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comments
0
votes
0
replies
179
views
Comment:
Comment: Bedtools merge minimum overlap?
20 hours ago by
Alex Reynolds
35k
2
votes
1
reply
649
views
Answer:
Answer: Create a new bed file with all pairwise combinations between two other bed files
6 days ago by
Alex Reynolds
35k
3
votes
1
reply
1.5k
views
Comment:
Comment: Bioinformatician who was retaliated against after reporting discriminatory haras
18 days ago by
Alex Reynolds
35k
1
vote
0
replies
312
views
Answer:
Answer: How to highlight genes on genome visual reprezentation/what tool to use?
20 days ago by
Alex Reynolds
35k
1
vote
0
replies
7.7k
views
Comment:
Comment: Intersect multiple BED files
5 weeks ago by
Alex Reynolds
35k
0
votes
1
reply
450
views
Comment:
Comment: Coverage depth map of genome from multiple sample coverage bedgraphs?
5 weeks ago by
Alex Reynolds
35k
0
votes
0
replies
353
views
Answer:
Answer: Error occurs when migrate-n software performs "make mpis"
5 weeks ago by
Alex Reynolds
35k
0
votes
1
reply
450
views
Comment:
Comment: Coverage depth map of genome from multiple sample coverage bedgraphs?
5 weeks ago by
Alex Reynolds
35k
1
vote
1
reply
450
views
Answer:
Answer: Coverage depth map of genome from multiple sample coverage bedgraphs?
5 weeks ago by
Alex Reynolds
35k
0
votes
0
replies
740
views
Answer:
Answer: Convert Gene symbol to Ensembl ID
7 weeks ago by
Alex Reynolds
35k
1
vote
0
replies
486
views
Comment:
Comment: Genes with multiple chromosome locations
8 weeks ago by
Alex Reynolds
35k
0
votes
1
reply
740
views
Comment:
Comment: Convert Gene symbol to Ensembl ID
8 weeks ago by
Alex Reynolds
35k
0
votes
1
reply
740
views
Comment:
Comment: Convert Gene symbol to Ensembl ID
8 weeks ago by
Alex Reynolds
35k
0
votes
0
replies
18k
views
Comment:
Comment: BEDOPS gtf2bed conversion error with Ensembl GTF
9 weeks ago by
Alex Reynolds
35k
0
votes
0
replies
467
views
Comment:
Comment: line 164: 15342 Segmentation fault (core dumped) ${cmd} ${options} - 0<&0
10 weeks ago by
Alex Reynolds
35k
2
votes
0
replies
467
views
Answer:
Answer: line 164: 15342 Segmentation fault (core dumped) ${cmd} ${options} - 0<&0
10 weeks ago by
Alex Reynolds
35k
0
votes
0
replies
676
views
Comment:
Comment: Random Access remote BAM files
11 weeks ago by
Alex Reynolds
35k
0
votes
1
reply
676
views
Comment:
Comment: Random Access remote BAM files
11 weeks ago by
Alex Reynolds
35k
0
votes
1
reply
676
views
Comment:
Comment: Random Access remote BAM files
11 weeks ago by
Alex Reynolds
35k
0
votes
1
reply
676
views
Answer:
Answer: Random Access remote BAM files
11 weeks ago by
Alex Reynolds
35k
2
votes
1
reply
440
views
Answer:
Answer: Double counts with bedtools intersect?
3 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.3k
views
Comment:
Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
3 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.3k
views
Comment:
Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
3 months ago by
Alex Reynolds
35k
1
vote
1
reply
1.3k
views
Answer:
Answer: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
3 months ago by
Alex Reynolds
35k
0
votes
0
replies
381
views
Answer:
Answer: identify genes
4 months ago by
Alex Reynolds
35k
1
vote
2
replies
1.8k
views
Comment:
Comment: PanDepth, an ultra-fast and efficient genomic tool for coverage calculation
4 months ago by
Alex Reynolds
35k
0
votes
0
replies
605
views
Comment:
Comment: Where can I get a list of SNPs mapping overlapping genes in humans?
4 months ago by
Alex Reynolds
35k
0
votes
0
replies
605
views
Comment:
Comment: Where can I get a list of SNPs mapping overlapping genes in humans?
4 months ago by
Alex Reynolds
35k
3
votes
2
replies
605
views
Answer:
Answer: Where can I get a list of SNPs mapping overlapping genes in humans?
4 months ago by
Alex Reynolds
35k
0
votes
1
reply
3.4k
views
Comment:
Comment: Decoding MM and ML tags in .SAM file
5 months ago by
Alex Reynolds
35k
1
vote
0
replies
771
views
Answer:
Answer: Filter a BED file based on genome coordinates for gene names
5 months ago by
Alex Reynolds
35k
1
vote
0
replies
402
views
Answer:
Answer: distance between chip peaks and individual TSS
5 months ago by
Alex Reynolds
35k
0
votes
0
replies
606
views
Answer:
Answer: Simple tools for creation of figures of gene and protein structure
6 months ago by
Alex Reynolds
35k
0
votes
0
replies
525
views
Answer:
Answer: Visualize raw rna fastq file and aligned bam file
6 months ago by
Alex Reynolds
35k
1
vote
1
reply
5.9k
views
Comment:
Comment: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
6 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.2k
views
Comment:
Comment: Getting the overlap between two GTF files
7 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.2k
views
Comment:
Comment: Getting the overlap between two GTF files
7 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.2k
views
Answer:
Answer: Getting the overlap between two GTF files
7 months ago by
Alex Reynolds
35k
1
vote
1
reply
669
views
Comment:
Comment: Mapping SNP rsIds/ positions to genes coding for proteins
7 months ago by
Alex Reynolds
35k
1
vote
1
reply
669
views
Answer:
Answer: Mapping SNP rsIds/ positions to genes coding for proteins
7 months ago by
Alex Reynolds
35k
0
votes
0
replies
756
views
Answer:
Answer: BED files
7 months ago by
Alex Reynolds
35k
1
vote
1
reply
929
views
Comment:
Comment: Filter human transcription factors
7 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.5k
views
Comment:
Comment: Read block operation failed with BAM file
7 months ago by
Alex Reynolds
35k
0
votes
0
replies
452
views
Answer:
Answer: Visualize where kmers are on a reference genome
7 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.5k
views
Comment:
Comment: Read block operation failed with BAM file
7 months ago by
Alex Reynolds
35k
2
votes
8
replies
1.5k
views
Read block operation failed with BAM file
bgzip
samtools
bam
pysam
htslib
updated 7 months ago by
John Marshall
3.0k • written 7 months ago by
Alex Reynolds
35k
2
votes
0
replies
749
views
Answer:
Answer: Create 10,000bp windows for a SNP file and assign each SNP to its respective win
7 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.5k
views
Comment:
Comment: Read block operation failed with BAM file
7 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.7k
views
Comment:
Comment: bedops alternative for bedtools -unionbedg ?
7 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.7k
views
Comment:
Comment: bedops alternative for bedtools -unionbedg ?
7 months ago by
Alex Reynolds
35k
2,874 results • Page
1 of 58
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