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4
votes
4
replies
2.9k
views
how to Automate the Retrieval of Variant-related Information from Pubmed, dbSNP, ClinVar, HGMD etc
next-gen genome SNP
updated 2.1 years ago by 45k • written 7.1 years ago by ▴ 320
0
votes
0
replies
7.6k
views
Comment: C: Aliases for gene names from Entrez gene search
4.2 years ago by gsr9999 ▴ 320
0
votes
0
replies
738
views
Gene Symbols and Aliases/Synonyms (other gene names) in Rhesus macaque (Macaca mulatta) ???
gene assembly
4.2 years ago by gsr9999 ▴ 320
7
votes
0
replies
10k
views
Answer: A: What does numbers 5 and 7 in P5 and P7 of illumina adapters signify ?
4.4 years ago by gsr9999 ▴ 320
10
votes
3
replies
10k
views
What does numbers 5 and 7 in P5 and P7 of illumina adapters signify ?
next-gen RNA-Seq sequencing sequence rna-seq
4.4 years ago by gsr9999 ▴ 320
0
votes
0
replies
10k
views
Comment: C: What does numbers 5 and 7 in P5 and P7 of illumina adapters signify ?
4.4 years ago by gsr9999 ▴ 320
0
votes
1
reply
4.6k
views
Comment: C: How do I change size of gene names displayed on plotHeatmap from scater R Packag
5.1 years ago by gsr9999 ▴ 320
3
votes
6
replies
4.6k
views
How do I change size of gene names displayed on plotHeatmap from scater R Package
R RNA-Seq rna-seq gene next-gen
updated 5.1 years ago by ★ 18k • written 5.1 years ago by ▴ 320
0
votes
0
replies
4.6k
views
Comment: C: How do I change size of gene names displayed on plotHeatmap from scater R Packag
5.1 years ago by gsr9999 ▴ 320
0
votes
0
replies
6.3k
views
Comment: C: BWA MEM 0.7.12 Error : [gzread] <fd:4>: invalid distance code
updated 5.3 years ago by 45k • written 9.3 years ago by ▴ 320
2
votes
1
reply
4.1k
views
Single Cell RNA-Seq : Should I trim Poly-T & Clontech sequences called as "Overrepresented sequences" by FastQC ?
RNA-Seq rna-seq next-gen sequencing
updated 5.3 years ago by 150k • written 5.3 years ago by ▴ 320
6
votes
0
replies
23k
views
Answer: A: VCF file with AF(allele frequency)
updated 5.4 years ago by 45k • written 8.0 years ago by ▴ 320
0
votes
0
replies
4.8k
views
Comment: A: Small Indel Caller Of Choice
updated 5.5 years ago by 45k • written 9.4 years ago by ▴ 320
2
votes
2
replies
1.8k
views
How to preserve Sample Identity within the metadata of FASTQ, BAM and VCF files; CAP AMP 2018 Guidelines - Recommendation 10
next-gen alignment sequencing
6.5 years ago by gsr9999 ▴ 320
1
vote
0
replies
2.9k
views
Comment: C: how to Automate the Retrieval of Variant-related Information from Pubmed, dbSNP,
6.5 years ago by gsr9999 ▴ 320
0
votes
0
replies
155k
views
Comment: C: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover,
6.9 years ago by gsr9999 ▴ 320
1
vote
0
replies
11k
views
Answer: A: How to generate a .sam/.bam file of a particular chromosome or even a particular
7.0 years ago by gsr9999 ▴ 320
0
votes
0
replies
3.7k
views
Comment: C: question about API for SNPs
7.1 years ago by gsr9999 ▴ 320
0
votes
0
replies
6.9k
views
Comment: C: Searching for ClinVar entries based on SNP annotation
7.1 years ago by gsr9999 ▴ 320
0
votes
0
replies
2.7k
views
Comment: C: Can Breakdancer be applied on Paired end Exome Sequencing data for germline copy
7.1 years ago by gsr9999 ▴ 320
1
vote
3
replies
2.7k
views
Can Breakdancer be applied on Paired end Exome Sequencing data for germline copy number/sv detection?
next-gen genome
updated 7.1 years ago by ★ 2.9k • written 7.1 years ago by ▴ 320
0
votes
0
replies
2.7k
views
Answer: A: Can Breakdancer be applied on Paired end Exome Sequencing data for germline copy
7.1 years ago by gsr9999 ▴ 320
0
votes
0
replies
5.2k
views
Comment: C: Recommendations for CNV calling algorithms/programs to benchmark
7.1 years ago by gsr9999 ▴ 320
1
vote
2
replies
1.2k
views
Impact on NGS workflows - due to Vulnerabilities - Meltdown and Spectre ?
next-gen alignment software error
7.2 years ago by gsr9999 ▴ 320
0
votes
0
replies
1.2k
views
Comment: A: Impact on NGS workflows - due to Vulnerabilities - Meltdown and Spectre ?
7.2 years ago by gsr9999 ▴ 320
0
votes
0
replies
9.8k
views
Answer: A: Allele frequency of vcf file
8.0 years ago by gsr9999 ▴ 320
0
votes
0
replies
6.2k
views
Comment: C: Why Freebayes Allele frequency(AF) is 0.5 or 1.0, instead of reporting actual al
8.0 years ago by gsr9999 ▴ 320
2
votes
1
reply
6.2k
views
Answer: A: Why Freebayes Allele frequency(AF) is 0.5 or 1.0, instead of reporting actual al
8.0 years ago by gsr9999 ▴ 320
11
votes
5
replies
6.2k
views
Why Freebayes Allele frequency(AF) is 0.5 or 1.0, instead of reporting actual allele frequencies ?
next-gen
8.0 years ago by gsr9999 ▴ 320
0
votes
0
replies
6.2k
views
Comment: C: Why Freebayes Allele frequency(AF) is 0.5 or 1.0, instead of reporting actual al
8.0 years ago by gsr9999 ▴ 320
5
votes
4
replies
2.5k
views
Confusion : Why and how does a nucleotide in Reference Genome is differenet from the nucleotide in Refseq mRNA ?
Assembly genome sequence gene
updated 8.1 years ago by ★ 3.1k • written 8.1 years ago by ▴ 320
0
votes
0
replies
2.5k
views
Comment: C: Confusion : Why and how does a nucleotide in Reference Genome is differenet from
8.1 years ago by gsr9999 ▴ 320
0
votes
0
replies
9.7k
views
Answer: A: Gatk Depthofcoverage Output
8.9 years ago by gsr9999 ▴ 320
0
votes
0
replies
35k
views
Comment: C: Which Bioinformatic Friendly Pipeline Building Framework?
9.0 years ago by gsr9999 ▴ 320
5
votes
2
replies
6.3k
views
BWA MEM 0.7.12 Error : [gzread] <fd:4>: invalid distance code
bwa
updated 2.7 years ago by 45k • written 9.3 years ago by ▴ 320
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