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Get_Homologues
get_homologues homologues clusters
updated 8 months ago by ▴ 310 • written 13 months ago by ▴ 40
11
votes
4
replies
3.1k
views
Construct a gene arrow map to show the gene features
gene map Coordinates Annotation
updated 10 months ago by ▴ 90 • written 7.6 years ago by ▴ 40
0
votes
1
reply
687
views
Use a command on multiple files
bash bbtools bbduk.sh
updated 20 months ago by 44k • written 3.2 years ago by ▴ 40
0
votes
1
reply
1.4k
views
Comment: C: How to use sed command on multiple files
4.1 years ago by utkarsh.sood ▴ 40
1
vote
5
replies
1.4k
views
How to use sed command on multiple files
sed multiple files
4.1 years ago by utkarsh.sood ▴ 40
0
votes
1
reply
1.4k
views
Comment: A: How to use sed command on multiple files
4.1 years ago by utkarsh.sood ▴ 40
0
votes
1
reply
1.9k
views
Comment: C: Modify Fasta header
updated 5.0 years ago by 44k • written 9.0 years ago by ▴ 40
1
vote
2
replies
2.6k
views
List of all the sequenced Plasmid from Pseudomonas aeruginosa
sequence
updated 5.3 years ago by 20 • written 8.5 years ago by ▴ 40
1
vote
1
reply
2.2k
views
Software for Quality Check of reads
Illumina Reads Quality Check Prinseq
updated 6.5 years ago by 147k • written 6.5 years ago by ▴ 40
0
votes
0
replies
1.1k
views
Comment: C: DNA replication protein on negative strand
6.8 years ago by utkarsh.sood ▴ 40
0
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3
replies
1.1k
views
DNA replication protein on negative strand
Assembly Circular genome OriC
updated 6.8 years ago by 88k • written 6.8 years ago by ▴ 40
0
votes
1
reply
1.4k
views
Split a 6 MB genome into 6 files of 1Mb each
sequence split 1000000 nucleotide
7.0 years ago by utkarsh.sood ▴ 40
0
votes
1
reply
2.2k
views
Pipeline for performing dN/dS analysis on 5000 orthologous proteins
dN/dS orthologous protein pipeline
7.6 years ago by utkarsh.sood ▴ 40
1
vote
3
replies
7.2k
views
How to know the name of the pathways using KO numbers?
KEGG pathway
updated 7.8 years ago by ▴ 220 • written 8.4 years ago by ▴ 40
3
votes
2
replies
3.7k
views
Pathogenicity Island Detection tools
genome sequence blast
updated 3.1 years ago by 44k • written 9.0 years ago by ▴ 40
1
vote
3
replies
2.2k
views
Find genomic Islands
genome sequence
updated 3.1 years ago by 44k • written 8.9 years ago by ▴ 40
3
votes
2
replies
1.3k
views
How sense strand is deciphered after sequencing?
Sequencing SMRT Sense strand Direct strand
updated 8.3 years ago by 47k • written 8.3 years ago by ▴ 40
0
votes
1
reply
5.4k
views
How to calculate dN/dS values?
genome dN/dS PAML pal2nal
updated 8.3 years ago by 5.3k • written 8.3 years ago by ▴ 40
0
votes
0
replies
4.0k
views
Comment: C: Muliple sequence alignment for sequences in more than 4000 files
8.4 years ago by utkarsh.sood ▴ 40
0
votes
2
replies
4.0k
views
Comment: C: Muliple sequence alignment for sequences in more than 4000 files
8.4 years ago by utkarsh.sood ▴ 40
3
votes
7
replies
4.0k
views
Muliple sequence alignment for sequences in more than 4000 files
sequence orthologs clustalW
updated 8.4 years ago by ▴ 150 • written 8.4 years ago by ▴ 40
0
votes
0
replies
1.3k
views
DnaA and rpmH genes on the complement strand in a complete genomic sequence
DnaA gene Complete genome complement strand
8.4 years ago by utkarsh.sood ▴ 40
1
vote
2
replies
2.7k
views
Annotating Core and Pan genome
Core-pan genome Annotation
8.4 years ago by utkarsh.sood ▴ 40
5
votes
3
replies
4.1k
views
Remove duplicate protein sequences having different fasta identifiers
sequence alignment
updated 8.4 years ago by 5.3k • written 8.4 years ago by ▴ 40
0
votes
0
replies
1.6k
views
Unknown Sequence Type In MLST
MLST Sequence Type sequence
8.5 years ago by utkarsh.sood ▴ 40
0
votes
1
reply
1.8k
views
Comment: C: Covergent contig Warning in RAST
8.5 years ago by utkarsh.sood ▴ 40
2
votes
3
replies
1.8k
views
Covergent contig Warning in RAST
genome RAST Convergent Contig SMRT
updated 8.5 years ago by ★ 4.0k • written 8.5 years ago by ▴ 40
1
vote
2
replies
1.1k
views
Why DnaA protein is the first protein in the genebank file?
ncbi
updated 8.5 years ago by ★ 4.0k • written 8.5 years ago by ▴ 40
0
votes
0
replies
1.8k
views
Comment: C: Blastp to know the name of the protein
8.9 years ago by utkarsh.sood ▴ 40
0
votes
2
replies
1.8k
views
Blastp to know the name of the protein
genome blast
updated 2.4 years ago by 44k • written 8.9 years ago by ▴ 40
3
votes
1
reply
1.9k
views
Modify Fasta headers
sequence
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 40
1
vote
3
replies
6.9k
views
How to check whether a genome is circular
Assembly sequencing genome blast
updated 2.4 years ago by 44k • written 9.0 years ago by ▴ 40
3
votes
2
replies
3.3k
views
Genbank File generation
Assembly sequencing genome sequence SNP
updated 9.0 years ago by ▴ 140 • written 9.0 years ago by ▴ 40
6
votes
2
replies
1.5k
views
Check whether a fasta header has sequence underneath it
sequencing sequence
updated 2.4 years ago by 44k • written 9.0 years ago by ▴ 40
3
votes
3
replies
1.9k
views
Modify Fasta header
sequence fasta
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 40
0
votes
1
reply
2.7k
views
How to predict the function of hypothetical proteins
sequence blast
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 40
0
votes
1
reply
1.7k
views
Comparative Genomic Analysis
genome sequence
updated 2.3 years ago by 44k • written 9.1 years ago by ▴ 40
0
votes
3
replies
3.2k
views
Average Nucleotide Identity for 45 genomes
genome sequence alignment
updated 2.2 years ago by 44k • written 9.1 years ago by ▴ 40
0
votes
0
replies
3.2k
views
Comment: C: Average Nucleotide Identity for 45 genomes
9.1 years ago by utkarsh.sood ▴ 40
3
votes
3
replies
3.1k
views
Identify a sequence as plasmid
genome sequence
updated 2.4 years ago by 44k • written 9.1 years ago by ▴ 40
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