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416
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Absolute counts or relative abundance for BC distance matrix
metagenomics microbiome
6 months ago by mail2steff ▴ 70
1
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1
reply
507
views
Ref seq/Gene bank accession to Entrez id for cluster profiler
IDconversion NCBI ClusterProfiler Genebank
updated 15 months ago by 149k • written 15 months ago by ▴ 70
0
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0
replies
1.8k
views
Comment: Comment: How can I discover gene function on a bacterial genome
18 months ago by mail2steff ▴ 70
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0
replies
1.1k
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Comment: Comment: Very low average coverage obtained
19 months ago by mail2steff ▴ 70
1
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1
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1.1k
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Comment: Comment: Very low average coverage obtained
19 months ago by mail2steff ▴ 70
6
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4
replies
1.1k
views
Very low average coverage obtained
viral-genomes denovo-assembly spades
19 months ago by mail2steff ▴ 70
0
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0
replies
443
views
How to visualize incomplete viral genome ?
viral-genomes denovo-assembly
updated 19 months ago by 44k • written 19 months ago by ▴ 70
0
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1
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1.2k
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Comment: Comment: What could be the rage for Average Coverage after Assembly
19 months ago by mail2steff ▴ 70
0
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1
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1.2k
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Comment: Comment: What could be the rage for Average Coverage after Assembly
19 months ago by mail2steff ▴ 70
0
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1
reply
1.2k
views
Comment: Comment: What could be the rage for Average Coverage after Assembly
19 months ago by mail2steff ▴ 70
1
vote
7
replies
1.2k
views
What could be the rage for Average Coverage after Assembly
viral-genome spades coverage de-novo-assembly
updated 19 months ago by 44k • written 19 months ago by ▴ 70
3
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2
replies
967
views
Small viral contigs in denovo assembly using spades
denovo-assembly spades viral-genomes
updated 24 months ago by 44k • written 24 months ago by ▴ 70
0
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1
reply
907
views
How to download dataset with paired 16S and shotgun from HMP?
16S HMP shotgun
3.8 years ago by mail2steff ▴ 70
0
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0
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907
views
Answer: Answer: How to download dataset with paired 16S and shotgun from HMP?
3.8 years ago by mail2steff ▴ 70
0
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0
replies
1.3k
views
How do I get the alignment score from multiple alignment in MAFFT
T-coffee MAFFT multiple-alignment
updated 21 months ago by 44k • written 4.5 years ago by ▴ 70
0
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0
replies
1.8k
views
Comment: C: Generating taxa-wise unifrac distance Matrix using phyloseq
4.6 years ago by mail2steff ▴ 70
0
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1
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1.8k
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Generating taxa-wise unifrac distance Matrix using phyloseq
phyloseq R metagenomics unifrac
4.6 years ago by mail2steff ▴ 70
0
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0
replies
1.7k
views
Comment: C: How do I calculate Jaccard distance between pair-wise OTUs species
4.6 years ago by mail2steff ▴ 70
0
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1
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1.7k
views
Answer: A: How do I calculate Jaccard distance between pair-wise OTUs species
4.6 years ago by mail2steff ▴ 70
0
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4
replies
1.7k
views
How do I calculate Jaccard distance between pair-wise OTUs species
R metagenome jaccard
4.6 years ago by mail2steff ▴ 70
4
votes
4
replies
3.4k
views
How to combine two networks
network igraph cytoscape
updated 4.6 years ago by 12k • written 4.7 years ago by ▴ 70
0
votes
0
replies
951
views
How to download the barcode sequences for particular study in HMP
HMP Microbiome fastq Human Microbiome Project
5.1 years ago by mail2steff ▴ 70
0
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0
replies
766
views
Converting tab or txt file into gxl file using R programming
gxl text R programming
5.2 years ago by mail2steff ▴ 70
2
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1
reply
1.6k
views
Identification of Domains altered by alternative splicing
alternative splicing ASTA-FUNK Domain
updated 6.2 years ago by • 0 • written 7.1 years ago by ▴ 70
0
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0
replies
2.1k
views
Comment: C: Increase the kmer size in IDBA_UD?
