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3
votes
12
replies
11k
views
7 follow
Remove ensembl identifiers from Seurat
seurat rstudio RNA-Seq
updated 17 months ago by • 0 • written 5.0 years ago by ▴ 420
0
votes
1
reply
2.3k
views
Comment: Comment: Loops for Seurat functions
2.6 years ago by V ▴ 420
2
votes
3
replies
2.3k
views
Loops for Seurat functions
seurat R
updated 2.6 years ago by 5.0k • written 2.6 years ago by ▴ 420
0
votes
1
reply
7.3k
views
Comment: Comment: Remove ribosomal genes in single-cell RNAseq analysis?
2.7 years ago by V ▴ 420
0
votes
0
replies
1.7k
views
Comment: Comment: Detecting outlier in single cell multiome data.
2.7 years ago by V ▴ 420
0
votes
1
reply
1.7k
views
Comment: Comment: Detecting outlier in single cell multiome data.
2.7 years ago by V ▴ 420
0
votes
1
reply
1.7k
views
Comment: Comment: Detecting outlier in single cell multiome data.
2.7 years ago by V ▴ 420
1
vote
1
reply
1.7k
views
Answer: Answer: Detecting outlier in single cell multiome data.
2.7 years ago by V ▴ 420
1
vote
1
reply
7.3k
views
Answer: Answer: Remove ribosomal genes in single-cell RNAseq analysis?
2.7 years ago by V ▴ 420
8
votes
5
replies
12k
views
scVelo on Seurat umap
Seurat scVelo RNA
updated 2.8 years ago by ▴ 10 • written 5.1 years ago by ▴ 420
0
votes
0
replies
843
views
Comment: Comment: Identify predicted TF targets by binding motif
3.4 years ago by V ▴ 420
0
votes
2
replies
843
views
Identify predicted TF targets by binding motif
atac-seq multiome chromatin Seurat
3.4 years ago by V ▴ 420
6
votes
1
reply
4.3k
views
Change location of 'fragments' in multiome Seurat file
RNA-Seq R Seurat Signac ATAC-Seq
3.8 years ago by V ▴ 420
6
votes
0
replies
4.3k
views
Answer: Answer: Change location of 'fragments' in multiome Seurat file
3.8 years ago by V ▴ 420
1
vote
1
reply
3.7k
views
Comment: Comment: Can not detect spliced / unspliced counts
4.0 years ago by V ▴ 420
1
vote
1
reply
3.7k
views
Comment: Comment: Can not detect spliced / unspliced counts
4.0 years ago by V ▴ 420
0
votes
0
replies
1.3k
views
Issue renaming clusters in Python
seurat python
4.1 years ago by V ▴ 420
0
votes
1
reply
1.4k
views
Comment: C: Annotating peaks with genes
4.4 years ago by V ▴ 420
1
vote
3
replies
1.4k
views
Annotating peaks with genes
atac-seq atac multiome singlecell
updated 4.4 years ago by ★ 19k • written 4.4 years ago by ▴ 420
0
votes
0
replies
3.2k
views
Comment: C: Help with Rstudio in Anaconda Navigator
4.7 years ago by V ▴ 420
0
votes
3
replies
3.2k
views
Help with Rstudio in Anaconda Navigator
anaconda RStudio Ubuntu
4.7 years ago by V ▴ 420
0
votes
0
replies
3.2k
views
Answer: A: Help with Rstudio in Anaconda Navigator
4.7 years ago by V ▴ 420
0
votes
0
replies
731
views
TF regulatory network reconstruction from single cell
scRNAseq Seurat
updated 4.9 years ago by 12k • written 4.9 years ago by ▴ 420
4
votes
2
replies
10k
views
Running scVelo on Seurat
RNA-Seq velocity singlecell Seurat
updated 5.0 years ago by ▴ 30 • written 5.1 years ago by ▴ 420
0
votes
0
replies
22k
views
