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3
votes
12
replies
9.0k
views
7 follow
Remove ensembl identifiers from Seurat
seurat rstudio RNA-Seq
updated 10 months ago by • 0 • written 4.4 years ago by ▴ 410
0
votes
1
reply
1.9k
views
Comment: Comment: Loops for Seurat functions
2.0 years ago by V ▴ 410
2
votes
3
replies
1.9k
views
Loops for Seurat functions
seurat R
updated 2.0 years ago by 4.5k • written 2.0 years ago by ▴ 410
0
votes
1
reply
5.5k
views
Comment: Comment: Remove ribosomal genes in single-cell RNAseq analysis?
2.2 years ago by V ▴ 410
0
votes
0
replies
1.3k
views
Comment: Comment: Detecting outlier in single cell multiome data.
2.2 years ago by V ▴ 410
0
votes
1
reply
1.3k
views
Comment: Comment: Detecting outlier in single cell multiome data.
2.2 years ago by V ▴ 410
0
votes
1
reply
1.3k
views
Comment: Comment: Detecting outlier in single cell multiome data.
2.2 years ago by V ▴ 410
1
vote
1
reply
1.3k
views
Answer: Answer: Detecting outlier in single cell multiome data.
2.2 years ago by V ▴ 410
1
vote
1
reply
5.5k
views
Answer: Answer: Remove ribosomal genes in single-cell RNAseq analysis?
2.2 years ago by V ▴ 410
8
votes
5
replies
12k
views
scVelo on Seurat umap
Seurat scVelo RNA
updated 2.2 years ago by ▴ 10 • written 4.5 years ago by ▴ 410
0
votes
0
replies
700
views
Comment: Comment: Identify predicted TF targets by binding motif
2.8 years ago by V ▴ 410
0
votes
2
replies
700
views
Identify predicted TF targets by binding motif
atac-seq multiome chromatin Seurat
2.8 years ago by V ▴ 410
5
votes
1
reply
3.6k
views
Change location of 'fragments' in multiome Seurat file
RNA-Seq R Seurat Signac ATAC-Seq
3.2 years ago by V ▴ 410
5
votes
0
replies
3.6k
views
Answer: Answer: Change location of 'fragments' in multiome Seurat file
3.2 years ago by V ▴ 410
1
vote
1
reply
3.3k
views
Comment: Comment: Can not detect spliced / unspliced counts
3.4 years ago by V ▴ 410
1
vote
1
reply
3.3k
views
Comment: Comment: Can not detect spliced / unspliced counts
3.4 years ago by V ▴ 410
0
votes
0
replies
1.2k
views
Issue renaming clusters in Python
seurat python
3.5 years ago by V ▴ 410
0
votes
1
reply
1.1k
views
Comment: C: Annotating peaks with genes
3.8 years ago by V ▴ 410
1
vote
3
replies
1.1k
views
Annotating peaks with genes
atac-seq atac multiome singlecell
updated 3.9 years ago by ★ 18k • written 3.9 years ago by ▴ 410
0
votes
0
replies
2.9k
views
Comment: C: Help with Rstudio in Anaconda Navigator
4.1 years ago by V ▴ 410
0
votes
0
replies
2.9k
views
Answer: A: Help with Rstudio in Anaconda Navigator
4.1 years ago by V ▴ 410
0
votes
3
replies
2.9k
views
Help with Rstudio in Anaconda Navigator
anaconda RStudio Ubuntu
4.1 years ago by V ▴ 410
0
votes
0
replies
673
views
TF regulatory network reconstruction from single cell
scRNAseq Seurat
updated 4.3 years ago by 12k • written 4.3 years ago by ▴ 410
4
votes
2
replies
9.6k
views
Running scVelo on Seurat
RNA-Seq velocity singlecell Seurat
updated 4.4 years ago by ▴ 30 • written 4.5 years ago by ▴ 410
0
votes
0
replies
20k
views
Comment: C: Re-arrange conditions in Seurat
