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0
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2
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2.9k
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Answer: A: Use bedtool to get number of shared features from intersetions
8.3 years ago by harold.smith.tarheel ★ 5.0k
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0
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4.0k
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Comment: C: unpaired R1 and R2 sequences
8.3 years ago by harold.smith.tarheel ★ 5.0k
6
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15k
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Comment: C: Remove reads counts overlapping with blacklist regions in BAM files
8.3 years ago by harold.smith.tarheel ★ 5.0k
1
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0
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1.4k
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Answer: A: How to automate the generation of a VCF file for
8.3 years ago by harold.smith.tarheel ★ 5.0k
0
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1
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4.0k
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Answer: A: unpaired R1 and R2 sequences
8.3 years ago by harold.smith.tarheel ★ 5.0k
0
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1
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2.3k
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Comment: C: Does bowtie2 die everytime the first base quality of a read is @?
8.3 years ago by harold.smith.tarheel ★ 5.0k
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0
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5.9k
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Comment: C: Reference assisted genome assembly - TOOLS
8.3 years ago by harold.smith.tarheel ★ 5.0k
2
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1
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2.0k
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Answer: A: Extract sequences flanking SNPs from organism without reference genome
8.3 years ago by harold.smith.tarheel ★ 5.0k
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0
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6.2k
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Comment: C: SPADES assembly failed, unequal amount of reads
8.3 years ago by harold.smith.tarheel ★ 5.0k
0
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1
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2.0k
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Comment: C: Extract sequences flanking SNPs from organism without reference genome
8.3 years ago by harold.smith.tarheel ★ 5.0k
2
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1
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6.2k
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Answer: A: SPADES assembly failed, unequal amount of reads
8.3 years ago by harold.smith.tarheel ★ 5.0k
0
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0
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2.2k
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Comment: C: Variant calling within and between 2 nematode strains
8.3 years ago by harold.smith.tarheel ★ 5.0k
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0
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2.4k
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Answer: A: worm base genes biomaRt filter
8.4 years ago by harold.smith.tarheel ★ 5.0k
1
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0
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18k
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Answer: A: Trying to get genome for bedtools
8.4 years ago by harold.smith.tarheel ★ 5.0k
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0
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1.6k
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Answer: A: Filtering Homeologous SNPs
8.4 years ago by harold.smith.tarheel ★ 5.0k
1
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0
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1.9k
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Comment: C: A new local alignment algorithm
8.4 years ago by harold.smith.tarheel ★ 5.0k
1
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0
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6.4k
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Comment: C: Which source of annotation files to use, Ensembl or UCSC?
8.4 years ago by harold.smith.tarheel ★ 5.0k
0
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0
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4.2k
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Comment: C: Converting to fastq and demultiplexing Illumina Hiseq4000 data using bcl2fastq
8.4 years ago by harold.smith.tarheel ★ 5.0k
1
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1
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4.2k
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Answer: A: Converting to fastq and demultiplexing Illumina Hiseq4000 data using bcl2fastq
8.4 years ago by harold.smith.tarheel ★ 5.0k
0
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0
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2.0k
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Comment: C: How does IGB provide strand specific output
8.4 years ago by harold.smith.tarheel ★ 5.0k
2
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0
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12k
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Answer: A: Chip-seq analysis with input and spike-in
8.4 years ago by harold.smith.tarheel ★ 5.0k
0
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0
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3.5k
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Comment: C: Download an old version of annovar
8.4 years ago by harold.smith.tarheel ★ 5.0k
4
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1
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3.4k
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Answer: A: Any tools available to generate fake raw reads from assembled genomes?