6.8 years ago by mail2steff ▴ 70
0
votes
2
replies
2.1k
views
Increase the kmer size in IDBA_UD?
Illumina IDBA IDBA_UD kmer NGS
updated 6.8 years ago by 5.3k • written 6.8 years ago by ▴ 70
0
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0
replies
47k
views
Comment: A: Creating Interactive Volcano Plots with R and Plot.ly
6.9 years ago by mail2steff ▴ 70
0
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0
replies
2.0k
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Comment: C: Generation of Consenses Fasta from SAM/BAM
6.9 years ago by mail2steff ▴ 70
0
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0
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2.0k
views
Comment: C: Generation of Consenses Fasta from SAM/BAM
6.9 years ago by mail2steff ▴ 70
2
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4
replies
2.0k
views
Generation of Consenses Fasta from SAM/BAM
misa bam sam fasta NGS
6.9 years ago by mail2steff ▴ 70
0
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0
replies
2.7k
views
Comment: C: Bowtie Alignment with scaffold assembled reference genome
6.9 years ago by mail2steff ▴ 70
0
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0
replies
2.7k
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Comment: C: Bowtie Alignment with scaffold assembled reference genome
6.9 years ago by mail2steff ▴ 70
0
votes
3
replies
2.7k
views
Bowtie Alignment with scaffold assembled reference genome
bowtie papaya NGS alignment
6.9 years ago by mail2steff ▴ 70
0
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1
reply
2.3k
views
Comment: C: How to identify gene list present in Whole genome sequencing data?
7.0 years ago by mail2steff ▴ 70
0
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0
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2.3k
views
Comment: C: How to identify gene list present in Whole genome sequencing data?
7.0 years ago by mail2steff ▴ 70
0
votes
5
replies
2.3k
views
How to identify gene list present in Whole genome sequencing data?
whole genome sequencing samtools gene prediction
written 7.0 years ago by ▴ 70
0
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1
reply
2.5k
views
Comment: C: Err:510 in MISA tool
7.0 years ago by mail2steff ▴ 70
0
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4
replies
2.5k
views
Err:510 in MISA tool
MISA Microsatellite
7.0 years ago by mail2steff ▴ 70
0
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0
replies
3.0k
views
Comment: C: How to get the list of all genes present in sam file?
7.0 years ago by mail2steff ▴ 70
0
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2
replies
3.0k
views
Comment: C: How to get the list of all genes present in sam file?
7.0 years ago by mail2steff ▴ 70
0
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2
replies
3.0k
views
Comment: C: How to get the list of all genes present in sam file?
7.0 years ago by mail2steff ▴ 70
1
vote
11
replies
3.0k
views
How to get the list of all genes present in sam file?
next-gen sequencing WGS samtools Bowtie
7.0 years ago by mail2steff ▴ 70
0
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0
replies
1.8k
views
Comment: C: Comparing 2 Columns at once
7.0 years ago by mail2steff ▴ 70
1
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0
replies
1.8k
views
Comment: C: Comparing 2 Columns at once
7.0 years ago by mail2steff ▴ 70
0
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0
replies
1.8k
views
Comment: C: Comparing 2 Columns at once
7.0 years ago by mail2steff ▴ 70
4
votes
6
replies
1.8k
views
Comparing 2 Columns at once
R seq
updated 7.0 years ago by ▴ 380 • written 7.0 years ago by ▴ 70
0
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1
reply
1.9k
views
Comment: C: How to produce a unimodal distribution of genes expressed genes
7.1 years ago by mail2steff ▴ 70
1
vote
3
replies
1.9k
views
How to produce a unimodal distribution of genes expressed genes
cuffdiff RNA-Seq R density plot ggplot2
updated 7.1 years ago by ▴ 50 • written 7.1 years ago by ▴ 70
3
votes
6
replies
3.4k
views
How to identify and count multi-exon genes
cufflinks multi-exon
updated 7.2 years ago by 7.6k • written 7.2 years ago by ▴ 70
0
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1
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3.4k
views
Comment: C: How to identify and count multi-exon genes
7.2 years ago by mail2steff ▴ 70
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