Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
267
views
Issue with AMR gene identification using tools like CARD (RGI), abricate, Patric, ariba, amrfinderplus.
resistant-gene
updated 4 months ago by 44k • written 4 months ago by ▴ 110
0
votes
0
replies
559
views
How to sort graph based on fold change and instead of activated and suppressed, how to add up and downregulated in graph header?
clusterprofiler
20 months ago by sharmatina189059 ▴ 110
1
vote
1
reply
591
views
parse csv file
awk csv
updated 20 months ago by 44k • written 22 months ago by ▴ 110
1
vote
1
reply
714
views
Weighted coexpression network analysis
Networkanalyst RNASeq database STRING R
updated 23 months ago by 11k • written 23 months ago by ▴ 110
0
votes
1
reply
1.0k
views
Comment: Comment: bash script error to copy files from multiple directories to one directory
updated 23 months ago by 44k • written 23 months ago by ▴ 110
1
vote
1
reply
1.0k
views
Comment: Comment: bash script error to copy files from multiple directories to one directory
23 months ago by sharmatina189059 ▴ 110
4
votes
6
replies
1.0k
views
bash script error to copy files from multiple directories to one directory
bash
updated 23 months ago by 44k • written 23 months ago by ▴ 110
0
votes
3
replies
1.6k
views
How to extract multi-line protein sequences with Ids present in headers ?
PERL awk Sed
updated 2.7 years ago by ▴ 320 • written 4.7 years ago by ▴ 110
0
votes
5
replies
2.5k
views
can we retrieve protein sequences from the clusters of CD-hit?
CD-Hit protein sequences
updated 2.9 years ago by ▴ 10 • written 3.9 years ago by ▴ 110
0
votes
0
replies
549
views
how to plot genetic struture of bacterial genes?
bacteria plot gene
updated 3.3 years ago by 44k • written 3.3 years ago by ▴ 110
1
vote
0
replies
796
views
plot Roary results for oan genome analysis
R Roary
updated 17 months ago by 44k • written 3.4 years ago by ▴ 110
0
votes
0
replies
554
views
Operon Mapping
SLING operon Multigeneblast
3.5 years ago by sharmatina189059 ▴ 110
0
votes
0
replies
3.3k
views
Comment: C: Calculate Dn/Ds for nucleotide sequences using codeml, hyphy or SNAP.
3.8 years ago by sharmatina189059 ▴ 110
0
votes
1
reply
3.3k
views
Comment: C: Calculate Dn/Ds for nucleotide sequences using codeml, hyphy or SNAP.
3.8 years ago by sharmatina189059 ▴ 110
0
votes
1
reply
3.3k
views
Comment: C: Calculate Dn/Ds for nucleotide sequences using codeml, hyphy or SNAP.
3.8 years ago by sharmatina189059 ▴ 110
0
votes
6
replies
3.3k
views
Calculate Dn/Ds for nucleotide sequences using codeml, hyphy or SNAP.
Paml codeml SNAP hyphy
3.8 years ago by sharmatina189059 ▴ 110
0
votes
0
replies
619
views
codeml.txt file isnot generating.
Codeml paml dn/ds
3.8 years ago by sharmatina189059 ▴ 110
0
votes
0
replies
872
views
How to get variation data from MSA file generated using ClustalW for protein sequences?
clustalw MSA variation
updated 3.8 years ago by 20 • written 3.9 years ago by ▴ 110
6
votes
5
replies
1.5k
views
how to unique a file row-wise?
awk perl sed linux
updated 3.9 years ago by ★ 4.3k • written 3.9 years ago by ▴ 110
0
votes
0
replies
1.5k
views
Comment: C: how to unique a file row-wise?
3.9 years ago by sharmatina189059 ▴ 110
0
votes
0
replies
1.5k
views
Comment: C: how to unique a file row-wise?
3.9 years ago by sharmatina189059 ▴ 110
0
votes
2
replies
1.0k
views
How to read a multiple sequence alignment file?
Multiple-sequence-alignment
updated 18 months ago by 44k • written 3.9 years ago by ▴ 110
0
votes
1
reply
2.5k
views
Comment: C: can we retrieve protein sequences from the clusters of CD-hit?
updated 3.9 years ago by 44k • written 3.9 years ago by ▴ 110
4
votes
2
replies
1.0k
views
How Can I plot this data in a heatmap?
R Heatmap Pathways Uniprot
updated 4.0 years ago by 36k • written 4.0 years ago by ▴ 110
0
votes
0
replies
983
views
Comment: C: Mapping a draft sequence to a finished sequence using MUMmer.
