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Answer: Answer: Discrepancy between Log2(x) and Log2(x+1) regarding Log2FC
20 months ago by Steven Lakin ★ 1.8k
3
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0
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911
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Answer: Answer: Can I compare RNAseq data from two different studies statistically?
3.0 years ago by Steven Lakin ★ 1.8k
4
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1
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1.0k
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Answer: Answer: Uneven Biological Replicates for 16S rRNA metabarcoding analysis: Is it justifia
3.0 years ago by Steven Lakin ★ 1.8k
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3.9k
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Answer: Answer: BWA alignment score calculation
3.5 years ago by Steven Lakin ★ 1.8k
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2.3k
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Answer: Answer: Correcting for multiple testing: 12 multiple regressions, with several covariate
3.5 years ago by Steven Lakin ★ 1.8k
3
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1
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2.6k
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Answer: Answer: [CONCEPTUAL] Mutant analysis - should the t-test be paired or unpaired?
3.5 years ago by Steven Lakin ★ 1.8k
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5.0k
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Comment: Comment: fixed effect vs random effects RNA analysis
3.5 years ago by Steven Lakin ★ 1.8k
2
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1
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900
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Answer: Answer: Correlation genes in multiple scRNA-seq
3.5 years ago by Steven Lakin ★ 1.8k
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1
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1.4k
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Answer: Answer: Nanopore Preprocessing Step
3.5 years ago by Steven Lakin ★ 1.8k
5
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1
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5.0k
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Comment: Comment: fixed effect vs random effects RNA analysis
3.5 years ago by Steven Lakin ★ 1.8k
7
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2
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5.0k
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Answer: Answer: fixed effect vs random effects RNA analysis
3.5 years ago by Steven Lakin ★ 1.8k
2
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0
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8.0k
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Answer: A: Splitting a large FASTA file into smaller FASTA files by Scaffolds
updated 5.0 years ago by 44k • written 9.4 years ago by ★ 1.8k
2
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2
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7.3k
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Answer: Answer: Log-transformed RNA-Seq data and linear regression
updated 23 months ago by 44k • written 9.4 years ago by ★ 1.8k
1
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0
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2.4k
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Comment: C: RNA-Seq expression analysis of heterogeneous data (cancer+healthy cells)
7.8 years ago by Steven Lakin ★ 1.8k
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1
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2.4k
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Answer: A: RNA-Seq expression analysis of heterogeneous data (cancer+healthy cells)
7.9 years ago by Steven Lakin ★ 1.8k
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9.9k
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Comment: C: Multivariable linear regression using Limma package; Model Matrix design
7.9 years ago by Steven Lakin ★ 1.8k
1
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0
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9.9k
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Comment: C: Multivariable linear regression using Limma package; Model Matrix design
7.9 years ago by Steven Lakin ★ 1.8k
0
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1
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9.9k
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Comment: C: Multivariable linear regression using Limma package; Model Matrix design
7.9 years ago by Steven Lakin ★ 1.8k
0
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1
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3.5k
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Comment: C: Help with linear regression model design
7.9 years ago by Steven Lakin ★ 1.8k
3
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3
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3.5k
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Answer: A: Help with linear regression model design
7.9 years ago by Steven Lakin ★ 1.8k
0
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1
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9.9k
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Comment: C: Multivariable linear regression using Limma package; Model Matrix design
7.9 years ago by Steven Lakin ★ 1.8k
1
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1
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9.9k
views
Answer: A: Multivariable linear regression using Limma package; Model Matrix design
7.9 years ago by Steven Lakin ★ 1.8k
0
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1
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2.7k
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Comment: C: Unranked nodes in NCBI's taxonomic tree
7.9 years ago by Steven Lakin ★ 1.8k
4
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2.7k
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Answer: A: Unranked nodes in NCBI's taxonomic tree
7.9 years ago by Steven Lakin ★ 1.8k
3
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1
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1.7k
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Answer: A: JunctionSeq: are co-variate terms used in the calculation of effect size using l
7.9 years ago by Steven Lakin ★ 1.8k
0
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0
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1.8k
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Answer: A: How to extract snp names?
