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Comment: C: Best aligner to identify single point mutation
4.0 years ago by silas008 ▴ 170
6
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7
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943
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Best aligner to identify single point mutation
RNA-Seq
4.0 years ago by silas008 ▴ 170
10
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9
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4.0k
views
glmQLFTest coef for multiple comparisons
edgeR RNA-Seq
updated 4.0 years ago by ★ 7.6k • written 4.1 years ago by ▴ 170
0
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0
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4.0k
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Comment: C: glmQLFTest coef for multiple comparisons
4.1 years ago by silas008 ▴ 170
0
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1
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4.0k
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Comment: C: glmQLFTest coef for multiple comparisons
4.1 years ago by silas008 ▴ 170
0
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1
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4.0k
views
Comment: C: glmQLFTest coef for multiple comparisons
4.1 years ago by silas008 ▴ 170
0
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1
reply
4.0k
views
Comment: C: glmQLFTest coef for multiple comparisons
4.1 years ago by silas008 ▴ 170
0
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0
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5.3k
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Comment: C: EdgeR analysis with CPM normalzed counts
4.2 years ago by silas008 ▴ 170
6
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7
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5.3k
views
EdgeR analysis with CPM normalzed counts
RNA-Seq
updated 4.2 years ago by 85k • written 4.2 years ago by ▴ 170
0
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0
replies
5.3k
views
Comment: C: EdgeR analysis with CPM normalzed counts
4.2 years ago by silas008 ▴ 170
0
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2
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5.3k
views
Comment: C: EdgeR analysis with CPM normalzed counts
4.2 years ago by silas008 ▴ 170
2
votes
1
reply
1.2k
views
EdgeR matrix design and comparisons for paired samples
RNA-Seq edgeR
updated 4.3 years ago by 35k • written 4.3 years ago by ▴ 170
1
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2
replies
4.6k
views
STAR error: EXITING because of FATAL ERROR in reads input: short read sequence line: 0
RNA-Seq
updated 4.3 years ago by • 0 • written 4.7 years ago by ▴ 170
0
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0
replies
43k
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Comment: C: LogFC and LogCPM
4.8 years ago by silas008 ▴ 170
0
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0
replies
952
views
Comment: C: How to caracterize single point mutation (or editing) in RNAseq?
4.8 years ago by silas008 ▴ 170
1
vote
2
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952
views
How to caracterize single point mutation (or editing) in RNAseq?
RNAseq GATK
4.8 years ago by silas008 ▴ 170
0
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0
replies
2.9k
views
Comment: C: GEO (NCBI) confusing data
updated 4.9 years ago by 44k • written 8.8 years ago by ▴ 170
0
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0
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2.2k
views
Comment: C: How to add the gene names on wormbase_genes BED file?
updated 4.9 years ago by 44k • written 8.8 years ago by ▴ 170
0
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0
replies
3.5k
views
Comment: C: Problem with Fastqc quality control for miRNAseq data
updated 5.0 years ago by 44k • written 9.4 years ago by ▴ 170
3
votes
3
replies
1.4k
views
Is there some good software to align/compare fasta sequences in my PC
fasta comparison
updated 5.4 years ago by ▴ 460 • written 5.4 years ago by ▴ 170
1
vote
1
reply
11k
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Comment: C: How to perform multiple comparisons using edgeR?
5.5 years ago by silas008 ▴ 170
1
vote
1
reply
11k
views
Comment: C: How to perform multiple comparisons using edgeR?
5.5 years ago by silas008 ▴ 170
0
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0
replies
11k
views
Comment: C: How to perform multiple comparisons using edgeR?
5.5 years ago by silas008 ▴ 170
0
votes
1
reply
11k
views
Comment: C: How to perform multiple comparisons using edgeR?
5.5 years ago by silas008 ▴ 170
0
votes
1
reply
11k
views
Comment: C: How to perform multiple comparisons using edgeR?
