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50
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20
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6.6k
views
18 follow
Forum:
Explain bioinformatics to a 10 year old
bioinformatics
updated 20 months ago by
Ram
44k • written 8.7 years ago by
novice
★ 1.1k
21
votes
8
replies
3.0k
views
Approaches for SV calling from De Novo assembly
SV
Assembly
updated 2.4 years ago by
Ram
44k • written 8.8 years ago by
novice
★ 1.1k
0
votes
0
replies
2.7k
views
Comment:
C: Software for finding breakpoints along the genome
updated 4.9 years ago by
Ram
44k • written 8.8 years ago by
novice
★ 1.1k
0
votes
2
replies
2.7k
views
Comment:
C: Software for finding breakpoints along the genome
updated 4.9 years ago by
Ram
44k • written 8.8 years ago by
novice
★ 1.1k
0
votes
0
replies
3.5k
views
Answer:
Answer: How to filter a fasta file?
updated 20 months ago by
Ram
44k • written 8.8 years ago by
novice
★ 1.1k
0
votes
0
replies
18k
views
Answer:
A: How to split fasta into seperate files by chromosome (in the header)
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
novice
★ 1.1k
0
votes
2
replies
2.0k
views
Is there an allternative to Affymetrix GTC for Genotyping?
genotyping
microarray
affymetrix
updated 4.9 years ago by
Giulio Genovese
▴ 570 • written 8.4 years ago by
novice
★ 1.1k
0
votes
1
reply
6.6k
views
Comment:
C: how to resolve , configure: error: Stopping here as BOOST thread lib must be ava
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
novice
★ 1.1k
0
votes
2
replies
4.5k
views
Comment:
C: Blastn without nt database
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
novice
★ 1.1k
0
votes
1
reply
4.5k
views
Comment:
C: Blastn without nt database
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
novice
★ 1.1k
0
votes
1
reply
11k
views
Comment:
C: BEDtools coverage output
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
novice
★ 1.1k
0
votes
2
replies
11k
views
Comment:
C: BEDtools coverage output
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
novice
★ 1.1k
0
votes
1
reply
2.6k
views
Comment:
C: Using the same reads to assemble mitochondria and chloroplast genomes
updated 5.0 years ago by
Ram
44k • written 8.9 years ago by
novice
★ 1.1k
0
votes
0
replies
5.2k
views
Comment:
C: Velvet: What's the relation between kmer coverage and normal coverage?
updated 5.0 years ago by
Ram
44k • written 9.0 years ago by
novice
★ 1.1k
0
votes
0
replies
3.7k
views
Comment:
C: Need Help With SyMap Building And MySQL
updated 5.0 years ago by
Ram
44k • written 9.1 years ago by
novice
★ 1.1k
0
votes
0
replies
1.3k
views
Comment:
C: Any published data with known percentage of virus sequences?
6.2 years ago by
novice
★ 1.1k
0
votes
3
replies
1.3k
views
Any published data with known percentage of virus sequences?
next-gen
metagenomics
6.2 years ago by
novice
★ 1.1k
7
votes
1
reply
7.4k
views
Answer:
A: Assembly vs scaffolding
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
novice
★ 1.1k
7
votes
0
replies
7.3k
views
Answer:
A: How to repair *all* problems identified by FastQC?
7.0 years ago by
novice
★ 1.1k
1
vote
0
replies
2.2k
views
Comment:
C: Processing FASTA files
7.4 years ago by
novice
★ 1.1k
1
vote
1
reply
3.0k
views
Structural Variation Discovery: Delly's Output
sv
delly
mapq
updated 7.4 years ago by
trausch
★ 1.9k • written 7.8 years ago by
novice
★ 1.1k
1
vote
0
replies
7.6k
views
Answer:
A: Editing header of a fasta file
7.4 years ago by
novice
★ 1.1k
0
votes
0
replies
2.6k
views
Comment:
C: Increase the fifth column ( MAPQ) value in Sam file
7.4 years ago by
novice
★ 1.1k
1
vote
2
replies
2.6k
views
Comment:
C: Increase the fifth column ( MAPQ) value in Sam file
7.4 years ago by
novice
★ 1.1k
1
vote
1
reply
2.6k
views
Answer:
A: Increase the fifth column ( MAPQ) value in Sam file
7.4 years ago by
novice
★ 1.1k
1
vote
1
reply
3.6k
views
Answer:
A: Extracting Features That Appear In TSS Regions
7.4 years ago by
novice
★ 1.1k
0
votes
1
reply
6.4k
views
Comment:
C: samtools view region
7.4 years ago by
novice
★ 1.1k
0
votes
0
replies
2.5k
views
Answer:
A: Reliable alignment tool for similar sequences of similar length other than Mumme
7.5 years ago by
novice
★ 1.1k
0
votes
0
replies
2.1k
views
How does MITObim (or MIRA's mapping mode) call bases in the consensus?
