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News: The Biostar Handbook. A bioinformatics e-book for beginners.
training handbook
updated 9 weeks ago by 3.1k • written 8.0 years ago by 101k
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Answer: Answer: Seeking a tool for enrichment of a small list of ranked genes
1 day ago by Istvan Albert 101k
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167
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Answer: Answer: Estimate error-rate and assembly oftion for FLYE assembler
1 day ago by Istvan Albert 101k
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Comment: Comment: Gene locus and gene ID
1 day ago by Istvan Albert 101k
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Comment: Comment: MISO Sorted BAM file header mismatch
1 day ago by Istvan Albert 101k
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Comment: Comment: Any Paper: Ultra-fast QA and literature search based on Pubmed papers.
1 day ago by Istvan Albert 101k
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Answer: Answer: How many genes is required for ORA analysis?
1 day ago by Istvan Albert 101k
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Answer: Answer: Giraffe DeepVariant workflow
2 days ago by Istvan Albert 101k
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Comment: Comment: IGV: first bases of each chromosomes missing when loading genome file
2 days ago by Istvan Albert 101k
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313
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Answer: Answer: Can I combine variants called using T2T-CHM13 with GRCh38?
3 days ago by Istvan Albert 101k
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249
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Comment: Comment: MISO Sorted BAM file header mismatch
3 days ago by Istvan Albert 101k
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Answer: Answer: Using reference genome for GSEA for different strains of the same bacterial spec
3 days ago by Istvan Albert 101k
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Comment: Comment: Can germline callers detect somatic variants? (RNAseq, cancer, no matched normal
3 days ago by Istvan Albert 101k
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207
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Answer: Answer: lncRNA and mRNA analysis on Total RNA Sequencing data
3 days ago by Istvan Albert 101k
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211
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Answer: Answer: BSQR in GATK without known variants
3 days ago by Istvan Albert 101k
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374
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Answer: Answer: IGV: first bases of each chromosomes missing when loading genome file
3 days ago by Istvan Albert 101k
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376
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Answer: Answer: Can germline callers detect somatic variants? (RNAseq, cancer, no matched normal
3 days ago by Istvan Albert 101k
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296
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Answer: Answer: Combine GBS and WGS data for variant calling in GWAS analysis
3 days ago by Istvan Albert 101k
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Comment: Comment: Can I combine the GBS data with Whole Genome Resequencing for GWAS analysis
4 days ago by Istvan Albert 101k
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312
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Answer: Answer: Workstation RAM speed vs capacity
4 days ago by Istvan Albert 101k
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298
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Comment: Comment: Need to remove duplicates from GBS data?
4 days ago by Istvan Albert 101k
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298
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Answer: Answer: Need to remove duplicates from GBS data?
4 days ago by Istvan Albert 101k
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432
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Answer: Answer: Confused by reference files
16 days ago by Istvan Albert 101k
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510
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Comment: Comment: Avoiding the Pitfalls of the Anaconda License: A Practical Guide
16 days ago by Istvan Albert 101k
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36k
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Comment: Comment: Heatmaps in R
6 weeks ago by Istvan Albert 101k
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638
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Answer: Answer: Performing Needleman-Wunsch Global Alignment for multiple mutant proteins agains
7 weeks ago by Istvan Albert 101k
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253
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Answer: Answer: Long-read sequencing data simulation using CAMISIM
7 weeks ago by Istvan Albert 101k
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866
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Comment: Comment: The Evolution of NGS: What’s New and What’s Next?
7 weeks ago by Istvan Albert 101k
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485
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Comment: Comment: Choosing the Best Method for DEG Analysis: limma vs. DESeq2 for RSEM Normalized
7 weeks ago by Istvan Albert 101k
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590
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Answer: Answer: Issue understanding ATAC-seq PCA
8 weeks ago by Istvan Albert 101k
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Answer: Answer: Kraken classified based on 1 mer
8 weeks ago by Istvan Albert 101k
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485
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Answer: Answer: Choosing the Best Method for DEG Analysis: limma vs. DESeq2 for RSEM Normalized
8 weeks ago by Istvan Albert 101k
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419
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Answer: Answer: Trimmomatic 0.39 fails for adapters
8 weeks ago by Istvan Albert 101k
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Comment: Comment: Help Choosing a Workstation for a New Bioinformatics Service
9 weeks ago by Istvan Albert 101k
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1.8k
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Comment: Comment: Help Choosing a Workstation for a New Bioinformatics Service
10 weeks ago by Istvan Albert 101k
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1.8k
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Answer: Answer: Help Choosing a Workstation for a New Bioinformatics Service
10 weeks ago by Istvan Albert 101k
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735
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Answer: Answer: Estimating transcript integrity after cDNA sequencing for long read data (Nanopo
11 weeks ago by Istvan Albert 101k
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473
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Comment: Comment: Getting a list of up- and downregulated genes using DESeq2
11 weeks ago by Istvan Albert 101k
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473
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Answer: Answer: Getting a list of up- and downregulated genes using DESeq2
11 weeks ago by Istvan Albert 101k
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Comment: Comment: 2nd Edition of the Biostar Handbook. New online course starts now.
11 weeks ago by Istvan Albert 101k
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698
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Comment: Comment: LD Pruning in GWAS
12 weeks ago by Istvan Albert 101k
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654
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Comment: Comment: Extracting human exome from GTF file
12 weeks ago by Istvan Albert 101k
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654
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Answer: Answer: Extracting human exome from GTF file
12 weeks ago by Istvan Albert 101k
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659
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Comment: Comment: The Biostar Herald for Monday, July 22, 2024
3 months ago by Istvan Albert 101k
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659
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Comment: Comment: The Biostar Herald for Monday, July 22, 2024
3 months ago by Istvan Albert 101k
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678
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Comment: Comment: GSEA vs GO-enrichemnt analysis
3 months ago by Istvan Albert 101k
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547
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Answer: Answer: To randomly generate a list of insertions and deletions
3 months ago by Istvan Albert 101k
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547
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Comment: Comment: To randomly generate a list of insertions and deletions
3 months ago by Istvan Albert 101k
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358
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Comment: Comment: Why is one mate not in proper pair in one case, when it is in proper pair in a v
3 months ago by Istvan Albert 101k
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1.2k
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Answer: Answer: How to improve a bioinformatics study and paper so that it is not considered "to
4 months ago by Istvan Albert 101k
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