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Answer: A: Proper way of calculating minor allele frequencies (via vcftools)
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 1.9k
1
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0
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11k
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Comment: C: Spades assembler output
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 1.9k
2
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0
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2.1k
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Answer: A: Genome sequencing and depth of coverage
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 1.9k
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0
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6.5k
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Answer: A: How to score a multiple sequence alignment (MSA)?
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
1
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0
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5.3k
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Answer: A: Exploratory data anaylsis to detect batch effects
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
1
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0
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4.1k
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Comment: C: Does anyone know any specific 1000 genomes WGS data that is around 30x coverage?
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
3
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0
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4.1k
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Answer: A: Does anyone know any specific 1000 genomes WGS data that is around 30x coverage?
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
2
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0
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2.7k
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Comment: C: Identifying full length transcripts in a transcriptome
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
1
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0
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2.6k
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Answer: A: Is there a concensus on which k-mers should be counted in a histogram graph of k
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
2
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0
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3.4k
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Answer: A: dbSNP: minor alleles for a list of SNPs
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
1
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0
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5.7k
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Answer: A: Need clarity on the concept of germline mutations
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
2
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0
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3.7k
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Answer: A: Questions about BreakDancer
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
5
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2
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7.2k
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Answer: A: list of gene or transcript IDs and their length
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
0
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0
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3.5k
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Answer: A: get deletion coverage from .bam file
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
0
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0
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2.2k
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Answer: A: Export of SNP data from 1000Genomes for several hundred genes
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
0
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0
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5.2k
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Answer: A: running trimmomatic 0.35
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
3
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0
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2.5k
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Answer: A: Methods of classifying, not detecting, structural variation?
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
1
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0
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2.5k
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Comment: C: Methods of classifying, not detecting, structural variation?
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.9k
1
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0
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2.8k
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Answer: A: Sanger sequencing data analysis
4.9 years ago by trausch ★ 1.9k
0
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1
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2.8k
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Comment: C: Sanger sequencing data analysis
4.9 years ago by trausch ★ 1.9k
0
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0
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1.2k
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Answer: A: Fusion orientation make sense or not
5.0 years ago by trausch ★ 1.9k
0
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0
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9.8k
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Comment: C: How To Call Snp From .Ab1 Files Of Sanger Sequencing?
5.0 years ago by trausch ★ 1.9k
0
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0
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4.1k
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Comment: C: Calling large indels from NGS
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 1.9k
1
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0
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2.6k
views
Answer: A: Any suggestion for sanger sequencing result editing
5.0 years ago by trausch ★ 1.9k
4
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0
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2.7k
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Answer: A: BWA Mem -M flag (mark split hits) effect on structural variation calling
5.0 years ago by trausch ★ 1.9k
0
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0
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3.6k
views
Comment: C: Where can I get the ab1 Peak Reporter tool
5.0 years ago by trausch ★ 1.9k
0
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0
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632
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Answer: A: Checking quality of predesigned probes for multiplex qPCR
5.1 years ago by trausch ★ 1.9k
0
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0
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2.5k
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Answer: A: VariantCalling with single sanger read
5.2 years ago by trausch ★ 1.9k
0
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0
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3.1k
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Answer: A: Indels by Sanger
5.2 years ago by trausch ★ 1.9k
1
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1
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2.5k
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Answer: A: Options for cell type deconvolution from whole blood?
5.3 years ago by trausch ★ 1.9k
3
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0
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1.5k
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Answer: A: number of cycles, Nextseq500, for whole exoems equencing, which option is more e
5.3 years ago by trausch ★ 1.9k
1
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0
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1.9k
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Answer: A: How to align paired-end Sanger sequences
5.4 years ago by trausch ★ 1.9k
2
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0
replies
2.3k
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Answer: A: Export Coverage on IGV
5.4 years ago by trausch ★ 1.9k
1
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0
replies
3.5k
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Answer: A: Calculating dinucleotide frequencies for each sequence in a multi fasta file
5.5 years ago by trausch ★ 1.9k
2
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0
replies
12k
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Comment: C: Mismatch and Indel statistics from BAM/SAM file
5.5 years ago by trausch ★ 1.9k
1
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1
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1.8k
views
Answer: A: Graphing GC Bias in Sequence Capture
5.5 years ago by trausch ★ 1.9k
0
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0
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9.5k
views
Comment: C: Oxford Nanopore error rate?
5.5 years ago by trausch ★ 1.9k
2
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0
replies
2.1k
views
Answer: A: Comparing metrics of two exome: how to interpret higher median coverage but lowe
5.5 years ago by trausch ★ 1.9k
2
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0
replies
39k
views
Answer: A: Generating consensus sequence from bam file
5.5 years ago by trausch ★ 1.9k
0
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0
replies
2.8k
views
Comment: C: DELLY CNV Calling
5.7 years ago by trausch ★ 1.9k
1
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1
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4.9k
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Answer: C: ATAC-seq : which read length?
5.7 years ago by trausch ★ 1.9k
0
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0
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1.7k
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Answer: A: Genotyping diploid organisms from Sanger AB1 files
5.7 years ago by trausch ★ 1.9k
0
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1
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1.7k
views
Comment: C: Validate PCR DNA primers against whole de novel genome
5.7 years ago by trausch ★ 1.9k
1
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1
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1.7k
views
Answer: A: Validate PCR DNA primers against whole de novel genome
5.7 years ago by trausch ★ 1.9k
1
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0
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3.8k
views
Answer: C: Exome Seq tutorial
5.8 years ago by trausch ★ 1.9k
1
vote
0
replies
3.1k
views
Answer: A: Merging peak files for unionized set
5.8 years ago by trausch ★ 1.9k
2
votes
1
reply
3.8k
views
Comment: C: Get genotype GT from multi-sample VCF (per chromosome)
6.0 years ago by trausch ★ 1.9k
1
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1
reply
3.8k
views
Answer: A: Get genotype GT from multi-sample VCF (per chromosome)
6.0 years ago by trausch ★ 1.9k
0
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0
replies
3.3k
views
Comment: C: find coverage of specific exomes from a bam file
6.0 years ago by trausch ★ 1.9k
2
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1
reply
3.3k
views
Answer: A: find coverage of specific exomes from a bam file
6.0 years ago by trausch ★ 1.9k
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