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DESeq2 with a small number of genes
DESeq2 SARTools RNA-Seq Count-normalisation
updated 3.3 years ago by ▴ 90 • written 8.1 years ago by ▴ 660
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0
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3.0k
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Answer: A: How to judge the similarity of two genes from the alignment?
updated 5.0 years ago by 44k • written 9.1 years ago by ▴ 660
1
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0
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1.7k
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Answer: A: How to map sequences to existing phylogenetic tree
updated 5.0 years ago by 44k • written 9.1 years ago by ▴ 660
3
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1.8k
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Answer: Answer: Why not Windows
updated 20 months ago by 44k • written 9.1 years ago by ▴ 660
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4.5k
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Answer: A: Phred Score/Base quality score in Pysam
updated 5.0 years ago by 44k • written 9.2 years ago by ▴ 660
1
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1
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3.3k
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Answer: A: Wrapping protein sequence output using python
updated 5.0 years ago by 44k • written 9.2 years ago by ▴ 660
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1
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2.4k
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Comment: C: Trim barcode 3'
updated 5.0 years ago by 44k • written 9.2 years ago by ▴ 660
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0
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3.6k
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Answer: A: Downloading protein sequences for a set of chromosomes from NCBI
updated 5.0 years ago by 44k • written 9.2 years ago by ▴ 660
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0
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4.1k
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Answer: A: docking site in pymol
updated 5.0 years ago by 44k • written 9.3 years ago by ▴ 660
7
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1
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39k
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Answer: A: nr- protein database
updated 5.0 years ago by 44k • written 9.3 years ago by ▴ 660
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0
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2.9k
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Comment: C: NGS microRNA (smRNA) analysis
updated 5.0 years ago by 44k • written 9.3 years ago by ▴ 660
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0
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2.1k
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Answer: A: Parsing error using Entrez.read (BioPython)
updated 5.0 years ago by 44k • written 9.3 years ago by ▴ 660
2
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0
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3.1k
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Answer: Answer: Replacement of fasta file header
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 660
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0
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1.3k
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Answer: A: removing a part of sequence of all genes
7.1 years ago by glihm ▴ 660
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1
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2.3k
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Answer: A: transcript and fasta sequence
7.1 years ago by glihm ▴ 660
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2.3k
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Comment: C: transcript and fasta sequence
7.1 years ago by glihm ▴ 660
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1.5k
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Comment: C: formatting problem (awk/bash)
7.1 years ago by glihm ▴ 660
1
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1
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1.3k
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Comment: C: How can I replace pathway names with gene names?
7.1 years ago by glihm ▴ 660
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0
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1.8k
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Comment: C: RPKM documentation is needed!
7.1 years ago by glihm ▴ 660
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2
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3.4k
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Comment: C: warning message after Deseq2
7.1 years ago by glihm ▴ 660
3
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1
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8.3k
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Answer: A: how to remove Overrepresented sequences for paired end with cutadapt?
7.1 years ago by glihm ▴ 660
1
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1
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2.6k
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Comment: C: Sam FLAGS : how could a read be described as "read unmapped" but "read in revers
7.1 years ago by glihm ▴ 660
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0
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4.0k
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Comment: C: Choosing sam flags to extract all reads mapped to 5' -> 3' OR 3' -> 5' of refere
7.1 years ago by glihm ▴ 660
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1
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3.3k
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Comment: C: fastx toolkit error
7.1 years ago by glihm ▴ 660
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0
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3.3k
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Comment: C: fastx toolkit error
7.1 years ago by glihm ▴ 660
1
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1
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1.5k
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Comment: C: Delete ID only if not presnt in next line (lines are in pair)
7.1 years ago by glihm ▴ 660
0
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1
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4.0k
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Answer: A: Choosing sam flags to extract all reads mapped to 5' -> 3' OR 3' -> 5' of refere
7.1 years ago by glihm ▴ 660
2
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1
reply
2.6k
views
Answer: A: Sam FLAGS : how could a read be described as "read unmapped" but "read in revers
7.1 years ago by glihm ▴ 660
0
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1
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4.0k
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Comment: C: Choosing sam flags to extract all reads mapped to 5' -> 3' OR 3' -> 5' of refere
7.1 years ago by glihm ▴ 660
2
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1
reply
4.0k
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Answer: A: Removing rRNA,tRNA,snoRNA, etc from miRNA sequence data
7.1 years ago by glihm ▴ 660
0
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0
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2.1k
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Comment: C: Need help to retrive sequences
7.1 years ago by glihm ▴ 660
0
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1
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2.3k
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Answer: A: counting the reads that mapped to a part of transcriptome
7.1 years ago by glihm ▴ 660
1
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0
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1.5k
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Answer: A: general question about strand D and R
7.1 years ago by glihm ▴ 660
0
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0
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1.5k
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Comment: C: general question about strand D and R
7.1 years ago by glihm ▴ 660
1
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0
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6.4k
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Comment: C: Selecting One Ensembl Transcript Id For Each Ensembl Gene Id
7.1 years ago by glihm ▴ 660
0
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1
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1.9k
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Comment: C: Using SeqAn and other external libraries in C++
7.1 years ago by glihm ▴ 660
1
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1
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1.4k
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Comment: C: isolating in frame reads from a file
7.1 years ago by glihm ▴ 660
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0
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1.4k
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Answer: A: isolating in frame reads from a file
7.1 years ago by glihm ▴ 660
1
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0
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2.2k
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Answer: A: bowtie -n aligment mode
7.1 years ago by glihm ▴ 660
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0
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3.3k
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Comment: C: Trim Primers from FASTQ file
7.2 years ago by glihm ▴ 660
0
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0
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5.9k
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Comment: C: Python Regular Expressions to extract the transcript ID from lines of GTF file
7.2 years ago by glihm ▴ 660
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0
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5.9k
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Comment: C: Python Regular Expressions to extract the transcript ID from lines of GTF file
7.2 years ago by glihm ▴ 660
0
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1
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5.9k
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Answer: A: Python Regular Expressions to extract the transcript ID from lines of GTF file
7.2 years ago by glihm ▴ 660
0
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0
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2.8k
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Comment: C: Problems getting read number per gene after sequencing
7.3 years ago by glihm ▴ 660
1
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1
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2.8k
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Answer: A: Problems getting read number per gene after sequencing
7.3 years ago by glihm ▴ 660
3
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0
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4.5k
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Answer: A: how to adjust BAM header after extracting only mapped reads from BAM files
7.3 years ago by glihm ▴ 660
0
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0
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3.8k
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Answer: A: Splitting a fasta file on the basis of header barcodes
7.4 years ago by glihm ▴ 660
2
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0
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1.4k
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Answer: A: slect reference genes from transriptome data
7.4 years ago by glihm ▴ 660
0
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1
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3.6k
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Comment: C: Blast+ Sam outfmt parameter check
7.4 years ago by glihm ▴ 660
2
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0
replies
1.9k
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Answer: A: Fastx tools no output?
7.4 years ago by glihm ▴ 660
107 results • Page 1 of 3
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