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1.4k
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Comment: Comment: Extracting unmapped reads from a sam file and converting to fastq
11 months ago by biobiu ▴ 150
0
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1
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704
views
Comment: Comment: Chimeric reads analysis
11 months ago by biobiu ▴ 150
1
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3
replies
704
views
Chimeric reads analysis
NGS
updated 11 months ago by 21k • written 11 months ago by ▴ 150
0
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1
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978
views
Comment: Comment: Construction of a phylogentic tree for thousands of bacterial genomes
12 months ago by biobiu ▴ 150
2
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4
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978
views
Construction of a phylogentic tree for thousands of bacterial genomes
Phylogenomics
updated 12 months ago by ★ 29k • written 12 months ago by ▴ 150
0
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1
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1.9k
views
Comment: Comment: Scan multiple sequences on multiple hmm profiles
2.2 years ago by biobiu ▴ 150
0
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1
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1.9k
views
Comment: Comment: Scan multiple sequences on multiple hmm profiles
2.2 years ago by biobiu ▴ 150
3
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4
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1.9k
views
Scan multiple sequences on multiple hmm profiles
Hmm hmmer
updated 2.2 years ago by ★ 29k • written 2.2 years ago by ▴ 150
0
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0
replies
1.5k
views
Comment: Comment: Mutate genomes in silico
2.7 years ago by biobiu ▴ 150
6
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5
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1.5k
views
Mutate genomes in silico
genome
2.7 years ago by biobiu ▴ 150
3
votes
2
replies
816
views
Upload database of a tool
software-development
updated 2.0 years ago by 45k • written 2.9 years ago by ▴ 150
0
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0
replies
2.1k
views
Comment: Comment: blast with multithreads is much slower
3.1 years ago by biobiu ▴ 150
0
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1
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2.1k
views
Comment: Comment: blast with multithreads is much slower
3.1 years ago by biobiu ▴ 150
0
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5
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2.1k
views
blast with multithreads is much slower
blast
3.1 years ago by biobiu ▴ 150
0
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0
replies
493
views
Do RefSeq viruses include prophages?
Prophages refseq
3.2 years ago by biobiu ▴ 150
0
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0
replies
492
views
Abundance calculation - taking into account genome size
relative-abundance metagenomics genome-size
3.3 years ago by biobiu ▴ 150
0
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0
replies
535
views
Get all best hits- bowtie2
bowtie2 Alignment
3.5 years ago by biobiu ▴ 150
1
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0
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1.1k
views
Answer: Answer: Stool miRNA - low alignment rate
3.7 years ago by biobiu ▴ 150
0
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1
reply
3.6k
views
Comment: Comment: Recommended mapper
3.7 years ago by biobiu ▴ 150
0
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0
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3.6k
views
Comment: Comment: Recommended mapper
3.7 years ago by biobiu ▴ 150
1
vote
11
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3.6k
views
Recommended mapper
alignment metagenomics Mapping
updated 3.7 years ago by 102k • written 3.7 years ago by ▴ 150
0
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0
replies
2.1k
views
Comment: Comment: Basic annotation of refseq bacterial genomes
4.0 years ago by biobiu ▴ 150
0
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0
replies
2.1k
views
Comment: Comment: Basic annotation of refseq bacterial genomes
4.0 years ago by biobiu ▴ 150
1
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7
replies
2.1k
views
Basic annotation of refseq bacterial genomes
annotation bacteria
4.0 years ago by biobiu ▴ 150
0
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2
replies
2.1k
views
Comment: Comment: Basic annotation of refseq bacterial genomes
4.0 years ago by biobiu ▴ 150
0
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0
replies
1.3k
views
Answer: Answer: CNVkit result interpretation
4.0 years ago by biobiu ▴ 150
0
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0
replies
1.2k
views
Comment: Comment: basic pathways analysis - bacteria genome
4.1 years ago by biobiu ▴ 150
0
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2
replies
1.2k
views
basic pathways analysis - bacteria genome
microbial pathway
4.1 years ago by biobiu ▴ 150
0
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0
replies
1.3k
views
Comment: Comment: Taxonomy assignment of viral RNA
4.2 years ago by biobiu ▴ 150
1
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2
replies
1.3k
views
Taxonomy assignment of viral RNA
assembly taxa metagenomics
4.2 years ago by biobiu ▴ 150
0
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0
replies
761
views
Predicting peptide binding site of a protein
peptide
4.4 years ago by biobiu ▴ 150
0
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6
replies
5.5k
views
diamond blastp produce longer alignments with lower identity than ncbi blast
alignment blastp diamond
4.8 years ago by biobiu ▴ 150
0
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0
replies
5.5k
views
Answer: A: diamond blastp produce longer alignments with lower identity than ncbi blast
4.8 years ago by biobiu ▴ 150
0
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0
replies
5.5k
views
Comment: C: diamond blastp produce longer alignments with lower identity than ncbi blast
4.9 years ago by biobiu ▴ 150
0
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0
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5.5k
views
Comment: C: diamond blastp produce longer alignments with lower identity than ncbi blast
4.9 years ago by biobiu ▴ 150
2
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6
replies
6.0k
views
calculating abundance of metagenomes
Assembly alignment
updated 5.0 years ago by 7.6k • written 5.9 years ago by ▴ 150
0
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3
replies
2.1k
views
Panel of tumors for CNV detection
CNV CNA panel of normals
updated 19 months ago by • 0 • written 6.3 years ago by ▴ 150
0
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0
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2.5k
views
Comment: A: Does mirna-seq is stranded?
updated 5.5 years ago by 45k • written 9.4 years ago by ▴ 150
0
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1
reply
110k
views
Comment: A: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 5.5 years ago by 45k • written 8.9 years ago by ▴ 150
0
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1
reply
984
views
Categorizing prokka outputs
gene
5.6 years ago by biobiu ▴ 150
0
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1
reply
1.7k
views
Comment: C: Download EC number tree
5.6 years ago by biobiu ▴ 150
2
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5
replies
1.7k
views
Download EC number tree
gene
updated 5.6 years ago by 152k • written 5.6 years ago by ▴ 150
0
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0
replies
1.7k
views
Comment: C: Download EC number tree
5.6 years ago by biobiu ▴ 150
3
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8
replies
4.8k
views
metagenomics- read based diversity analysis
metagenomics
updated 5.6 years ago by 3.3k • written 5.8 years ago by ▴ 150
0
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4
replies
12k
views
Diversity analysis after metaphlan2
metagenomics
updated 5.7 years ago by ▴ 50 • written 5.9 years ago by ▴ 150
0
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0
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6.9k
views
Comment: C: Shotgun rarefactions - metagenomics (microbiome), MetaPhlAn2
5.8 years ago by biobiu ▴ 150
1
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0
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6.9k
views
Comment: A: Shotgun rarefactions - metagenomics (microbiome), MetaPhlAn2
5.8 years ago by biobiu ▴ 150
0
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0
replies
857
views
Proportion of traits in several groups
propotion-test fishers-exact-test
updated 2.0 years ago by 45k • written 5.8 years ago by ▴ 150
1
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1
reply
14k
views
Answer: A: Genome assembly statistical tools
5.9 years ago by biobiu ▴ 150
0
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0
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2.3k
views
Answer: A: Low value of mapped reads against a metagenomic co-assembly
5.9 years ago by biobiu ▴ 150
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