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News: The Biostar Handbook. A bioinformatics e-book for beginners.
training handbook
updated 9 weeks ago by 3.1k • written 8.0 years ago by 101k
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Answer: Answer: Can I combine variants called using T2T-CHM13 with GRCh38?
15 hours ago by Istvan Albert 101k
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Comment: Comment: MISO Sorted BAM file header mismatch
15 hours ago by Istvan Albert 101k
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Answer: Answer: Using reference genome for GSEA for different strains of the same bacterial spec
17 hours ago by Istvan Albert 101k
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269
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Comment: Comment: Can germline callers detect somatic variants? (RNAseq, cancer, no matched normal
17 hours ago by Istvan Albert 101k
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Answer: Answer: lncRNA and mRNA analysis on Total RNA Sequencing data
17 hours ago by Istvan Albert 101k
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Answer: Answer: BSQR in GATK without known variants
18 hours ago by Istvan Albert 101k
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Answer: Answer: IGV: first bases of each chromosomes missing when loading genome file
18 hours ago by Istvan Albert 101k
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269
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Answer: Answer: Can germline callers detect somatic variants? (RNAseq, cancer, no matched normal
18 hours ago by Istvan Albert 101k
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161
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Answer: Answer: Combine GBS and WGS data for variant calling in GWAS analysis
18 hours ago by Istvan Albert 101k
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Comment: Comment: Can I combine the GBS data with Whole Genome Resequencing for GWAS analysis
1 day ago by Istvan Albert 101k
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251
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Answer: Answer: Workstation RAM speed vs capacity
1 day ago by Istvan Albert 101k
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260
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Comment: Comment: Need to remove duplicates from GBS data?
1 day ago by Istvan Albert 101k
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260
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Answer: Answer: Need to remove duplicates from GBS data?
2 days ago by Istvan Albert 101k
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421
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Answer: Answer: Confused by reference files
13 days ago by Istvan Albert 101k
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491
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Comment: Comment: Avoiding the Pitfalls of the Anaconda License: A Practical Guide
13 days ago by Istvan Albert 101k
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36k
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Comment: Comment: Heatmaps in R
6 weeks ago by Istvan Albert 101k
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Answer: Answer: Performing Needleman-Wunsch Global Alignment for multiple mutant proteins agains
7 weeks ago by Istvan Albert 101k
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249
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Answer: Answer: Long-read sequencing data simulation using CAMISIM
7 weeks ago by Istvan Albert 101k
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855
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Comment: Comment: The Evolution of NGS: What’s New and What’s Next?
7 weeks ago by Istvan Albert 101k
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474
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Comment: Comment: Choosing the Best Method for DEG Analysis: limma vs. DESeq2 for RSEM Normalized
7 weeks ago by Istvan Albert 101k
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584
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Answer: Answer: Issue understanding ATAC-seq PCA
7 weeks ago by Istvan Albert 101k
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709
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Answer: Answer: Kraken classified based on 1 mer
7 weeks ago by Istvan Albert 101k
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474
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Answer: Answer: Choosing the Best Method for DEG Analysis: limma vs. DESeq2 for RSEM Normalized
7 weeks ago by Istvan Albert 101k
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416
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Answer: Answer: Trimmomatic 0.39 fails for adapters
7 weeks ago by Istvan Albert 101k
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1.8k
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Comment: Comment: Help Choosing a Workstation for a New Bioinformatics Service
8 weeks ago by Istvan Albert 101k
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1.8k
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Comment: Comment: Help Choosing a Workstation for a New Bioinformatics Service
9 weeks ago by Istvan Albert 101k
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Answer: Answer: Help Choosing a Workstation for a New Bioinformatics Service
9 weeks ago by Istvan Albert 101k
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727
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Answer: Answer: Estimating transcript integrity after cDNA sequencing for long read data (Nanopo
10 weeks ago by Istvan Albert 101k
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469
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Comment: Comment: Getting a list of up- and downregulated genes using DESeq2
10 weeks ago by Istvan Albert 101k
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469
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Answer: Answer: Getting a list of up- and downregulated genes using DESeq2
10 weeks ago by Istvan Albert 101k
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3.4k
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Comment: Comment: 2nd Edition of the Biostar Handbook. New online course starts now.
11 weeks ago by Istvan Albert 101k
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680
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Comment: Comment: LD Pruning in GWAS
11 weeks ago by Istvan Albert 101k
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650
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Comment: Comment: Extracting human exome from GTF file
11 weeks ago by Istvan Albert 101k
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650
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Answer: Answer: Extracting human exome from GTF file
12 weeks ago by Istvan Albert 101k
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650
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Comment: Comment: The Biostar Herald for Monday, July 22, 2024
3 months ago by Istvan Albert 101k
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650
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Comment: Comment: The Biostar Herald for Monday, July 22, 2024
3 months ago by Istvan Albert 101k
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669
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Comment: Comment: GSEA vs GO-enrichemnt analysis
3 months ago by Istvan Albert 101k
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544
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Answer: Answer: To randomly generate a list of insertions and deletions
3 months ago by Istvan Albert 101k
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544
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Comment: Comment: To randomly generate a list of insertions and deletions
3 months ago by Istvan Albert 101k
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352
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Comment: Comment: Why is one mate not in proper pair in one case, when it is in proper pair in a v
3 months ago by Istvan Albert 101k
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Answer: Answer: How to improve a bioinformatics study and paper so that it is not considered "to
4 months ago by Istvan Albert 101k
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254
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Tool: GeneScape: A Python package for gene ontology visualization
ontology GO
5 months ago by Istvan Albert 101k
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689
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Comment: Comment: Can I assemble chloroplast genome of plants using SRA data from NCBI and I can p
5 months ago by Istvan Albert 101k
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689
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Comment: Comment: Can I assemble chloroplast genome of plants using SRA data from NCBI and I can p
5 months ago by Istvan Albert 101k
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689
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Answer: Answer: Can I assemble chloroplast genome of plants using SRA data from NCBI and I can p
5 months ago by Istvan Albert 101k
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2.6k
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Comment: Comment: How do I create a gff(3) file from a genebank file?
5 months ago by Istvan Albert 101k
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630
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Answer: Answer: Cannot install bwa-mem2 via conda
6 months ago by Istvan Albert 101k
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638
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Comment: Comment: Converting Degree Minutes (DM) to Decimal Degrees (DD) using python script
6 months ago by Istvan Albert 101k
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723
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Comment: Comment: different FeatureCounts output for the same data
6 months ago by Istvan Albert 101k
5,964 results • Page 1 of 120
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