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8
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19
replies
4.6k
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Make multi-fasta using perl
perl multi-fasta fasta
updated 21 months ago by 44k • written 9.6 years ago by ▴ 140
0
votes
1
reply
9.7k
views
Answer: A: Parallelized mpileup script
updated 5.1 years ago by 44k • written 9.3 years ago by ▴ 140
0
votes
2
replies
3.9k
views
GATK DP filter for multiple samples
gatk snps
updated 6.0 years ago by • 0 • written 8.3 years ago by ▴ 140
5
votes
4
replies
4.6k
views
more than one annotation at a locus in SnpEff output?
snpeff
updated 6.3 years ago by ▴ 20 • written 7.8 years ago by ▴ 140
0
votes
0
replies
3.9k
views
Comment: C: convert GFF to GTF?
7.8 years ago by sun.nation ▴ 140
3
votes
3
replies
3.9k
views
convert GFF to GTF?
gff gtf
7.8 years ago by sun.nation ▴ 140
0
votes
0
replies
2.5k
views
Comment: C: How to find % alignment of total reads to genic region?
8.3 years ago by sun.nation ▴ 140
2
votes
3
replies
2.5k
views
How to find % alignment of total reads to genic region?
alignment gff bowtie
updated 8.3 years ago by ★ 1.3k • written 8.3 years ago by ▴ 140
1
vote
0
replies
1.4k
views
Comparative genome analysis of a species from different hosts?
comparative genomics SNPs
8.3 years ago by sun.nation ▴ 140
0
votes
0
replies
2.8k
views
Comment: C: vcftools DP filter error
8.3 years ago by sun.nation ▴ 140
0
votes
2
replies
2.8k
views
vcftools DP filter error
vcftools
updated 8.3 years ago by ★ 3.8k • written 8.3 years ago by ▴ 140
0
votes
0
replies
7.7k
views
Comment: C: Fastest way to search barcode string with two mismatches in fastq file using per
8.5 years ago by sun.nation ▴ 140
1
vote
1
reply
7.7k
views
Comment: C: Fastest way to search barcode string with two mismatches in fastq file using per
8.5 years ago by sun.nation ▴ 140
1
vote
1
reply
7.7k
views
Comment: C: Fastest way to search barcode string with two mismatches in fastq file using per
8.5 years ago by sun.nation ▴ 140
0
votes
0
replies
7.7k
views
Comment: C: Fastest way to search barcode string with two mismatches in fastq file using per
8.5 years ago by sun.nation ▴ 140
0
votes
1
reply
7.7k
views
Comment: C: Fastest way to search barcode string with two mismatches in fastq file using per
8.5 years ago by sun.nation ▴ 140
15
votes
29
replies
7.7k
views
Fastest way to search barcode string with two mismatches in fastq file using perl?
perl fastq barcode demultiplex
updated 8.5 years ago by 13k • written 8.5 years ago by ▴ 140
1
vote
0
replies
7.7k
views
Comment: C: Fastest way to search barcode string with two mismatches in fastq file using per
8.5 years ago by sun.nation ▴ 140
0
votes
1
reply
7.7k
views
Comment: C: Fastest way to search barcode string with two mismatches in fastq file using per
8.5 years ago by sun.nation ▴ 140
0
votes
1
reply
7.7k
views
Comment: C: Fastest way to search barcode string with two mismatchs in fastq file using perl
8.5 years ago by sun.nation ▴ 140
0
votes
0
replies
7.7k
views
Comment: C: Fastest way to search barcode string with two mismatchs in fastq file using perl
8.5 years ago by sun.nation ▴ 140
0
votes
1
reply
7.7k
views
Comment: C: Fastest way to search barcode string with two mismatchs in fastq file using perl
8.5 years ago by sun.nation ▴ 140
0
votes
0
replies
7.7k
views
Comment: C: Fastest way to search barcode string with two mismatchs in fastq file using perl
8.5 years ago by sun.nation ▴ 140
0
votes
0
replies
1.3k
views
How to make pairwire genetic similarity heatmap for phylogetic analysis?
