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38
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16
replies
15k
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How to identify 16s sequences from binning data(contigs)?
genome Assembly sequence blast
updated 16 months ago by ▴ 90 • written 9.2 years ago by ▴ 110
0
votes
0
replies
12k
views
Comment: C: How to calculate FPKM values of interested gene
updated 4.9 years ago by 44k • written 8.8 years ago by ▴ 110
0
votes
0
replies
6.3k
views
Answer: A: How to get the abundance of genes in metagenomes from MG RAST
8.4 years ago by liuyifan2014 ▴ 110
3
votes
2
replies
4.8k
views
Should I use DNA or Protein sequence to build a HMM profile?
genome hmm gene protein DNA
updated 8.5 years ago by ▴ 20 • written 8.5 years ago by ▴ 110
1
vote
1
reply
3.5k
views
Is it necessary to increase annealing T during PCR when there are adaptors in primers?
illumina 16S PCR Tm primer
updated 8.7 years ago by ★ 2.9k • written 8.7 years ago by ▴ 110
5
votes
4
replies
3.2k
views
Is it ok to map RNA-seq reads on prokaryotic reference genome with bowtie2 ?
RNA-Seq alignment genome
updated 8.8 years ago by ★ 1.9k • written 8.8 years ago by ▴ 110
1
vote
1
reply
2.8k
views
Shall we move duplicated reads from metagenomic data?
sequencing next-gen gene PRINSEQ duplicates
9.1 years ago by liuyifan2014 ▴ 110
0
votes
0
replies
1.7k
views
Is estimated coverage of Nonpareil reliable?
software error metagenomic nonpareil coverage
9.1 years ago by liuyifan2014 ▴ 110
0
votes
1
reply
15k
views
Comment: C: How to identify 16s sequences from binning data(contigs)?
9.1 years ago by liuyifan2014 ▴ 110
0
votes
0
replies
15k
views
Comment: C: How to identify 16s sequences from binning data(contigs)?
9.1 years ago by liuyifan2014 ▴ 110
0
votes
0
replies
15k
views
Comment: C: How to identify 16s sequences from binning data(contigs)?
9.1 years ago by liuyifan2014 ▴ 110
0
votes
0
replies
1.4k
views
Looking for tools for taxonomic identification of 16s(part) using sencodary structure information?
sequence 16s secondary structure
9.1 years ago by liuyifan2014 ▴ 110
0
votes
1
reply
15k
views
Comment: C: How to identify 16s sequences from binning data(contigs)?
9.1 years ago by liuyifan2014 ▴ 110
0
votes
1
reply
15k
views
Comment: C: How to identify 16s sequences from binning data(contigs)?
9.1 years ago by liuyifan2014 ▴ 110
0
votes
0
replies
2.5k
views
How to reconstruct 16s rRNA sequences from illumina metagenomic shortgun data?
illumina 16s metagenomic
9.2 years ago by liuyifan2014 ▴ 110
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