5.5 years ago by silas008 ▴ 170
0
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0
replies
11k
views
Comment: A: How to perform multiple comparisons using edgeR?
5.5 years ago by silas008 ▴ 170
8
votes
15
replies
11k
views
How to perform multiple comparisons using edgeR?
RNA-Seq edgeR
updated 21 months ago by • 0 • written 5.5 years ago by ▴ 170
0
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1
reply
11k
views
Comment: C: How to perform multiple comparisons using edgeR?
5.5 years ago by silas008 ▴ 170
1
vote
1
reply
16k
views
Comment: C: How to use edgeR to compare multiple conditions to reference condtiion
5.5 years ago by silas008 ▴ 170
1
vote
0
replies
1.0k
views
What type of GTF file should I use for miRNAseq analysis?
RNA-Seq miRNA edgeR
5.5 years ago by silas008 ▴ 170
0
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0
replies
3.2k
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Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
5.5 years ago by silas008 ▴ 170
0
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0
replies
3.2k
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Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
5.5 years ago by silas008 ▴ 170
1
vote
2
replies
2.2k
views
How to add the gene names on wormbase_genes BED file?
genes wormbase
updated 2.3 years ago by 44k • written 8.8 years ago by ▴ 170
2
votes
1
reply
2.3k
views
edgeR analysis outputs FDR equals 1
RNA-Seq edgeR FDR
updated 5.5 years ago by 14k • written 5.5 years ago by ▴ 170
5
votes
10
replies
3.2k
views
Should I keep all HTSeq table informations for edgeR analysis?
htseq edgeR RNAseq
updated 5.5 years ago by ★ 2.2k • written 5.5 years ago by ▴ 170
0
votes
2
replies
3.2k
views
Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
5.5 years ago by silas008 ▴ 170
4
votes
8
replies
2.5k
views
Bowtie2 mapped just 50% of the reads
RNA-Seq
updated 5.8 years ago by 20 • written 5.8 years ago by ▴ 170
0
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0
replies
2.5k
views
Comment: C: Bowtie2 mapped just 50% of the reads
5.8 years ago by silas008 ▴ 170
0
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0
replies
2.5k
views
Comment: C: Bowtie2 mapped just 50% of the reads
5.8 years ago by silas008 ▴ 170
0
votes
1
reply
2.5k
views
Comment: C: Bowtie2 mapped just 50% of the reads
5.8 years ago by silas008 ▴ 170
2
votes
8
replies
2.4k
views
Problem with bad quality bases in RNAseq
RNA-seq
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 170
0
votes
2
replies
6.1k
views
GFF3 to GTF
gff gtf
updated 6.2 years ago by 44k • written 8.7 years ago by ▴ 170
17
votes
8
replies
43k
views
7 follow
LogFC and LogCPM
rna-seq
updated 3.4 years ago by ▴ 260 • written 7.5 years ago by ▴ 170
0
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0
replies
4.8k
views
Comment: C: How to extract reads from bam file?
6.3 years ago by silas008 ▴ 170
0
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0
replies
4.8k
views
Comment: C: How to extract reads from bam file?
6.3 years ago by silas008 ▴ 170
0
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0
replies
4.8k
views
Comment: C: How to extract reads from bam file?
6.3 years ago by silas008 ▴ 170
0
votes
1
reply
4.8k
views
Comment: C: How to extract reads from bam file?
6.3 years ago by silas008 ▴ 170
3
votes
8
replies
4.8k
views
How to extract reads from bam file?
RNA-Seq alignment
updated 6.3 years ago by 44k • written 6.3 years ago by ▴ 170
0
votes
0
replies
57k
views
Comment: C: PCA plot from read count matrix from RNA-Seq
6.3 years ago by silas008 ▴ 170
0
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1
reply
2.5k
views
Comment: C: Can I use absolut numbers (not log values) to make a Heatmap?
6.3 years ago by silas008 ▴ 170
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