heatmap phylogenetics
8.7 years ago by sun.nation ▴ 140
0
votes
0
replies
1.6k
views
Comment: C: abyss de novo asssembly exited on signal 9 error
8.7 years ago by sun.nation ▴ 140
0
votes
0
replies
1.6k
views
Comment: C: abyss de novo asssembly exited on signal 9 error
8.7 years ago by sun.nation ▴ 140
0
votes
4
replies
1.6k
views
abyss de novo asssembly exited on signal 9 error
abyss de novo assembly
updated 8.7 years ago by 147k • written 8.7 years ago by ▴ 140
0
votes
0
replies
2.9k
views
Comment: C: How to align illumina genomic reads of one species to reference genome of other
9.1 years ago by sun.nation ▴ 140
0
votes
1
reply
2.9k
views
Comment: C: How to align illumina reads of one species to reference genome of other species
9.1 years ago by sun.nation ▴ 140
2
votes
7
replies
2.9k
views
How to align illumina genomic reads of one species to reference genome of other species with loose settings in bowtie2?
bowtie2
updated 2.3 years ago by 44k • written 9.1 years ago by ▴ 140
0
votes
0
replies
4.6k
views
Comment: C: paired end quality filtering
9.3 years ago by sun.nation ▴ 140
2
votes
4
replies
4.6k
views
paired end quality filtering
paired end illumina fastq filter
updated 2.2 years ago by 44k • written 9.3 years ago by ▴ 140
1
vote
1
reply
6.0k
views
vcf SNP file minor allele frequency filter?
vcf minor-allele SNP vcftools
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 140
0
votes
0
replies
3.8k
views
Comment: C: How can I filter SNP for 30 samples in vcf files?
9.3 years ago by sun.nation ▴ 140
0
votes
2
replies
3.8k
views
Comment: Comment: How can I filter SNP for 30 samples in vcf files?
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 140
3
votes
7
replies
3.8k
views
How can I filter SNP for 30 samples in vcf files?
vcf snp filtering
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 140
0
votes
0
replies
3.8k
views
Comment: Comment: How can I filter SNP for 30 samples in vcf files?
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 140
0
votes
0
replies
2.7k
views
Comment: Comment: Extract variant positions from single sample VCFs prior to merging ?
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 140
0
votes
1
reply
1.7k
views
phylogenetic analysis: 2.5 millions SNPs in 33 samples?
phylogenetic SNP
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 140
2
votes
6
replies
5.7k
views
Make fasta file from SNPs in two vcf files
fasta vcf phylogenetic SNP
updated 22 months ago by 44k • written 9.6 years ago by ▴ 140
0
votes
1
reply
5.1k
views
Convert exonerate output to EVM gff3 format error
evidencemodeler evm gff3 exonerate
updated 22 months ago by 44k • written 9.6 years ago by ▴ 140
0
votes
1
reply
5.7k
views
Comment: C: Make fasta file from SNPs in two vcf files
9.6 years ago by sun.nation ▴ 140
0
votes
0
replies
5.7k
views
Comment: Comment: Make fasta file from SNPs in two vcf files
updated 22 months ago by 44k • written 9.6 years ago by ▴ 140
0
votes
0
replies
4.6k
views
Comment: C: Make multi-fasta using perl
9.6 years ago by sun.nation ▴ 140
0
votes
0
replies
4.6k
views
Comment: C: Make multi-fasta using perl
9.6 years ago by sun.nation ▴ 140
0
votes
0
replies
4.6k
views
Comment: C: Make multi-fasta using perl
9.6 years ago by sun.nation ▴ 140
0
votes
1
reply
4.6k
views
Comment: Comment: Make multi-fasta using perl
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 140
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