4.1 years ago by sharmatina189059 ▴ 110
0
votes
0
replies
983
views
Comment: C: Mapping a draft sequence to a finished sequence using MUMmer.
4.1 years ago by sharmatina189059 ▴ 110
0
votes
4
replies
983
views
Mapping a draft sequence to a finished sequence using MUMmer.
MUMmer
4.1 years ago by sharmatina189059 ▴ 110
0
votes
0
replies
983
views
Comment: A: Mapping a draft sequence to a finished sequence using MUMmer.
4.1 years ago by sharmatina189059 ▴ 110
6
votes
10
replies
3.8k
views
Retrieve multi-line fasta sequences using list of locus tag
sequence
updated 4.2 years ago by • 0 • written 6.5 years ago by ▴ 110
0
votes
2
replies
827
views
why this code is not deleting entries from mysql table?
php mysql
updated 4.4 years ago by 20 • written 4.5 years ago by ▴ 110
0
votes
0
replies
827
views
Comment: C: why this code is not deleting entries from mysql table?
4.5 years ago by sharmatina189059 ▴ 110
0
votes
2
replies
1.1k
views
Comment: C: One gene shows alignment with core sequences as well as with accessory gene sequ
4.6 years ago by sharmatina189059 ▴ 110
2
votes
4
replies
1.1k
views
One gene shows alignment with core sequences as well as with accessory gene sequences at 50% identity?
Pan-Genome with BPGA BPGA
updated 4.6 years ago by ★ 28k • written 4.6 years ago by ▴ 110
0
votes
1
reply
746
views
Comment: C: Why blast with same query sequence shows two different query length?
4.6 years ago by sharmatina189059 ▴ 110
0
votes
3
replies
746
views
Why blast with same query sequence shows two different query length?
blast
updated 4.6 years ago by 147k • written 4.6 years ago by ▴ 110
0
votes
0
replies
1.0k
views
Comment: C: Why Genome coverage is missing for some assemblies?
4.7 years ago by sharmatina189059 ▴ 110
0
votes
1
reply
1.0k
views
Comment: C: Why Genome coverage is missing for some assemblies?
4.7 years ago by sharmatina189059 ▴ 110
0
votes
1
reply
1.0k
views
Comment: C: Why Genome coverage is missing for some assemblies?
4.7 years ago by sharmatina189059 ▴ 110
0
votes
6
replies
1.0k
views
Why Genome coverage is missing for some assemblies?
next-gen Genome coverage
updated 4.7 years ago by 3.8k • written 4.7 years ago by ▴ 110
0
votes
0
replies
928
views
Comment: C: automate command using bash or perl script?
4.9 years ago by sharmatina189059 ▴ 110
0
votes
4
replies
928
views
automate command using bash or perl script?
assembly RAST PERL BASH
updated 4.9 years ago by 13k • written 4.9 years ago by ▴ 110
0
votes
0
replies
1.0k
views
Comment: C: Setting up local blast in webserver
4.9 years ago by sharmatina189059 ▴ 110
0
votes
1
reply
1.0k
views
Comment: C: Setting up local blast in webserver
4.9 years ago by sharmatina189059 ▴ 110
0
votes
4
replies
1.0k
views
Setting up local blast in webserver
BLAST PHP and MYSQL
4.9 years ago by sharmatina189059 ▴ 110
0
votes
0
replies
2.5k
views
Comment: C: Create Dataset from reads -- IndexError: list index out of range
4.9 years ago by sharmatina189059 ▴ 110
0
votes
0
replies
2.5k
views
Comment: C: Create Dataset from reads -- IndexError: list index out of range
4.9 years ago by sharmatina189059 ▴ 110
0
votes
0
replies
2.5k
views
Comment: C: Create Dataset from reads -- IndexError: list index out of range
4.9 years ago by sharmatina189059 ▴ 110
0
votes
1
reply
1.8k
views
Pathway annotation using sequence alignment
alignment KEGG BLASTKOALA
updated 5.5 years ago by 20 • written 7.1 years ago by ▴ 110
0
votes
0
replies
1.1k
views
Pan-genome using BPGA
genome
5.5 years ago by sharmatina189059 ▴ 110
0
votes
0
replies
1.4k
views
Comment: C: Discriminating ortholog and paralogs using Cd-hit
5.8 years ago by sharmatina189059 ▴ 110
141 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6