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38
votes
18
replies
16k
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9 follow
How to identify 16s sequences from binning data(contigs)?
genome Assembly sequence blast
updated 10 weeks ago by 20k • written 9.7 years ago by ▴ 110
0
votes
0
replies
12k
views
Comment: C: How to calculate FPKM values of interested gene
updated 5.5 years ago by 45k • written 9.4 years ago by ▴ 110
0
votes
0
replies
6.5k
views
Answer: A: How to get the abundance of genes in metagenomes from MG RAST
9.0 years ago by liuyifan2014 ▴ 110
3
votes
2
replies
5.2k
views
Should I use DNA or Protein sequence to build a HMM profile?
genome hmm gene protein DNA
updated 9.0 years ago by ▴ 20 • written 9.0 years ago by ▴ 110
1
vote
1
reply
3.8k
views
Is it necessary to increase annealing T during PCR when there are adaptors in primers?
illumina 16S PCR Tm primer
updated 9.3 years ago by ★ 2.9k • written 9.3 years ago by ▴ 110
5
votes
4
replies
3.5k
views
Is it ok to map RNA-seq reads on prokaryotic reference genome with bowtie2 ?
RNA-Seq alignment genome
updated 9.4 years ago by ★ 2.0k • written 9.4 years ago by ▴ 110
1
vote
1
reply
3.0k
views
Shall we move duplicated reads from metagenomic data?
sequencing next-gen gene PRINSEQ duplicates
9.7 years ago by liuyifan2014 ▴ 110
0
votes
0
replies
1.8k
views
Is estimated coverage of Nonpareil reliable?
software error metagenomic nonpareil coverage
9.7 years ago by liuyifan2014 ▴ 110
0
votes
1
reply
16k
views
Comment: C: How to identify 16s sequences from binning data(contigs)?
9.7 years ago by liuyifan2014 ▴ 110
0
votes
0
replies
16k
views
Comment: C: How to identify 16s sequences from binning data(contigs)?
9.7 years ago by liuyifan2014 ▴ 110
0
votes
0
replies
16k
views
Comment: C: How to identify 16s sequences from binning data(contigs)?
9.7 years ago by liuyifan2014 ▴ 110
0
votes
0
replies
1.5k
views
Looking for tools for taxonomic identification of 16s(part) using sencodary structure information?
sequence 16s secondary structure
9.7 years ago by liuyifan2014 ▴ 110
0
votes
1
reply
16k
views
Comment: C: How to identify 16s sequences from binning data(contigs)?
9.7 years ago by liuyifan2014 ▴ 110
0
votes
1
reply
16k
views
Comment: C: How to identify 16s sequences from binning data(contigs)?
9.7 years ago by liuyifan2014 ▴ 110
0
votes
0
replies
2.6k
views
How to reconstruct 16s rRNA sequences from illumina metagenomic shortgun data?
illumina 16s metagenomic
9.7 years ago by liuyifan2014 ▴ 110
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