Comment: C: Re-arrange conditions in Seurat
5.0 years ago by V ▴ 420
0
votes
0
replies
22k
views
Comment: C: Re-arrange conditions in Seurat
5.0 years ago by V ▴ 420
0
votes
1
reply
22k
views
Comment: C: Re-arrange conditions in Seurat
5.0 years ago by V ▴ 420
4
votes
9
replies
22k
views
Re-arrange conditions in Seurat
seurat rnaseq
updated 5.0 years ago by 3.3k • written 5.0 years ago by ▴ 420
0
votes
1
reply
22k
views
Comment: C: Re-arrange conditions in Seurat
5.0 years ago by V ▴ 420
0
votes
0
replies
11k
views
Comment: C: Remove ensembl identifiers from Seurat
5.0 years ago by V ▴ 420
0
votes
2
replies
11k
views
Comment: C: Remove ensembl identifiers from Seurat
5.0 years ago by V ▴ 420
0
votes
0
replies
11k
views
Comment: C: Remove ensembl identifiers from Seurat
5.0 years ago by V ▴ 420
0
votes
0
replies
3.1k
views
Comment: C: pre-mRNA GTF reference for 10x
5.1 years ago by V ▴ 420
1
vote
5
replies
3.1k
views
pre-mRNA GTF reference for 10x
singlecellRNAseq gtf singlecell velocity RNA
updated 5.1 years ago by ▴ 710 • written 5.1 years ago by ▴ 420
2
votes
0
replies
2.8k
views
Answer: C: KEGG pathway gene lists differ between sources
5.1 years ago by V ▴ 420
0
votes
0
replies
3.1k
views
Comment: C: pre-mRNA GTF reference for 10x
5.1 years ago by V ▴ 420
0
votes
1
reply
3.7k
views
Comment: C: Can not detect spliced / unspliced counts
5.1 years ago by V ▴ 420
2
votes
7
replies
3.7k
views
Can not detect spliced / unspliced counts
rnaseq RNA velocity scVelo
updated 4.0 years ago by • 0 • written 5.1 years ago by ▴ 420
0
votes
0
replies
10k
views
Comment: C: Running scVelo on Seurat
5.1 years ago by V ▴ 420
0
votes
0
replies
2.5k
views
Comment: C: Seurat FeaturePlot across stims
5.1 years ago by V ▴ 420
0
votes
0
replies
12k
views
Comment: C: scVelo on Seurat umap
5.1 years ago by V ▴ 420
1
vote
2
replies
2.5k
views
Seurat FeaturePlot across stims
seurat Seurat rstudio
5.1 years ago by V ▴ 420
0
votes
0
replies
1.3k
views
Comment: C: Subsetting Genes from Clusters
5.1 years ago by V ▴ 420
2
votes
3
replies
1.3k
views
Subsetting Genes from Clusters
rstudio seurat r dataframes
5.1 years ago by V ▴ 420
0
votes
0
replies
49k
views
Comment: C: Extracting cells only from one condition (Seurat)
5.2 years ago by V ▴ 420
0
votes
1
reply
49k
views
Comment: C: Extracting cells only from one condition (Seurat)
5.2 years ago by V ▴ 420
0
votes
1
reply
4.1k
views
Comment: C: Cluster using known marker genes (Seurat)
5.3 years ago by V ▴ 420
1
vote
3
replies
4.1k
views
Cluster using known marker genes (Seurat)
seurat single cell rnaseq rstudio rnaset
updated 5.3 years ago by 3.3k • written 5.3 years ago by ▴ 420
22
votes
7
replies
49k
views
Extracting cells only from one condition (Seurat)
single cell rnaseq seurat RNA-Seq R
updated 4.1 years ago by ▴ 50 • written 5.4 years ago by ▴ 420
0
votes
1
reply
1.9k
views
Passing gene expression count table into velocyto
velocyto singlecellrnaseq rnaseq rnavelocity
updated 5.4 years ago by ▴ 840 • written 5.7 years ago by ▴ 420
125 results • Page 1 of 3
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