8.4 years ago by harold.smith.tarheel ★ 5.0k
0
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0
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2.2k
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Comment: C: Biggest barriers to making sense of sequence data
8.4 years ago by harold.smith.tarheel ★ 5.0k
1
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1
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2.2k
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Comment: C: Biggest barriers to making sense of sequence data
8.4 years ago by harold.smith.tarheel ★ 5.0k
3
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1
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2.2k
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Answer: A: Biggest barriers to making sense of sequence data
8.4 years ago by harold.smith.tarheel ★ 5.0k
0
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0
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4.2k
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Answer: A: WGS .fsa_nt file to .fastq.gz
8.5 years ago by harold.smith.tarheel ★ 5.0k
0
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2
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2.9k
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Comment: A: FREEBAYE vcf file and Snpsift error
8.5 years ago by harold.smith.tarheel ★ 5.0k
0
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0
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1.8k
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Comment: C: Generate head on vcf file from freebayes
8.5 years ago by harold.smith.tarheel ★ 5.0k
1
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2
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5.6k
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Comment: C: How to know the position of various transcripts of a given gene in the genomic s
8.5 years ago by harold.smith.tarheel ★ 5.0k
1
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3
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5.6k
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Answer: A: How to know the position of various transcripts of a given gene in the genomic s
8.5 years ago by harold.smith.tarheel ★ 5.0k
0
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1
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1.6k
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Comment: C: Different mapping rate problem
8.5 years ago by harold.smith.tarheel ★ 5.0k
0
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1
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7.4k
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Comment: C: Remove variants that are homozygous-reference (0/0) in two VCF files
8.5 years ago by harold.smith.tarheel ★ 5.0k
1
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1
reply
7.4k
views
Answer: A: Remove variants that are homozygous-reference (0/0) in two VCF files
8.5 years ago by harold.smith.tarheel ★ 5.0k
2
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1
reply
1.7k
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Comment: C: SNP calls all seem to have quality of zero
8.5 years ago by harold.smith.tarheel ★ 5.0k
0
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0
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3.0k
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Comment: C: Is it possible to add all possible VCF annotations in one command using ANNOVAR
8.5 years ago by harold.smith.tarheel ★ 5.0k
0
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0
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1.9k
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Answer: A: How to get sequence for a particular locus from .gff3 file?
8.5 years ago by harold.smith.tarheel ★ 5.0k
1
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0
replies
2.1k
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Comment: C: variant phred scale of plant genome
8.5 years ago by harold.smith.tarheel ★ 5.0k
1
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0
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1.4k
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Answer: A: NGS throughput historical data
8.5 years ago by harold.smith.tarheel ★ 5.0k
2
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0
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2.4k
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Comment: C: Simulation Tools To Generate Next-Generation Sequencing Reads along with their
8.5 years ago by harold.smith.tarheel ★ 5.0k
0
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0
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13k
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Comment: C: If the index sequences in my Illumina FASTQ headers aren't the barcodes, then wh
8.5 years ago by harold.smith.tarheel ★ 5.0k
0
votes
1
reply
13k
views
Comment: C: If the index sequences in my Illumina FASTQ headers aren't the barcodes, then wh
8.5 years ago by harold.smith.tarheel ★ 5.0k
4
votes
1
reply
13k
views
Answer: A: If the index sequences in my Illumina FASTQ headers aren't the barcodes, then wh
8.5 years ago by harold.smith.tarheel ★ 5.0k
7
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3
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38k
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Answer: C: Illumina Instrument Type from fastq?
8.5 years ago by harold.smith.tarheel ★ 5.0k
1
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0
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38k
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Comment: C: Illumina Instrument Type from fastq?
8.5 years ago by harold.smith.tarheel ★ 5.0k
1
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2
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38k
views
Comment: C: Illumina Instrument Type from fastq?
8.5 years ago by harold.smith.tarheel ★ 5.0k
2
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1
reply
38k
views
Answer: A: Illumina Instrument Type from fastq?
8.5 years ago by harold.smith.tarheel ★ 5.0k
0
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0
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16k
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Comment: C: Qual score in VCF file
8.5 years ago by harold.smith.tarheel ★ 5.0k
0
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1
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16k
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Answer: A: Qual score in VCF file
8.5 years ago by harold.smith.tarheel ★ 5.0k
1
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0
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2.1k
views
Comment: C: phred score from vcf quality
8.5 years ago by harold.smith.tarheel ★ 5.0k
527 results • Page 8 of 11
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