MITObim
MIRA
mapping
updated 2.3 years ago by
Ram
44k • written 8.8 years ago by
novice
★ 1.1k
0
votes
1
reply
2.2k
views
Comment:
C: R loop not functional
7.5 years ago by
novice
★ 1.1k
0
votes
0
replies
2.5k
views
Comment:
C: How to preform genome annotation?
7.5 years ago by
novice
★ 1.1k
0
votes
0
replies
2.2k
views
Comment:
C: Loop bedtools command over multiple files
7.5 years ago by
novice
★ 1.1k
1
vote
1
reply
2.5k
views
Comment:
C: How to preform genome annotation?
7.5 years ago by
novice
★ 1.1k
0
votes
2
replies
3.0k
views
Comment:
C: Adding .txt or .fa extension to UnixExecutable
7.5 years ago by
novice
★ 1.1k
3
votes
2
replies
4.4k
views
Answer:
A: Alignment time of TopHat (v.2.1.1) increases while increasing threads (using mul
7.5 years ago by
novice
★ 1.1k
0
votes
1
reply
3.0k
views
Comment:
C: Adding .txt or .fa extension to UnixExecutable
7.5 years ago by
novice
★ 1.1k
0
votes
1
reply
1.3k
views
Comment:
C: Extending the BAM index to include mate info
7.5 years ago by
novice
★ 1.1k
0
votes
3
replies
1.3k
views
Extending the BAM index to include mate info
samtools
index
7.5 years ago by
novice
★ 1.1k
8
votes
2
replies
1.9k
views
Forum:
Factors to consider when applying to computational biology PhD positions
graduate-school
academia
updated 18 months ago by
Ram
44k • written 7.5 years ago by
novice
★ 1.1k
0
votes
0
replies
2.8k
views
Comment:
C: What tools do you suggest for resolving large insertions?
7.5 years ago by
novice
★ 1.1k
0
votes
0
replies
2.8k
views
Comment:
C: What tools do you suggest for resolving large insertions?
7.5 years ago by
novice
★ 1.1k
0
votes
2
replies
2.8k
views
Comment:
C: What tools do you suggest for resolving large insertions?
7.5 years ago by
novice
★ 1.1k
2
votes
7
replies
2.8k
views
What tools do you suggest for resolving large insertions?
WGS
SV
updated 7.5 years ago by
d-cameron
★ 2.9k • written 7.5 years ago by
novice
★ 1.1k
2
votes
6
replies
8.1k
views
What does it mean to say "b-allele frequency"?
snp
canvas
updated 7.9 years ago by
jpflorido
• 0 • written 8.2 years ago by
novice
★ 1.1k
0
votes
5
replies
2.1k
views
Faster extraction of reads mapped to a region
samtools
alignment
7.9 years ago by
novice
★ 1.1k
0
votes
0
replies
2.1k
views
Comment:
C: Faster extraction of reads mapped to a region
7.9 years ago by
novice
★ 1.1k
0
votes
0
replies
2.1k
views
Comment:
C: Faster extraction of reads mapped to a region
7.9 years ago by
novice
★ 1.1k
0
votes
1
reply
23k
views
Comment:
C: Calculating Variant Allele Frequency
8.0 years ago by
novice
★ 1.1k
0
votes
1
reply
23k
views
Comment:
C: Calculating Variant Allele Frequency
8.0 years ago by
novice
★ 1.1k
9
votes
7
replies
23k
views
Calculating Variant Allele Frequency
vaf
8.0 years ago by
novice
★ 1.1k
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