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3
votes
1
reply
762
views
What is the expected sequencing output for a Hi-C library?
sequencing hi-c illumina yield
updated 23 months ago by 86k • written 23 months ago by ★ 1.8k
0
votes
1
reply
1.5k
views
Comment: Comment: fasterq-dump not downloading both reads of a pair
2.3 years ago by Panos ★ 1.8k
3
votes
3
replies
1.5k
views
fasterq-dump not downloading both reads of a pair
fasterq-dump
updated 23 months ago by 44k • written 2.3 years ago by ★ 1.8k
1
vote
1
reply
19k
views
Comment: Comment: GFA to Fasta file
2.6 years ago by Panos ★ 1.8k
20
votes
10
replies
14k
views
How To Use The Kegg Xml Files?
kegg pathway
updated 2.2 years ago by 44k • written 14.6 years ago by ★ 1.8k
10
votes
4
replies
7.2k
views
How To Build A Custom Model File In Genemark?
gene prediction model
updated 6.4 years ago by 44k • written 14.7 years ago by ★ 1.8k
2
votes
1
reply
11k
views
Comment: C: Training Augustus for Maker
7.0 years ago by Panos ★ 1.8k
164
votes
71
replies
65k
views
36 follow
How To Efficiently Parse A Huge Fastq File?
fastq next-gen-sequencing
updated 7 months ago by ▴ 320 • written 13.6 years ago by ★ 1.8k
2
votes
1
reply
2.2k
views
Assembly Strategy
illumina
updated 11.0 years ago by 8.3k • written 11.0 years ago by ★ 1.8k
0
votes
0
replies
4.3k
views
Comment: C: Data Management System For Bioinformatics?
11.1 years ago by Panos ★ 1.8k
0
votes
0
replies
4.3k
views
Comment: C: Data Management System For Bioinformatics?
11.1 years ago by Panos ★ 1.8k
14
votes
6
replies
4.3k
views
Data Management System For Bioinformatics?
updated 11.1 years ago by 165k • written 11.1 years ago by ★ 1.8k
2
votes
0
replies
4.3k
views
Comment: C: Data Management System For Bioinformatics?
11.1 years ago by Panos ★ 1.8k
6
votes
4
replies
5.4k
views
What Is The Default Quality Encoding Expected By Bwa?
bwa illumina
updated 11.2 years ago by 28k • written 12.8 years ago by ★ 1.8k
0
votes
1
reply
4.2k
views
Comment: C: Possible Gene Unflattening Error In Bp_Genbank2Gff3.Pl Bioperl Script
11.3 years ago by Panos ★ 1.8k
1
vote
3
replies
4.2k
views
Possible Gene Unflattening Error In Bp_Genbank2Gff3.Pl Bioperl Script
gff3 genbank bioperl conversion ensembl
updated 11.3 years ago by 24k • written 11.3 years ago by ★ 1.8k
6
votes
10
replies
6.0k
views
How To Blast A Nucleotide Profile (Pssm) Against A Nucleotide Database?
blast pssm blastn
updated 11.4 years ago by ▴ 980 • written 11.4 years ago by ★ 1.8k
0
votes
1
reply
6.0k
views
Comment: C: How To Blast A Nucleotide Profile (Pssm) Against A Nucleotide Database?
11.4 years ago by Panos ★ 1.8k
0
votes
2
replies
6.0k
views
Comment: C: How To Blast A Nucleotide Profile (Pssm) Against A Nucleotide Database?
11.4 years ago by Panos ★ 1.8k
0
votes
1
reply
6.0k
views
Comment: C: How To Blast A Nucleotide Profile (Pssm) Against A Nucleotide Database?
11.4 years ago by Panos ★ 1.8k
41
votes
29
replies
16k
views
17 follow
Which Assembler To Use For Metagenomic Sequences?
metagenomics assembly
updated 11.5 years ago by ★ 1.1k • written 14.9 years ago by ★ 1.8k
42
votes
26
replies
55k
views
11 follow
How To Interpret A T-Test Output Produced By R
statistics
updated 11.6 years ago by 20 • written 12.6 years ago by ★ 1.8k
8
votes
6
replies
14k
views
How To Create A Phylogram In Phylip With Bootstrap Values On It?
updated 11.7 years ago by ▴ 10 • written 13.7 years ago by ★ 1.8k
6
votes
4
replies
9.3k
views
How To Get Bootstrap Values From A Tree Generated By The Consense Program (Phylip)?
updated 12.1 years ago by 1.9k • written 14.0 years ago by ★ 1.8k
0
votes
0
replies
55k
views
Comment: C: How To Interpret A T-Test Output Produced By R
12.5 years ago by Panos ★ 1.8k
0
votes
0
replies
55k
views
Comment: C: How To Interpret A T-Test Output Produced By R
12.5 years ago by Panos ★ 1.8k
0
votes
1
reply
3.1k
views
Comment: C: How To Get All Different Variants Of A Peptide?
