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766
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Comment: Comment: circlize R package to plot ecDNA
6 months ago by trausch ★ 1.9k
0
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0
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531
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Answer: Answer: Using Delly/Pindel/breakdancer for Identifying Transgene Insertion Sites in Mous
11 months ago by trausch ★ 1.9k
1
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1
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1.2k
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Answer: Answer: SHAPEIT5 phasing
13 months ago by trausch ★ 1.9k
1
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2
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1.4k
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Answer: Answer: somatic variant calling without matched normal in long-reads
13 months ago by trausch ★ 1.9k
0
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0
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762
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Answer: Answer: Protocol to combine WGS with Nanopore for Structural Variant confirmation?
13 months ago by trausch ★ 1.9k
1
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0
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602
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Answer: Answer: Can sangeranalyseR be changed to read SCF files?
16 months ago by trausch ★ 1.9k
1
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0
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2.0k
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Answer: Answer: Off-target % for whole-exome sequencing panel
22 months ago by trausch ★ 1.9k
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1
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1.0k
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Answer: Answer: delly filter input file
2.0 years ago by trausch ★ 1.9k
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0
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853
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Answer: Answer: Index genome not working in Tracy
2.4 years ago by trausch ★ 1.9k
2
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1
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1.3k
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Answer: Answer: clarifying head-to-head and tail-to-tail inversions
2.5 years ago by trausch ★ 1.9k
0
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1
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960
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Answer: Answer: Any good tools to generate newicks files for a large list of species?
2.8 years ago by trausch ★ 1.9k
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0
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2.1k
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Answer: Answer: Understanding ABI Sanger File Format
2.8 years ago by trausch ★ 1.9k
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0
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2.0k
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Answer: Answer: Het/Mixed Indel identification tools
2.9 years ago by trausch ★ 1.9k
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0
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2.6k
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Answer: Answer: How can I download the VCF file of the 1000 genomes project with the population
3.1 years ago by trausch ★ 1.9k
1
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0
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921
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Answer: Answer: Customisable DNA Read Simulation for Deleted Reads
3.1 years ago by trausch ★ 1.9k
4
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1
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909
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Answer: Answer: Sanger Sequence Analysis
3.1 years ago by trausch ★ 1.9k
2
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0
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1.6k
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Answer: Answer: Usability of depiction of individual reads in genome browser visualization
3.2 years ago by trausch ★ 1.9k
0
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0
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1.6k
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Answer: Answer: Detection of heterozygous exon deletion by Sanger and Long-Range PCR
3.3 years ago by trausch ★ 1.9k
1
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0
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2.5k
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Answer: Answer: Command-line alternative to Geneious assemble for Sanger sequencing data
3.3 years ago by trausch ★ 1.9k
1
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0
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1.7k
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Answer: Answer: Analysis of .ab1 file from sanger sequencer in galaxy
3.3 years ago by trausch ★ 1.9k
3
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3
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1.3k
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Answer: Answer: How many reads does Delly use for variant calling?
3.7 years ago by trausch ★ 1.9k
1
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0
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2.1k
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Answer: Answer: How to filter delly variants?
3.7 years ago by trausch ★ 1.9k
1
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1
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1.9k
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Answer: A: SARS Cov2 NGS data analysis pipeline
4.2 years ago by trausch ★ 1.9k
2
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1
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817
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Answer: A: Is there a data set for next-generation sequencing and third-generation sequenci
4.2 years ago by trausch ★ 1.9k
0
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0
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1.4k
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Comment: C: Structural variants detection from assembled genome from Nanopore sequence data
4.2 years ago by trausch ★ 1.9k
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2
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1.4k
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Answer: A: Structural variants detection from assembled genome from Nanopore sequence data
4.2 years ago by trausch ★ 1.9k
1
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0
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1.5k
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Answer: A: Sanger sequencing chromatogram aligned to reference gene
4.2 years ago by trausch ★ 1.9k
0
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0
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3.7k
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Answer: A: How to parse a .fasta file in python ?
4.3 years ago by trausch ★ 1.9k
1
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1
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4.2k
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Answer: A: What are the strands of structural variant breakpoints?
4.4 years ago by trausch ★ 1.9k
0
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0
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1.1k
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Answer: A: 1000 Genome Project Structural Variants for Illumina
4.5 years ago by trausch ★ 1.9k
3
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1
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7.7k
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Answer: A: Convert VCF dosage file into dosage only file
updated 4.6 years ago by 12k • written 7.7 years ago by ★ 1.9k
0
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1
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2.5k
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Comment: C: How to compare Sanger Sequenced data to the reference sequence?
4.9 years ago by trausch ★ 1.9k
1
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1
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2.5k
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Answer: A: How to compare Sanger Sequenced data to the reference sequence?
4.9 years ago by trausch ★ 1.9k
1
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0
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6.6k
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Answer: A: Software to analyse mutations in sanger sequencing files
4.9 years ago by trausch ★ 1.9k
0
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0
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29k
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Answer: A: Automated Primer-Blast like funcionnality
5.1 years ago by trausch ★ 1.9k
1
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0
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5.6k
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Answer: A: how to estimate heterozygosity by sample from a multi-sample vcf file
5.1 years ago by trausch ★ 1.9k
0
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1
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8.1k
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Comment: C: Explain the definition of DELLY output
5.3 years ago by trausch ★ 1.9k
2
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2
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8.1k
views
Answer: A: Explain the definition of DELLY output
5.3 years ago by trausch ★ 1.9k
2
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1
reply
16k
views
Answer: A: Where to get list of all Illumina adapters
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 1.9k
2
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0
replies
3.6k
views
Answer: A: Illumina WES intervals file for coverage analysis?
5.3 years ago by trausch ★ 1.9k
7
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1
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5.8k
views
Answer: A: List of CNV (copy number variation) regions in the human genome
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 1.9k
2
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1
reply
40k
views
Answer: A: hg38 annotation file (gtf) UCSC format
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 1.9k
1
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3
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4.2k
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Answer: A: Displaying somatic mutational signatures
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 1.9k
2
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0
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7.5k
views
Answer: A: Salvage barcode undetermined reads from Illumina HiSeq 2500 2 x 100 bp pair-ende
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 1.9k
0
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2
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3.7k
views
Comment: C: Extraction of SNPs from the 1000G vcf file for a set of regions
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 1.9k
2
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1
reply
3.1k
views
Answer: A: updating vcf file from rsIDs of dbsnp138 to dbsnp144
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 1.9k
0
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0
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8.6k
views
Comment: C: RefSeq Ids(NM*, NR*) to ensemble transcript Ids (ENST*)
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 1.9k
1
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1
reply
2.4k
views
Answer: A: How to add the gene names on wormbase_genes BED file?
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 1.9k
3
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1
reply
3.0k
views
Answer: C: Is it correct to merge TCGA mutation data from multiple centers
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 1.9k
2
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1
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3.0k
views
Comment: C: Calculation of heterozygosity at multi allelic region from 1000 Genomes data
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 1.9k
181 results • Page 1 of 4
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