7.9 years ago by Steven Lakin ★ 1.8k
1
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1
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4.1k
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Answer: A: graph theory with applications to biology/bioinformatics
7.9 years ago by Steven Lakin ★ 1.8k
1
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1
reply
2.1k
views
Comment: C: Variants called differ dramatically between runs
7.9 years ago by Steven Lakin ★ 1.8k
5
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1
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2.1k
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Answer: A: Variants called differ dramatically between runs
7.9 years ago by Steven Lakin ★ 1.8k
6
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0
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9.8k
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Answer: A: remove part of name of multiple files in linux
7.9 years ago by Steven Lakin ★ 1.8k
6
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0
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6.7k
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Answer: A: PCA of a genotype matrix
7.9 years ago by Steven Lakin ★ 1.8k
7
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0
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2.0k
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Answer: A: Is it OK to select a small subset of expression data for statistical testing?
7.9 years ago by Steven Lakin ★ 1.8k
2
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0
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4.9k
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Answer: A: Generate Random Dna Sequence Data With Equal Base Frequencies python
8.0 years ago by Steven Lakin ★ 1.8k
2
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0
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2.2k
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Answer: A: R: How to correctly compute p-value of a k-mer?
8.0 years ago by Steven Lakin ★ 1.8k
0
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0
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1.2k
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Answer: A: Fit probability law on genes length distribution
8.0 years ago by Steven Lakin ★ 1.8k
7
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1
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11k
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Answer: A: Is hierarchical clustering of significant genes 'supervised' or 'unsupervised' c
8.0 years ago by Steven Lakin ★ 1.8k
1
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0
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1.6k
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Answer: A: Making a data table more comprehensive
8.0 years ago by Steven Lakin ★ 1.8k
3
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1
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2.8k
views
Comment: C: Why Markov model is depended to size of dataset?
8.0 years ago by Steven Lakin ★ 1.8k
2
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0
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3.0k
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Answer: A: Best Way To Normalize Rna-Seq Data
8.2 years ago by Steven Lakin ★ 1.8k
2
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2
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3.1k
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Answer: A: Differential gene expression based on read counts using DESeq package
8.2 years ago by Steven Lakin ★ 1.8k
2
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1
reply
1.1k
views
Answer: A: [statistics question] What's the right process to find and use interactions betw
8.2 years ago by Steven Lakin ★ 1.8k
1
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0
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1.5k
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Answer: A: A walk from mutation to structural variation and assembly.
8.2 years ago by Steven Lakin ★ 1.8k
2
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1
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2.3k
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Answer: A: Classification-Based Machine Learning Methods for disease gene prediction
8.3 years ago by Steven Lakin ★ 1.8k
1
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0
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3.4k
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Comment: C: Need help with creating a Variant Caller for 10x data
8.3 years ago by Steven Lakin ★ 1.8k
2
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1
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3.4k
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Comment: C: Need help with creating a Variant Caller for 10x data
8.3 years ago by Steven Lakin ★ 1.8k
0
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0
replies
2.5k
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Answer: A: What is the best de novo assembler for bacteria?
8.4 years ago by Steven Lakin ★ 1.8k
2
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1
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5.1k
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Answer: A: VariantAnnotation installation error in R package
8.4 years ago by Steven Lakin ★ 1.8k
0
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0
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4.5k
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Comment: C: Parallelizing SAMTOOLS: how to make my command run faster?
8.4 years ago by Steven Lakin ★ 1.8k
1
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1
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4.5k
views
Answer: A: Parallelizing SAMTOOLS: how to make my command run faster?
8.4 years ago by Steven Lakin ★ 1.8k
0
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0
replies
4.4k
views
Answer: A: PCA for determining sequence similarities.
8.4 years ago by Steven Lakin ★ 1.8k
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