12.6 years ago by Panos ★ 1.8k
0
votes
0
replies
3.1k
views
Comment: C: How To Get All Different Variants Of A Peptide?
12.6 years ago by Panos ★ 1.8k
0
votes
0
replies
3.1k
views
Comment: C: How To Get All Different Variants Of A Peptide?
12.6 years ago by Panos ★ 1.8k
3
votes
8
replies
3.1k
views
How To Get All Different Variants Of A Peptide?
perl
updated 12.6 years ago by ★ 2.9k • written 12.6 years ago by ★ 1.8k
3
votes
1
reply
4.5k
views
Trinity Output Filtering
trinity filtering
updated 12.8 years ago by 8.3k • written 12.8 years ago by ★ 1.8k
9
votes
1
reply
3.6k
views
What Does A "*" (Star) Mean In Mpileup'S "Read Bases" Column (The 5Th Column)?
mpileup
updated 12.8 years ago by ★ 1.2k • written 12.8 years ago by ★ 1.8k
0
votes
0
replies
3.5k
views
Comment: C: How To Calculate Number Of Bases Found In Introns/Cdss/Intergenic Space
12.9 years ago by Panos ★ 1.8k
0
votes
1
reply
3.5k
views
Comment: C: How To Calculate Number Of Bases Found In Introns/Cdss/Intergenic Space
12.9 years ago by Panos ★ 1.8k
4
votes
5
replies
3.5k
views
How To Calculate Number Of Bases Found In Introns/Cdss/Intergenic Space
intron cds
updated 12.9 years ago by 102k • written 12.9 years ago by ★ 1.8k
0
votes
0
replies
6.3k
views
Comment: C: Can A Cds Be Also An Intron?
12.9 years ago by Panos ★ 1.8k
0
votes
0
replies
6.3k
views
Comment: C: Can A Cds Be Also An Intron?
12.9 years ago by Panos ★ 1.8k
15
votes
6
replies
6.3k
views
Can A Cds Be Also An Intron?
gff intron exon cds
updated 12.9 years ago by ▴ 10 • written 12.9 years ago by ★ 1.8k
0
votes
0
replies
14k
views
Comment: C: How To Create A Phylogram In Phylip With Bootstrap Values On It?
13.0 years ago by Panos ★ 1.8k
1
vote
0
replies
10.0k
views
Comment: C: What Does Bwa'S '-N' Parameter Mean?
13.1 years ago by Panos ★ 1.8k
0
votes
0
replies
10.0k
views
Comment: C: What Does Bwa'S '-N' Parameter Mean?
13.1 years ago by Panos ★ 1.8k
28
votes
16
replies
10.0k
views
7 follow
What Does Bwa'S '-N' Parameter Mean?
bwa
updated 18 months ago by ▴ 20 • written 13.1 years ago by ★ 1.8k
2
votes
1
reply
10k
views
Answer: A: Perl Program For Reading Fastq Format Files
13.5 years ago by Panos ★ 1.8k
43
votes
2
replies
33k
views
What Does The "Proper Pair" Bitwise Flag Mean In A Sam File?
sam samtools
updated 13.5 years ago by ★ 1.3k • written 13.8 years ago by ★ 1.8k
6
votes
1
reply
5.5k
views
Should I Be Using K-Mer Coverage In Velvet Parameters Instead Of Nucleotide Coverage?
velvet coverage assembly
updated 13.5 years ago by 23k • written 13.5 years ago by ★ 1.8k
0
votes
0
replies
65k
views
Comment: C: How To Efficiently Parse A Huge Fastq File?
13.6 years ago by Panos ★ 1.8k
0
votes
0
replies
65k
views
Comment: C: How To Efficiently Parse A Huge Fastq File?
13.6 years ago by Panos ★ 1.8k
2
votes
0
replies
76k
views
Answer: A: Recommend Your Favorite Bioinformatics Books
13.6 years ago by Panos ★ 1.8k
0
votes
0
replies
10k
views
Comment: C: How To End Trim Sequences Using Prinseq?
13.6 years ago by Panos ★ 1.8k
0
votes
0
replies
10k
views
Comment: C: How To End Trim Sequences Using Prinseq?
13.6 years ago by Panos ★ 1.8k
92 results • Page 1 of 2
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