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0
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0
replies
224
views
Comment:
Comment: How to use artemis comparison tool?
1 day ago by
marongiu.luigi
▴ 730
1
vote
2
replies
223
views
How to use artemis comparison tool?
artemis
ACT
comparison
genomics
updated 2 days ago by
GenoMax
148k • written 2 days ago by
marongiu.luigi
▴ 730
0
votes
0
replies
272
views
Comment:
Comment: How to compare the gene profile of two organisms (what genes are in common) usin
2 days ago by
marongiu.luigi
▴ 730
0
votes
2
replies
271
views
How to compare the gene profile of two organisms (what genes are in common) using genBank?
genes
genbank
genome
comparison
2 days ago by
marongiu.luigi
▴ 730
5
votes
12
replies
8.4k
views
how to run freebayes in multi-thread
VCF
freebayes
multi-thread
updated 12 weeks ago by
GenoMax
148k • written 5.9 years ago by
marongiu.luigi
▴ 730
0
votes
0
replies
416
views
Comment:
Comment: How to detect and visualize ORFs in bacterial genome?
8 months ago by
marongiu.luigi
▴ 730
0
votes
2
replies
416
views
How to detect and visualize ORFs in bacterial genome?
statistics
visualization
ORFs
genome
8 months ago by
marongiu.luigi
▴ 730
0
votes
0
replies
865
views
Comment:
Comment: Error in running Mauve alignner in Ubuntu 20.04
8 months ago by
marongiu.luigi
▴ 730
0
votes
0
replies
799
views
Comment:
Comment: How to assure that sequence consensus is genuine?
8 months ago by
marongiu.luigi
▴ 730
0
votes
1
reply
865
views
Comment:
Comment: Error in running Mauve alignner in Ubuntu 20.04
8 months ago by
marongiu.luigi
▴ 730
0
votes
1
reply
865
views
Comment:
Comment: Error in running Mauve alignner in Ubuntu 20.04
8 months ago by
marongiu.luigi
▴ 730
0
votes
6
replies
865
views
Error in running Mauve alignner in Ubuntu 20.04
java
linux
aligner
mauve
8 months ago by
marongiu.luigi
▴ 730
0
votes
1
reply
799
views
Comment:
Comment: How to assure that sequence consensus is genuine?
8 months ago by
marongiu.luigi
▴ 730
3
votes
3
replies
824
views
How to run BRIG on Ubuntu 22?
BRIG
Ubuntu
updated 8 months ago by
Reno
• 0 • written 11 months ago by
marongiu.luigi
▴ 730
0
votes
5
replies
799
views
How to assure that sequence consensus is genuine?
genome
8 months ago by
marongiu.luigi
▴ 730
0
votes
0
replies
264
views
How to generate a comparative map using CGview?
genome
map
CGView
9 months ago by
marongiu.luigi
▴ 730
2
votes
6
replies
1.2k
views
How to visualize multiple bacterial genomes with circos?
atlas
genome
visualization
updated 11 months ago by
mathavanbioinfo
▴ 80 • written 11 months ago by
marongiu.luigi
▴ 730
0
votes
1
reply
1.2k
views
Comment:
Comment: How to visualize multiple bacterial genomes with circos?
11 months ago by
marongiu.luigi
▴ 730
3
votes
2
replies
452
views
Alternatives to Mummer3 for linux?
alignmemt
sequences
aligner
updated 11 months ago by
Dave Carlson
★ 2.1k • written 11 months ago by
marongiu.luigi
▴ 730
0
votes
1
reply
435
views
How to annotate phage genomes?
genome
phage
annotation
updated 11 months ago by
Ram
44k • written 11 months ago by
marongiu.luigi
▴ 730
0
votes
0
replies
824
views
Comment:
Comment: How to run BRIG on Ubuntu 22?
11 months ago by
marongiu.luigi
▴ 730
0
votes
0
replies
411
views
Comment:
Comment: How to add flags to callvariants.sh?
11 months ago by
marongiu.luigi
▴ 730
0
votes
0
replies
883
views
Comment:
Comment: How to draw genome atlas on Linux?
11 months ago by
marongiu.luigi
▴ 730
0
votes
0
replies
883
views
Comment:
Comment: How to draw genome atlas on Linux?
