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Comment: C: IGV: Is there a way to visualise only 5' OR 3' of reads
8.2 years ago by glihm ▴ 660
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Comment: C: IGV: Is there a way to visualise only 5' OR 3' of reads
8.2 years ago by glihm ▴ 660
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2.1k
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IGV: Is there a way to visualise only 5' OR 3' of reads
IGV RNA-Seq
8.2 years ago by glihm ▴ 660
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Comment: C: reduced quality of lane 4 compared to other lanes (paired-end Illumina)
8.3 years ago by glihm ▴ 660
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Answer: A: Sample .sam file
8.3 years ago by glihm ▴ 660
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Comment: C: DESeq2 with a small number of genes
8.3 years ago by glihm ▴ 660
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4.1k
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Comment: C: DESeq2 with a small number of genes
8.3 years ago by glihm ▴ 660
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Comment: C: DESeq2 with a small number of genes
8.3 years ago by glihm ▴ 660
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4.1k
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Comment: C: DESeq2 with a small number of genes
8.3 years ago by glihm ▴ 660
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Answer: A: Tools For Metagenomic Data Analysis
8.3 years ago by glihm ▴ 660
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Answer: A: How can i custom the reference database that i want to use in QIIME?
8.3 years ago by glihm ▴ 660
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Answer: A: How can I separate a FASTA file into multiple exon and CDS files?
8.4 years ago by glihm ▴ 660
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1.3k
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Comment: C: upstream open reading frame gene filteration
8.4 years ago by glihm ▴ 660
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Comment: C: How Many Reads In A Bam File Are Aligned To a Specific Region
8.4 years ago by glihm ▴ 660
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9.1k
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Comment: C: How do I find unmapped reads in my sam file?
8.4 years ago by glihm ▴ 660
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3.6k
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Comment: C: How to know intron lenghts
8.4 years ago by glihm ▴ 660
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Answer: A: Tophat --max-multihits option
8.4 years ago by glihm ▴ 660
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Comment: C: Multithreading Python3 + Samtools
8.4 years ago by glihm ▴ 660
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2.4k
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Multithreading Python3 + Samtools
Python3 Samtools Multithreading RNA-Seq
updated 8.4 years ago by 105k • written 8.4 years ago by ▴ 660
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Comment: C: Could not find rRNA genes (28S, 18S, 5.8S and 5S) in human_genes.gtf file?
9.3 years ago by glihm ▴ 660
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5.3k
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Comment: C: How to find duplicate values in two columns and move them to a third?
9.3 years ago by glihm ▴ 660
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8.7k
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Comment: C: Problems Installing Biopython On Mac
9.4 years ago by glihm ▴ 660
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13k
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Comment: Comment: Run BLAST on Linux terminal
updated 2.5 years ago by 44k • written 9.4 years ago by ▴ 660
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1.8k
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Answer: Answer: The first amplicon librariesis is needed to analyse the 16S data?
updated 2.4 years ago by 44k • written 9.4 years ago by ▴ 660
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Answer: Answer: "deletions.bed" file of tophat2 output' s mean.
updated 2.4 years ago by 44k • written 9.4 years ago by ▴ 660
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3.5k
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Comment: C: Wrapping protein sequence output using python
9.4 years ago by glihm ▴ 660
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1
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4.1k
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Comment: Comment: How to create perl script for comparing two sequence files and print the matchin
updated 2.4 years ago by 44k • written 9.4 years ago by ▴ 660
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2.9k
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Comment: C: Best tool for Quality Assessment for Next Generation Sequencing Data?
9.4 years ago by glihm ▴ 660
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2.9k
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Answer: Answer: Best tool for Quality Assessment for Next Generation Sequencing Data?
updated 2.4 years ago by 44k • written 9.4 years ago by ▴ 660
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Answer: Answer: IGV: genome_alias.tab is not taken in account
9.4 years ago by glihm ▴ 660
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1
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2.0k
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IGV: genome_alias.tab is not taken in account
alias igv
9.4 years ago by glihm ▴ 660
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Comment: C: R: extract interest nucleotide from BAM files (BS-Seq)
9.4 years ago by glihm ▴ 660
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1
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2.7k
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Answer: Answer: R: extract interest nucleotide from BAM files (BS-Seq)
updated 2.4 years ago by 44k • written 9.4 years ago by ▴ 660
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1
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5.1k
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Answer: Answer: sequence alignment vs mapping
updated 2.4 years ago by 44k • written 9.4 years ago by ▴ 660
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2.9k
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Comment: Comment: Disrupted protein structure after 5 nanoseconds of GROMACS molecular dynamics
updated 2.4 years ago by 44k • written 9.4 years ago by ▴ 660
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5.1k
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Comment: C: sequence alignment vs mapping
9.4 years ago by glihm ▴ 660
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1
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12k
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Comment: C: problem with installation of package ggplot2
9.5 years ago by glihm ▴ 660
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1
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12k
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Comment: A: problem with installation of package ggplot2
9.5 years ago by glihm ▴ 660
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12k
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Comment: C: problem with installation of package ggplot2
9.5 years ago by glihm ▴ 660
3
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1
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9.9k
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Answer: Answer: how to change colors in jitter plots (ggplot2)?
updated 2.4 years ago by 44k • written 9.5 years ago by ▴ 660
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4.9k
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Answer: Answer: Where to get some example metagenomics data?
updated 2.4 years ago by 44k • written 9.5 years ago by ▴ 660
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0
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3.8k
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Comment: Comment: Downloading protein sequences for a set of chromosomes from NCBI
updated 2.4 years ago by 44k • written 9.5 years ago by ▴ 660
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2.1k
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Answer: Answer: Convert reads alginment results of NGS metagenomic sample into abundance score
updated 2.4 years ago by 44k • written 9.5 years ago by ▴ 660
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Answer: Answer: How can I make the loop to count the gene against query id
updated 2.4 years ago by 44k • written 9.5 years ago by ▴ 660
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1.6k
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Answer: Answer: Getting the genomic positions for a set of protein sequences
updated 2.4 years ago by 44k • written 9.5 years ago by ▴ 660
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1
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5.1k
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Comment: Comment: Subject Sequence Id from Blast results
updated 2.4 years ago by 44k • written 9.5 years ago by ▴ 660
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2.4k
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Answer: Answer: Question: Unifying RNAseq read length
updated 2.4 years ago by 44k • written 9.5 years ago by ▴ 660
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1
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29k
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Comment: C: ggplot2 graphs are empty
9.5 years ago by glihm ▴ 660
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4.0k
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Answer: Answer: parsing a multiple sequence alignment file
updated 2.4 years ago by 44k • written 9.5 years ago by ▴ 660
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0
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2.6k
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Answer: Answer: Fastest and memory efficient tool for 16S RNA counts
updated 2.4 years ago by 44k • written 9.5 years ago by ▴ 660
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