4.4 years ago by V ▴ 410
0
votes
0
replies
20k
views
Comment: C: Re-arrange conditions in Seurat
4.4 years ago by V ▴ 410
0
votes
1
reply
20k
views
Comment: C: Re-arrange conditions in Seurat
4.4 years ago by V ▴ 410
4
votes
9
replies
20k
views
Re-arrange conditions in Seurat
seurat rnaseq
updated 4.4 years ago by 3.2k • written 4.4 years ago by ▴ 410
0
votes
1
reply
20k
views
Comment: C: Re-arrange conditions in Seurat
4.4 years ago by V ▴ 410
0
votes
0
replies
9.0k
views
Comment: C: Remove ensembl identifiers from Seurat
4.4 years ago by V ▴ 410
0
votes
2
replies
9.0k
views
Comment: C: Remove ensembl identifiers from Seurat
4.4 years ago by V ▴ 410
0
votes
0
replies
9.0k
views
Comment: C: Remove ensembl identifiers from Seurat
4.4 years ago by V ▴ 410
0
votes
0
replies
2.8k
views
Comment: C: pre-mRNA GTF reference for 10x
4.5 years ago by V ▴ 410
1
vote
5
replies
2.8k
views
pre-mRNA GTF reference for 10x
singlecellRNAseq gtf singlecell velocity RNA
updated 4.5 years ago by ▴ 710 • written 4.5 years ago by ▴ 410
2
votes
0
replies
1.8k
views
Answer: C: KEGG pathway gene lists differ between sources
4.5 years ago by V ▴ 410
0
votes
0
replies
2.8k
views
Comment: C: pre-mRNA GTF reference for 10x
4.5 years ago by V ▴ 410
0
votes
1
reply
3.3k
views
Comment: C: Can not detect spliced / unspliced counts
4.5 years ago by V ▴ 410
2
votes
7
replies
3.3k
views
Can not detect spliced / unspliced counts
rnaseq RNA velocity scVelo
updated 3.4 years ago by • 0 • written 4.5 years ago by ▴ 410
0
votes
0
replies
9.6k
views
Comment: C: Running scVelo on Seurat
4.5 years ago by V ▴ 410
0
votes
0
replies
2.2k
views
Comment: C: Seurat FeaturePlot across stims
4.5 years ago by V ▴ 410
0
votes
0
replies
12k
views
Comment: C: scVelo on Seurat umap
4.5 years ago by V ▴ 410
1
vote
2
replies
2.2k
views
Seurat FeaturePlot across stims
seurat Seurat rstudio
4.5 years ago by V ▴ 410
0
votes
0
replies
1.2k
views
Comment: C: Subsetting Genes from Clusters
4.6 years ago by V ▴ 410
2
votes
3
replies
1.2k
views
Subsetting Genes from Clusters
rstudio seurat r dataframes
4.6 years ago by V ▴ 410
0
votes
0
replies
47k
views
Comment: C: Extracting cells only from one condition (Seurat)
4.6 years ago by V ▴ 410
0
votes
1
reply
47k
views
Comment: C: Extracting cells only from one condition (Seurat)
4.6 years ago by V ▴ 410
0
votes
1
reply
3.5k
views
Comment: C: Cluster using known marker genes (Seurat)
4.7 years ago by V ▴ 410
1
vote
3
replies
3.5k
views
Cluster using known marker genes (Seurat)
seurat single cell rnaseq rstudio rnaset
updated 4.7 years ago by 3.2k • written 4.7 years ago by ▴ 410
22
votes
7
replies
47k
views
Extracting cells only from one condition (Seurat)
single cell rnaseq seurat RNA-Seq R
updated 3.6 years ago by ▴ 50 • written 4.8 years ago by ▴ 410
0
votes
1
reply
1.8k
views
Passing gene expression count table into velocyto
velocyto singlecellrnaseq rnaseq rnavelocity
updated 4.8 years ago by ▴ 830 • written 5.1 years ago by ▴ 410
125 results • Page 1 of 3
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