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120
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Answer: Answer: Problem in count Matrix from Featurecount
1 day ago by Carlo Yague 8.9k
0
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606
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Comment: Comment: How to handle RNA seq data with unbalanced % rRNA by group?
4 weeks ago by Carlo Yague 8.9k
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0
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338
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Comment: Comment: GTF merging with gffcompare
4 weeks ago by Carlo Yague 8.9k
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1
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338
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Answer: Answer: GTF merging with gffcompare
4 weeks ago by Carlo Yague 8.9k
2
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3
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606
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Comment: Comment: How to handle RNA seq data with unbalanced % rRNA by group?
5 weeks ago by Carlo Yague 8.9k
0
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0
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368
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Comment: Comment: Confusion Regarding Tape Station Peak
3 months ago by Carlo Yague 8.9k
2
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2
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795
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Comment: Comment: Gene enrichment tools options
4 months ago by Carlo Yague 8.9k
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1
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795
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Comment: Comment: Gene enrichment tools options
4 months ago by Carlo Yague 8.9k
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1
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1.8k
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Comment: Comment: Good Bioinformatics Jokes/Puns?
4 months ago by Carlo Yague 8.9k
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574
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Comment: Comment: low Successfully assigned alignments
4 months ago by Carlo Yague 8.9k
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1
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574
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Answer: Answer: low Successfully assigned alignments
4 months ago by Carlo Yague 8.9k
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643
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Answer: Answer: Strand-specific quantification of RNA-seq data without strand-aware mapping
5 months ago by Carlo Yague 8.9k
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294
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Comment: Comment: Subset of Transcripts- How do I proceed with it?
5 months ago by Carlo Yague 8.9k
2
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0
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494
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Comment: Comment: Interpretting IGV output
7 months ago by Carlo Yague 8.9k
3
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1
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494
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Answer: Answer: Interpretting IGV output
7 months ago by Carlo Yague 8.9k
3
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1
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484
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Answer: Answer: p-value and Boneferroni adjusted p-value the same in R
7 months ago by Carlo Yague 8.9k
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1
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1.1k
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Comment: Comment: Ciriquant not configuring hisat2 indexed files
7 months ago by Carlo Yague 8.9k
1
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1
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1.1k
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Comment: Comment: Ciriquant not configuring hisat2 indexed files
7 months ago by Carlo Yague 8.9k
2
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1
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1.1k
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Answer: Answer: Ciriquant not configuring hisat2 indexed files
7 months ago by Carlo Yague 8.9k
2
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1
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947
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Answer: Answer: Weird Fragment Length distribution multiQC
8 months ago by Carlo Yague 8.9k
3
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0
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509
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Answer: Answer: How is strandedness preserved with PCR (DNA/RNA-seq)
8 months ago by Carlo Yague 8.9k
4
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2
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2.7k
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Comment: Comment: How to convert raw Nanopore R9 fast5 files to fastq files ?
8 months ago by Carlo Yague 8.9k
1
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1
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2.7k
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Answer: Answer: How to convert raw Nanopore R9 fast5 files to fastq files ?
8 months ago by Carlo Yague 8.9k
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0
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1.4k
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Comment: Comment: Cannot find summary message after Bowtie2 mapping
13 months ago by Carlo Yague 8.9k
1
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2
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1.1k
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Answer: Answer: How to find coordinates of TSS from 5pUTR and TTS from 3pUTR in transcriptome/ m
18 months ago by Carlo Yague 8.9k
1
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2
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1.4k
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Answer: Answer: feature count command error
18 months ago by Carlo Yague 8.9k
1
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0
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1.6k
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Comment: Comment: tophat2 installation error
18 months ago by Carlo Yague 8.9k
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0
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826
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Comment: Comment: RPKM normalization
18 months ago by Carlo Yague 8.9k
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0
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658
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Comment: Comment: Chip-Seq data for RNA Polymerase 1
18 months ago by Carlo Yague 8.9k
2
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1
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826
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Answer: Answer: RPKM normalization
23 days ago by Carlo Yague 8.9k
3
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1
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871
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Answer: Answer: ERCC normalization within DESeq2
18 months ago by Carlo Yague 8.9k
1
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1
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1.6k
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Answer: Answer: tophat2 installation error
18 months ago by Carlo Yague 8.9k
0
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0
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544
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Comment: Comment: Choosing a term to call my population of organisms for genetic studies
19 months ago by Carlo Yague 8.9k
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1
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1.8k
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Answer: Answer: extract gene coordinates and TSS from gene list
20 months ago by Carlo Yague 8.9k
0
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1
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657
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Answer: Answer: DESeq2 replicates in time course data
21 months ago by Carlo Yague 8.9k
0
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1
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710
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Comment: Comment: Fastq with very poor per tile quality but excellent perbase quality - is this a
2.0 years ago by Carlo Yague 8.9k
1
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1
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1.1k
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Answer: Answer: I have a question in Size-selection(SPRI) in ChIP-seq library preparation
2.2 years ago by Carlo Yague 8.9k
3
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0
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727
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Answer: Answer: bedtools
2.2 years ago by Carlo Yague 8.9k
1
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1
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910
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Answer: Answer: Problem with extracting reverse-reverse read pairs
2.3 years ago by Carlo Yague 8.9k
0
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0
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2.8k
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Answer: Answer: Supplementary alignments in BAM-file
2.4 years ago by Carlo Yague 8.9k
0
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0
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2.3k
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Comment: Comment: How to convert strand specific RNASEQ bam to bigwig
2.5 years ago by Carlo Yague 8.9k
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0
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2.5k
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Comment: Comment: Normalization of RNASeq counts with a reference gene (/genes)
2.5 years ago by Carlo Yague 8.9k
0
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0
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973
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Comment: Comment: finding coverage of bam file
2.5 years ago by Carlo Yague 8.9k
1
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2
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973
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Answer: Answer: finding coverage of bam file
2.5 years ago by Carlo Yague 8.9k
0
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1
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752
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Answer: Answer: [bash] No result file is created after hisat2
2.5 years ago by Carlo Yague 8.9k
0
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0
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595
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Comment: Comment: how to use custom genome i.e. E. Coli in epic2 ?
2.5 years ago by Carlo Yague 8.9k
1
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1
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1.9k
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Comment: Comment: How to conclude two genome sequences have the same origin?
2.5 years ago by Carlo Yague 8.9k
1
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1
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1.9k
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Answer: Answer: How to conclude two genome sequences have the same origin?
2.5 years ago by Carlo Yague 8.9k
2
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0
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622
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Answer: Answer: Is it possible to find the mutation in RNA-seq reads?
2.5 years ago by Carlo Yague 8.9k
2
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0
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3.2k
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Comment: Comment: Genes encoded on both strands of DNA?
2.6 years ago by Carlo Yague 8.9k
995 results • Page 1 of 20
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