Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
8
votes
0
replies
2.9k
views
Answer: A: Replacing Dots In File
4.5 years ago by toni ★ 2.2k
1
vote
0
replies
66k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.5 years ago by 44k • written 12.6 years ago by ★ 2.2k
9
votes
0
replies
66k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.5 years ago by 44k • written 13.5 years ago by ★ 2.2k
6
votes
1
reply
95k
views
Answer: A: How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Seque
updated 4.7 years ago by 44k • written 13.1 years ago by ★ 2.2k
6
votes
2
replies
23k
views
Answer: A: R: Heatmaps Log2 Scale Or Non Log Scale?
updated 5.2 years ago by 44k • written 13.9 years ago by ★ 2.2k
13
votes
6
replies
5.4k
views
Selecting Nodes Of High Correlation In A Tree
microarray gene clustering
updated 6.2 years ago by 44k • written 14.6 years ago by ★ 2.2k
2
votes
2
replies
8.8k
views
Answer: Answer: Calculate percentage of bases covered less than nX in targeted sequencing experi
updated 2.6 years ago by 44k • written 6.3 years ago by ★ 2.2k
0
votes
0
replies
19k
views
Comment: C: Final Solution For "Mapq Should Be 0 For Unmapped Read."
8.6 years ago by toni ★ 2.2k
0
votes
1
reply
6.5k
views
Comment: Comment: how to calculate the correlation and p values for all combination of a gene expr
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 2.2k
9
votes
1
reply
2.6k
views
Answer: Answer: Does build 37 of the human reference genome contain 2.85Gbp?
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 2.2k
2
votes
1
reply
103k
views
Comment: Comment: Multiline Fasta To Single Line Fasta
updated 2.7 years ago by 44k • written 10.0 years ago by ★ 2.2k
1
vote
0
replies
3.6k
views
Answer: Answer: Does read-depth refer to a fold?
updated 2.8 years ago by 44k • written 10.1 years ago by ★ 2.2k
66
votes
43
replies
28k
views
23 follow
Ngs - Huge (Fastq) File Parsing - Which Language For Good Efficiency ?
next-gen sequencing parsing fastq programming
updated 2.8 years ago by 44k • written 13.8 years ago by ★ 2.2k
9
votes
1
reply
15k
views
Library Duplicates Vs. Optical Duplicates (Picard Markduplicates)
picard markduplicates bam
updated 10.9 years ago by 20 • written 13.2 years ago by ★ 2.2k
0
votes
0
replies
5.3k
views
Comment: C: Markduplicates Creating A Loss Of Mate Pair
11.1 years ago by toni ★ 2.2k
1
vote
2
replies
4.1k
views
Answer: A: Split Fastq Paired-Read Using Awk
11.6 years ago by toni ★ 2.2k
2
votes
0
replies
10.0k
views
Comment: C: How To Extract Consensus Sequence Of Mapped Regions From A Bam File?
11.6 years ago by toni ★ 2.2k
0
votes
0
replies
14k
views
Comment: C: Fastq Quality Control And Reporting - Aka Fastqc Versus The New Contenders
11.7 years ago by toni ★ 2.2k
0
votes
1
reply
6.6k
views
Comment: C: Total Duplicate Percentage Reported In Fastqc
11.7 years ago by toni ★ 2.2k
0
votes
1
reply
6.6k
views
Comment: C: Total Duplicate Percentage Reported In Fastqc
11.7 years ago by toni ★ 2.2k
2
votes
0
replies
3.8k
views
Comment: C: What If Your Polya+, 50Bp, Illumina_Hi-Seq_Paired-End_Rna-Seq Data Has ~86% Dupl
11.8 years ago by toni ★ 2.2k
19
votes
6
replies
4.3k
views
Best Practices For Pipeline Versioning
pipeline
updated 11.8 years ago by 5.0k • written 11.8 years ago by ★ 2.2k
4
votes
2
replies
14k
views
Answer: A: How Can I Split Paired End Fastq Files
11.8 years ago by toni ★ 2.2k
1
vote
1
reply
14k
views
Comment: C: How Can I Split Paired End Fastq Files
11.8 years ago by toni ★ 2.2k
1
vote
1
reply
14k
views
Comment: C: How Can I Split Paired End Fastq Files
11.8 years ago by toni ★ 2.2k
1
vote
0
replies
14k
views
Comment: C: How Can I Split Paired End Fastq Files
11.8 years ago by toni ★ 2.2k
0
votes
0
replies
4.3k
views
Comment: C: Best Practices For Pipeline Versioning
11.8 years ago by toni ★ 2.2k
0
votes
1
reply
4.4k
views
Comment: C: I Have A Problem Using The Gem Mapper To Calculate Mappability. It Dies After A
11.8 years ago by toni ★ 2.2k
0
votes
1
reply
4.4k
views
Comment: C: I Have A Problem Using The Gem Mapper To Calculate Mappability. It Dies After A
11.8 years ago by toni ★ 2.2k
6
votes
1
reply
52k
views
Answer: Answer: Tool To Find Out If Fastq Is In Sanger Or Phred64 Encoding?
