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Comment: Comment: Is it necessary to do genotype quality filteration after snp calling with GATK
5 months ago by mufernando ▴ 10
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1.9k
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Comment: C: drosophila reference genome - flybase >6 - explanation of files
6.6 years ago by mufernando ▴ 10
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1
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1.6k
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Is the DGRP data phased?
next-gen vcf vcftools dgrp
updated 7.3 years ago by 20 • written 7.5 years ago by ▴ 10
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1.6k
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Comment: C: Is the DGRP data phased?
7.5 years ago by mufernando ▴ 10
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1
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6.1k
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Comment: C: Vcftools r2 Error: Insufficient sites remained after filtering or No data left
7.5 years ago by mufernando ▴ 10
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0
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3.9k
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Comment: C: snpEff database error
7.9 years ago by mufernando ▴ 10
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1
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1.8k
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Comment: C: How to retrieve BAM file from NCBI SRA
7.9 years ago by mufernando ▴ 10
2
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3
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1.8k
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How to retrieve BAM file from NCBI SRA
SRA NCBI BAM
7.9 years ago by mufernando ▴ 10
1
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1
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1.2k
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Determine the pool size - data from EBI
pooled-sequencing crisp next-gen
updated 8.2 years ago by 20 • written 8.3 years ago by ▴ 10
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1
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2.7k
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Comment: C: Annotate VCF with RepeatMasker
8.2 years ago by mufernando ▴ 10
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1
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2.7k
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Comment: C: Annotate VCF with RepeatMasker
8.2 years ago by mufernando ▴ 10
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4
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2.7k
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Annotate VCF with RepeatMasker
repeatmasker vcf
updated 8.2 years ago by ★ 2.3k • written 8.2 years ago by ▴ 10
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0
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3.5k
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Comment: C: Extract allele frequencies from VCF
8.2 years ago by mufernando ▴ 10
3
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2
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3.5k
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Extract allele frequencies from VCF
variant-calling crisp vcf
updated 8.2 years ago by ▴ 600 • written 8.2 years ago by ▴ 10
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1
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3.9k
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Comment: C: Variant calling results in polyploidy data
8.2 years ago by mufernando ▴ 10
4
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10
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3.9k
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Variant calling results in polyploidy data
next-gen pool-seq crisp vcftools
8.2 years ago by mufernando ▴ 10
0
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1
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3.9k
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Comment: C: Variant calling results in polyploidy data
8.2 years ago by mufernando ▴ 10
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1
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3.9k
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Comment: C: Variant calling results in polyploidy data
8.2 years ago by mufernando ▴ 10
0
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0
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3.9k
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Comment: C: Variant calling results in polyploidy data
8.2 years ago by mufernando ▴ 10
0
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0
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3.8k
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Comment: C: bwa sampe: paired ends with different names
8.3 years ago by mufernando ▴ 10
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1
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3.8k
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Comment: C: bwa sampe: paired ends with different names
updated 8.3 years ago by 147k • written 8.3 years ago by ▴ 10
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0
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2.3k
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Comment: C: Identify SNPs of selected genes in VCF file from DGRP
8.3 years ago by mufernando ▴ 10
2
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5
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2.4k
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fastq-dump error: transfer unknown
SRA fastq-dump next-gen
8.3 years ago by mufernando ▴ 10
2
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4
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3.8k
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bwa sampe: paired ends with different names
alignment next-gen bwa software error
8.3 years ago by mufernando ▴ 10
1
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2
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2.3k
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Identify SNPs of selected genes in VCF file from DGRP
gene SNP r dgrp genome
updated 2.2 years ago by 44k • written 9.2 years ago by ▴ 10
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