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4
votes
4
replies
2.7k
views
how to Automate the Retrieval of Variant-related Information from Pubmed, dbSNP, ClinVar, HGMD etc
next-gen genome SNP
updated 22 months ago by 44k • written 6.8 years ago by ▴ 310
0
votes
0
replies
7.5k
views
Comment: C: Aliases for gene names from Entrez gene search
4.0 years ago by gsr9999 ▴ 310
0
votes
0
replies
709
views
Gene Symbols and Aliases/Synonyms (other gene names) in Rhesus macaque (Macaca mulatta) ???
gene assembly
4.0 years ago by gsr9999 ▴ 310
7
votes
0
replies
9.4k
views
Answer: A: What does numbers 5 and 7 in P5 and P7 of illumina adapters signify ?
4.1 years ago by gsr9999 ▴ 310
10
votes
3
replies
9.4k
views
What does numbers 5 and 7 in P5 and P7 of illumina adapters signify ?
next-gen RNA-Seq sequencing sequence rna-seq
4.1 years ago by gsr9999 ▴ 310
0
votes
0
replies
9.4k
views
Comment: C: What does numbers 5 and 7 in P5 and P7 of illumina adapters signify ?
4.1 years ago by gsr9999 ▴ 310
0
votes
1
reply
4.4k
views
Comment: C: How do I change size of gene names displayed on plotHeatmap from scater R Packag
4.9 years ago by gsr9999 ▴ 310
3
votes
6
replies
4.4k
views
How do I change size of gene names displayed on plotHeatmap from scater R Package
R RNA-Seq rna-seq gene next-gen
updated 4.9 years ago by ★ 18k • written 4.9 years ago by ▴ 310
0
votes
0
replies
4.4k
views
Comment: C: How do I change size of gene names displayed on plotHeatmap from scater R Packag
4.9 years ago by gsr9999 ▴ 310
0
votes
0
replies
6.2k
views
Comment: C: BWA MEM 0.7.12 Error : [gzread] <fd:4>: invalid distance code
updated 5.1 years ago by 44k • written 9.1 years ago by ▴ 310
2
votes
1
reply
3.9k
views
Single Cell RNA-Seq : Should I trim Poly-T & Clontech sequences called as "Overrepresented sequences" by FastQC ?
RNA-Seq rna-seq next-gen sequencing
updated 5.1 years ago by 148k • written 5.1 years ago by ▴ 310
5
votes
0
replies
22k
views
Answer: A: VCF file with AF(allele frequency)
updated 5.2 years ago by 44k • written 7.8 years ago by ▴ 310
0
votes
0
replies
4.7k
views
Comment: A: Small Indel Caller Of Choice
updated 5.2 years ago by 44k • written 9.2 years ago by ▴ 310
2
votes
2
replies
1.7k
views
How to preserve Sample Identity within the metadata of FASTQ, BAM and VCF files; CAP AMP 2018 Guidelines - Recommendation 10
next-gen alignment sequencing
6.3 years ago by gsr9999 ▴ 310
1
vote
0
replies
2.7k
views
Comment: C: how to Automate the Retrieval of Variant-related Information from Pubmed, dbSNP,
6.3 years ago by gsr9999 ▴ 310
0
votes
0
replies
153k
views
Comment: C: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover,
6.6 years ago by gsr9999 ▴ 310
1
vote
0
replies
11k
views
Answer: A: How to generate a .sam/.bam file of a particular chromosome or even a particular
6.7 years ago by gsr9999 ▴ 310
0
votes
0
replies
3.5k
views
Comment: C: question about API for SNPs
6.8 years ago by gsr9999 ▴ 310
0
votes
0
replies
6.6k
views
Comment: C: Searching for ClinVar entries based on SNP annotation
6.8 years ago by gsr9999 ▴ 310
0
votes
0
replies
2.6k
views
Comment: C: Can Breakdancer be applied on Paired end Exome Sequencing data for germline copy
6.8 years ago by gsr9999 ▴ 310
1
vote
3
replies
2.6k
views
Can Breakdancer be applied on Paired end Exome Sequencing data for germline copy number/sv detection?
next-gen genome
updated 6.8 years ago by ★ 2.9k • written 6.8 years ago by ▴ 310
0
votes
0
replies
2.6k
views
Answer: A: Can Breakdancer be applied on Paired end Exome Sequencing data for germline copy
6.8 years ago by gsr9999 ▴ 310
0
votes
0
replies
5.0k
views
Comment: C: Recommendations for CNV calling algorithms/programs to benchmark
6.8 years ago by gsr9999 ▴ 310
1
vote
2
replies
1.1k
views
Impact on NGS workflows - due to Vulnerabilities - Meltdown and Spectre ?
next-gen alignment software error
6.9 years ago by gsr9999 ▴ 310
0
votes
0
replies
1.1k
views
Comment: A: Impact on NGS workflows - due to Vulnerabilities - Meltdown and Spectre ?
6.9 years ago by gsr9999 ▴ 310
0
votes
0
replies
9.5k
views
Answer: A: Allele frequency of vcf file
7.8 years ago by gsr9999 ▴ 310
0
votes
0
replies
5.9k
views
Comment: C: Why Freebayes Allele frequency(AF) is 0.5 or 1.0, instead of reporting actual al
7.8 years ago by gsr9999 ▴ 310
2
votes
1
reply
5.9k
views
Answer: A: Why Freebayes Allele frequency(AF) is 0.5 or 1.0, instead of reporting actual al
7.8 years ago by gsr9999 ▴ 310
11
votes
5
replies
5.9k
views
Why Freebayes Allele frequency(AF) is 0.5 or 1.0, instead of reporting actual allele frequencies ?
next-gen
7.8 years ago by gsr9999 ▴ 310
0
votes
0
replies
5.9k
views
Comment: C: Why Freebayes Allele frequency(AF) is 0.5 or 1.0, instead of reporting actual al
7.8 years ago by gsr9999 ▴ 310
5
votes
4
replies
2.4k
views
Confusion : Why and how does a nucleotide in Reference Genome is differenet from the nucleotide in Refseq mRNA ?
Assembly genome sequence gene
updated 7.8 years ago by ★ 3.1k • written 7.8 years ago by ▴ 310
0
votes
0
replies
2.4k
views
Comment: C: Confusion : Why and how does a nucleotide in Reference Genome is differenet from
7.8 years ago by gsr9999 ▴ 310
0
votes
0
replies
9.5k
views
Answer: A: Gatk Depthofcoverage Output
8.6 years ago by gsr9999 ▴ 310
0
votes
0
replies
33k
views
Comment: C: Which Bioinformatic Friendly Pipeline Building Framework?
8.7 years ago by gsr9999 ▴ 310
5
votes
2
replies
6.2k
views
BWA MEM 0.7.12 Error : [gzread] <fd:4>: invalid distance code
bwa
updated 2.5 years ago by 44k • written 9.1 years ago by ▴ 310
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