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Comment: Comment: Cutadapt installation issues
updated 5.0 years ago by 44k • written 9.2 years ago by ▴ 110
0
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1
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11k
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Comment: C: Cutadapt installation issues
updated 5.0 years ago by 44k • written 9.2 years ago by ▴ 110
2
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3
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3.4k
views
Tools to find overlapping/common interactions between two networks
networks overlap
updated 2.3 years ago by 44k • written 9.1 years ago by ▴ 110
0
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0
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4.5k
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Comment: C: How to get counts data for allele specific expression analysis (ASE) from aligne
6.8 years ago by Naresh D J ▴ 110
0
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0
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4.5k
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Comment: C: How to get counts data for allele specific expression analysis (ASE) from aligne
6.8 years ago by Naresh D J ▴ 110
4
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7
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4.5k
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How to get counts data for allele specific expression analysis (ASE) from aligned bam files (RNA-seq data)?
RNA-Seq SNP ASE vcf
updated 6.8 years ago by ★ 1.9k • written 7.0 years ago by ▴ 110
0
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0
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4.5k
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Answer: A: How to get counts data for allele specific expression analysis (ASE) from aligne
6.9 years ago by Naresh D J ▴ 110
0
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0
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4.5k
views
Comment: C: How to get counts data for allele specific expression analysis (ASE) from aligne
7.0 years ago by Naresh D J ▴ 110
0
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4
replies
1.9k
views
How to map/align fastq sequences to scrambled sequences and quantify them
alignment next-gen sequence
7.3 years ago by Naresh D J ▴ 110
0
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0
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1.9k
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Comment: C: How to map/align fastq sequences to scrambled sequences
7.3 years ago by Naresh D J ▴ 110
0
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0
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1.9k
views
Comment: C: How to map/align fastq sequences to scrambled sequences
7.3 years ago by Naresh D J ▴ 110
0
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1
reply
1.9k
views
Comment: C: Where to download processed time course RNA-seq data in human?
8.2 years ago by Naresh D J ▴ 110
1
vote
6
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1.9k
views
Where to download processed time course RNA-seq data in human?
RNA-Seq R
updated 8.2 years ago by ▴ 890 • written 8.2 years ago by ▴ 110
0
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1
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1.9k
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Comment: C: Where to download processed time course RNA-seq data in human?
8.2 years ago by Naresh D J ▴ 110
0
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0
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2.1k
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Comment: C: design matrix for complicated experimental design in limma
8.3 years ago by Naresh D J ▴ 110
0
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0
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2.1k
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Comment: C: design matrix for complicated experimental design in limma
8.3 years ago by Naresh D J ▴ 110
0
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4
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2.1k
views
design matrix for complicated experimental design in limma
rna-seq microarray limma
updated 8.3 years ago by 104k • written 8.3 years ago by ▴ 110
14
votes
5
replies
4.6k
views
How to get nucleotide sequences for a given list of genomic positions.
ChIP-Seq sequence NGS
updated 8.4 years ago by ★ 4.5k • written 8.4 years ago by ▴ 110
0
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0
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4.6k
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Comment: C: How to get nucleotide sequences for a given list of genomic positions.
8.4 years ago by Naresh D J ▴ 110
0
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0
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2.2k
views
Comment: C: Select random lines from the given bed files following the same distribution as
8.5 years ago by Naresh D J ▴ 110
1
vote
5
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2.5k
views
How to separate chip-seq peaks which are enriched for known TFs motifs from given list of peaks
ChIP-Seq HOMER NGS data analysis
updated 8.5 years ago by ★ 5.2k • written 8.5 years ago by ▴ 110
0
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1
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2.5k
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Answer: A: How to separate chip-seq peaks which are enriched for known TFs motifs from give
8.5 years ago by Naresh D J ▴ 110
0
votes
1
reply
2.2k
views
Comment: C: Select random lines from the given bed files following the same distribution as
8.5 years ago by Naresh D J ▴ 110
0
votes
1
reply
2.2k
views
Comment: C: Select random lines from the given bed files following the same distribution as
8.5 years ago by Naresh D J ▴ 110
0
votes
6
replies
2.2k
views
Select random lines from the given bed files following the same distribution as given input file
ChIP-Seq bedtools
8.5 years ago by Naresh D J ▴ 110
1
vote
1
reply
3.8k
views
Best way to present the single cell RNA-seq data and bulk RNA-seq expression data together
RNA-Seq scRNA-seq Heatmap
8.6 years ago by Naresh D J ▴ 110
0
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0
replies
2.4k
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Comment: C: Subgroup significance testing
8.8 years ago by Naresh D J ▴ 110
0
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0
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4.9k
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Comment: C: How to separate htseq-count table to coding RNAs and non-coding RNAs
9.2 years ago by Naresh D J ▴ 110
0
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0
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4.9k
views
Comment: C: How to separate htseq-count table to coding RNAs and non-coding RNAs
9.2 years ago by Naresh D J ▴ 110
4
votes
10
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4.9k
views
How to separate htseq-count table to coding RNAs and non-coding RNAs
RNA-Seq htseq-count
updated 2.2 years ago by 44k • written 9.2 years ago by ▴ 110
0
votes
1
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4.9k
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Comment: Comment: How to separate htseq-count table to coding RNAs and non-coding RNAs
updated 2.2 years ago by 44k • written 9.2 years ago by ▴ 110
0
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2
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4.9k
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Comment: C: How to separate htseq-count table to coding RNAs and non-coding RNAs
9.2 years ago by Naresh D J ▴ 110
0
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0
replies
2.2k
views
Comment: C: Help with DEseq2 design matrix and DE expression analysis
9.2 years ago by Naresh D J ▴ 110
1
vote
2
replies
2.2k
views
Help with DEseq2 design matrix and DE expression analysis
RNA-Seq DEseq2
updated 2.2 years ago by 44k • written 9.2 years ago by ▴ 110
0
votes
1
reply
11k
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Comment: Comment: How to run the BLAST program with the un-mapped reads in bam format from tophat
updated 2.2 years ago by 44k • written 9.2 years ago by ▴ 110
0
votes
1
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11k
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Comment: C: How to run the BLAST program with the un-mapped reads in bam format from tophat
9.2 years ago by Naresh D J ▴ 110
15
votes
6
replies
11k
views
How to run the BLAST program with the un-mapped reads in bam format from tophat
RNA-Seq blast reads
updated 2.2 years ago by 44k • written 9.2 years ago by ▴ 110
2
votes
12
replies
11k
views
Cutadapt installation issues
RNA-Seq
updated 5.0 years ago by 44k • written 9.2 years ago by ▴ 110
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