11 months ago by
marongiu.luigi
▴ 730
1
vote
7
replies
883
views
How to draw genome atlas on Linux?
atlas
genome
visualization
11 months ago by
marongiu.luigi
▴ 730
1
vote
2
replies
411
views
How to add flags to callvariants.sh?
callvariants.sh
bbtools
11 months ago by
marongiu.luigi
▴ 730
0
votes
2
replies
697
views
How to launch MAUVE on Ubuntu 22?
mauve
ubuntu
aligner
updated 11 months ago by
brian.fristensky
▴ 460 • written 11 months ago by
marongiu.luigi
▴ 730
0
votes
0
replies
303
views
How to make block alignment graph with PROGRESSIVE-MAUVE?
mauve
ubuntu
aligner
11 months ago by
marongiu.luigi
▴ 730
0
votes
1
reply
1.4k
views
Comment:
Comment: Aligner with statistics included?
11 months ago by
marongiu.luigi
▴ 730
0
votes
1
reply
2.5k
views
Comment:
Comment: What is the correct procedure to generate a consensus bacterial sequence?
11 months ago by
marongiu.luigi
▴ 730
0
votes
2
replies
1.4k
views
Comment:
Comment: Aligner with statistics included?
14 months ago by
marongiu.luigi
▴ 730
0
votes
0
replies
1.4k
views
Comment:
Comment: Aligner with statistics included?
14 months ago by
marongiu.luigi
▴ 730
0
votes
0
replies
1.4k
views
Comment:
Comment: Aligner with statistics included?
14 months ago by
marongiu.luigi
▴ 730
5
votes
12
replies
2.5k
views
What is the correct procedure to generate a consensus bacterial sequence?
consensus
samtools
illumina
fastq
updated 11 months ago by
Brian Bushnell
20k • written 15 months ago by
marongiu.luigi
▴ 730
2
votes
9
replies
1.4k
views
Aligner with statistics included?
aligner
alignment
updated 11 months ago by
Brian Bushnell
20k • written 14 months ago by
marongiu.luigi
▴ 730
1
vote
2
replies
1.0k
views
How to properly run prokka on Ubuntu 22?
ubuntu
prokka
updated 14 months ago by
Ram
44k • written 14 months ago by
marongiu.luigi
▴ 730
0
votes
1
reply
2.5k
views
Comment:
Comment: What is the correct procedure to generate a consensus bacterial sequence?
14 months ago by
marongiu.luigi
▴ 730
1
vote
1
reply
545
views
Clustal omega does not align: Killedssive alignment output
sequence-alignment
clustal
updated 14 months ago by
Ram
44k • written 14 months ago by
marongiu.luigi
▴ 730
0
votes
2
replies
2.5k
views
Comment:
Comment: What is the correct procedure to generate a consensus bacterial sequence?
14 months ago by
marongiu.luigi
▴ 730
0
votes
1
reply
2.5k
views
Comment:
Comment: What is the correct procedure to generate a consensus bacterial sequence?
15 months ago by
marongiu.luigi
▴ 730
0
votes
1
reply
571
views
How to generate a consensus sequence from BAM file with bcftools?
bam
bcftools
consensus
updated 15 months ago by
GenoMax
148k • written 15 months ago by
marongiu.luigi
▴ 730
0
votes
0
replies
365
views
How to assemble bacterial genomes accounting for plasmids?
genome
assembly
bacteria
15 months ago by
marongiu.luigi
▴ 730
0
votes
0
replies
1.8k
views
Comment:
Comment: How reliable are WGS results?
2.3 years ago by
marongiu.luigi
▴ 730
6
votes
10
replies
1.8k
views
How reliable are WGS results?
WGS
accuracy
quality
reliability
control
2.3 years ago by
marongiu.luigi
▴ 730
2
votes
9
replies
2.8k
views
Reality check for consensus fasta generated with bcftools
reference-genome
bcftools
assembly
fasta
updated 3.0 years ago by
Ram
44k • written 3.0 years ago by
marongiu.luigi
▴ 730
0
votes
2
replies
2.8k
views
Comment:
Comment: Reality check for consensus fasta generated with bcftools
3.0 years ago by
marongiu.luigi
▴ 730
0
votes
0
replies
988
views
How to use PhageTerm?
genome
assembly
PhageTerm
phage
3.0 years ago by
marongiu.luigi
▴ 730
0
votes
1
reply
1.6k
views
Comment:
Comment: What is the procedure for the assembly of bacteriophage genomes?
3.0 years ago by
marongiu.luigi
▴ 730
0
votes
1
reply
2.8k
views
Comment:
Comment: Reality check for consensus fasta generated with bcftools
3.0 years ago by
marongiu.luigi
▴ 730
0
votes
0
replies
2.2k
views
Comment:
Comment: How to collapse de novo contigs into a single sequence?
3.0 years ago by
marongiu.luigi
▴ 730
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