updated 23 months ago by 44k • written 11.8 years ago by ★ 2.2k
3
votes
1
reply
11k
views
Answer: A: Disable Soft-Clipping Bwa Aln
11.8 years ago by toni ★ 2.2k
3
votes
0
replies
8.6k
views
Answer: A: How To Parse Fastq File?
11.8 years ago by toni ★ 2.2k
1
vote
1
reply
8.6k
views
Comment: C: How To Parse Fastq File?
11.8 years ago by toni ★ 2.2k
0
votes
1
reply
20k
views
Comment: C: Best Copy Number Variation Tools
12.0 years ago by toni ★ 2.2k
0
votes
0
replies
5.1k
views
Comment: C: Bwa Soft-Clipping Pattern In Read Length Distribution Using "-Q 20" Parameter
12.1 years ago by toni ★ 2.2k
1
vote
0
replies
19k
views
Answer: A: Final Solution For "Mapq Should Be 0 For Unmapped Read."
12.1 years ago by toni ★ 2.2k
0
votes
0
replies
5.1k
views
Comment: C: Bwa Soft-Clipping Pattern In Read Length Distribution Using "-Q 20" Parameter
12.1 years ago by toni ★ 2.2k
0
votes
0
replies
5.1k
views
Comment: C: Bwa Soft-Clipping Pattern In Read Length Distribution Using "-Q 20" Parameter
12.1 years ago by toni ★ 2.2k
0
votes
0
replies
5.1k
views
Comment: C: Bwa Soft-Clipping Pattern In Read Length Distribution Using "-Q 20" Parameter
12.1 years ago by toni ★ 2.2k
4
votes
8
replies
5.1k
views
Bwa Soft-Clipping Pattern In Read Length Distribution Using "-Q 20" Parameter
bwa alignment quality
updated 12.1 years ago by 3.0k • written 12.1 years ago by ★ 2.2k
1
vote
0
replies
63k
views
Comment: C: How To Efficiently Parse A Huge Fastq File?
updated 12.2 years ago by 101k • written 13.4 years ago by ★ 2.2k
0
votes
0
replies
4.1k
views
Comment: C: Fine Tune Ngs Downstream Analyses Using Genome Mappability ?
12.7 years ago by toni ★ 2.2k
0
votes
0
replies
4.1k
views
Comment: C: Fine Tune Ngs Downstream Analyses Using Genome Mappability ?
12.7 years ago by toni ★ 2.2k
1
vote
0
replies
2.7k
views
Answer: A: How To Merge Fasta Header With Description Using Perl :
12.7 years ago by toni ★ 2.2k
9
votes
7
replies
4.1k
views
Fine Tune Ngs Downstream Analyses Using Genome Mappability ?
genome next-gen sequencing mapping analysis
updated 12.7 years ago by ★ 1.5k • written 12.7 years ago by ★ 2.2k
1
vote
2
replies
3.7k
views
Answer: A: How Reads Have Been Mapped In My Bam File?
12.7 years ago by toni ★ 2.2k
0
votes
0
replies
4.1k
views
Comment: C: Fine Tune Ngs Downstream Analyses Using Genome Mappability ?
12.7 years ago by toni ★ 2.2k
0
votes
0
replies
21k
views
Comment: C: Bwa Aln Output In .Bam
12.7 years ago by toni ★ 2.2k
0
votes
0
replies
21k
views
Comment: C: Bwa Aln Output In .Bam
12.7 years ago by toni ★ 2.2k
0
votes
0
replies
21k
views
Comment: C: Bwa Aln Output In .Bam
12.7 years ago by toni ★ 2.2k
120 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6