarg2004
▴ 130 • written 8.5 years ago by
kulvait
▴ 270
3
votes
8
replies
2.6k
views
For bam and mutation signature I need coverage and number of observations
next-gen
vcf
bam
updated 7.3 years ago by
cpad0112
21k • written 8.1 years ago by
kulvait
▴ 270
3
votes
2
replies
1.5k
views
Strip primer sequences from sequencing reads
DNA-seq
amplicon-seq
BAM
updated 7.3 years ago by
Robert Sicko
▴ 630 • written 7.3 years ago by
kulvait
▴ 270
0
votes
1
reply
2.2k
views
Comment:
C: Finding sample swaps using VCF files
7.3 years ago by
kulvait
▴ 270
2
votes
4
replies
2.2k
views
Finding sample swaps using VCF files
dna-seq
amplicon-seq
vcf
7.3 years ago by
kulvait
▴ 270
0
votes
0
replies
1.9k
views
Comment:
C: Weird alignments in amplicon sequencing
8.0 years ago by
kulvait
▴ 270
1
vote
0
replies
2.6k
views
Comment:
C: For bam and mutation signature I need coverage and number of observations
8.0 years ago by
kulvait
▴ 270
0
votes
1
reply
2.6k
views
Comment:
C: For bam and mutation signature I need coverage and number of observations
8.0 years ago by
kulvait
▴ 270
0
votes
2
replies
2.6k
views
Comment:
A: For bam and mutation signature I need coverage and number of observations
8.0 years ago by
kulvait
▴ 270
0
votes
0
replies
2.7k
views
Comment:
C: IndelRealigner and RealignerTargetCreator for amplicon sequencing
8.1 years ago by
kulvait
▴ 270
0
votes
0
replies
2.7k
views
Comment:
C: IndelRealigner and RealignerTargetCreator for amplicon sequencing
8.1 years ago by
kulvait
▴ 270
3
votes
4
replies
2.7k
views
IndelRealigner and RealignerTargetCreator for amplicon sequencing
amplicon-seq
NGS
indel
updated 8.1 years ago by
WouterDeCoster
47k • written 8.1 years ago by
kulvait
▴ 270
0
votes
2
replies
1.9k
views
Weird alignments in amplicon sequencing
amplicon-seq
sequencing
myeloid
8.1 years ago by
kulvait
▴ 270
0
votes
0
replies
6.4k
views
Comment:
C: samtools v1.3: AD, ADF and ADR fields
8.5 years ago by
kulvait
▴ 270
2
votes
1
reply
2.4k
views
Answer:
A: Does the order of the RMA algorithm make a difference in results?
8.5 years ago by
kulvait
▴ 270
0
votes
1
reply
2.1k
views
Comment:
C: Genome assembly process
8.5 years ago by
kulvait
▴ 270
6
votes
0
replies
12k
views
Answer:
A: Determine sex from vcf file (or sequencing data)
8.5 years ago by
kulvait
▴ 270
3
votes
0
replies
12k
views
Answer:
A: Determine sex from vcf file (or sequencing data)
8.5 years ago by
kulvait
▴ 270
1
vote
9
replies
2.1k
views
Genome assembly process
DNA
updated 8.5 years ago by
lh3
33k • written 8.5 years ago by
kulvait
▴ 270
0
votes
0
replies
2.1k
views
Comment:
C: Genome assembly process
8.5 years ago by
kulvait
▴ 270
0
votes
0
replies
12k
views
Comment:
C: Determine sex from vcf file (or sequencing data)
8.5 years ago by
kulvait
▴ 270
0
votes
0
replies
4.3k
views
Comment:
C: Remove duplicates from exome sequencing data
8.6 years ago by
kulvait
▴ 270
2
votes
1
reply
4.3k
views
Answer:
A: Remove duplicates from exome sequencing data
8.6 years ago by
kulvait
▴ 270
9
votes
9
replies
4.3k
views
Remove duplicates from exome sequencing data
variants sequencing
exome-seq
8.6 years ago by
kulvait
▴ 270
1
vote
1
reply
4.3k
views
Comment:
C: Remove duplicates from exome sequencing data
8.6 years ago by
kulvait
▴ 270
9
votes
9
replies
2.5k
views
How to parse info field in Excel
sequencing
updated 8.6 years ago by
Sinji
★ 3.2k • written 8.6 years ago by
kulvait
▴ 270
0
votes
1
reply
2.5k
views
Comment:
C: How to parse info field in Excel
8.6 years ago by
kulvait
▴ 270
0
votes
1
reply
2.5k
views
Comment:
C: How to parse info field in Excel
8.6 years ago by
kulvait
▴ 270
0
votes
0
replies
1.7k
views
SnpEff protein_protein_contact annotation
SNP
ngs
8.7 years ago by
kulvait
▴ 270
0
votes
0
replies
8.3k
views
Answer:
A: Variant caller for low frequency variants
8.7 years ago by
kulvait
▴ 270
1
vote
6
replies
6.2k
views
Filtering bam files generated by bwa mem
next-gen
sequencing
SNP
8.7 years ago by
kulvait
▴ 270
0
votes
0
replies
6.2k
views
Answer:
A: Filtering bam files generated by bwa mem
8.7 years ago by
kulvait
▴ 270
9
votes
7
replies
8.3k
views
Variant caller for low frequency variants
NGS
8.7 years ago by
kulvait
▴ 270
0
votes
0
replies
6.2k
views
Comment:
C: Filtering bam files generated by bwa mem
8.7 years ago by
kulvait
▴ 270
0
votes
0
replies
9.4k
views
Answer:
Answer: bcftools: invalid option -- b was showed error
updated 2.7 years ago by
Ram
44k • written 8.7 years ago by
kulvait
▴ 270
0
votes
1
reply
8.3k
views
Comment:
A: Variant caller for low frequency variants
8.7 years ago by
kulvait
▴ 270
1
vote
0
replies
3.8k
views
Answer:
A: How Could I Handle Bed Files In Java?
updated 9.5 years ago by
PoGibas
5.1k • written 9.5 years ago by
kulvait
▴ 270
2
votes
1
reply
1.6k
views
Dealing with sequencing data annotations
sequencing
annotation
updated 2.4 years ago by
Ram
44k • written 9.6 years ago by
kulvait
▴ 270
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