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Comment: C: de novo RNA seq, combining left and right reads to create assembly
8.6 years ago by nikelle.petrillo ▴ 110
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Comment: C: de novo RNA seq, combining left and right reads to create assembly
updated 8.6 years ago by 147k • written 8.6 years ago by ▴ 110
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Comment: C: de novo RNA seq, combining left and right reads to create assembly
updated 8.6 years ago by 147k • written 8.6 years ago by ▴ 110
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3.7k
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Comment: C: de novo RNA seq, combining left and right reads to create assembly
8.6 years ago by nikelle.petrillo ▴ 110
0
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0
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3.7k
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Comment: C: de novo RNA seq, combining left and right reads to create assembly
8.6 years ago by nikelle.petrillo ▴ 110
0
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0
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3.7k
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Comment: C: de novo RNA seq, combining left and right reads to create assembly
8.6 years ago by nikelle.petrillo ▴ 110
0
votes
1
reply
3.7k
views
Comment: C: de novo RNA seq, combining left and right reads to create assembly
8.6 years ago by nikelle.petrillo ▴ 110
0
votes
1
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3.7k
views
Comment: C: de novo RNA seq, combining left and right reads to create assembly
8.6 years ago by nikelle.petrillo ▴ 110
3
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20
replies
3.7k
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de novo RNA seq, combining left and right reads to create assembly
assembly RNA-Seq trinity transcriptome
updated 8.6 years ago by 16k • written 8.6 years ago by ▴ 110
4
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3
replies
6.3k
views
Using featurecounts for EdgeR input?
edger rsubread de RNA-Seq
updated 8.6 years ago by 20 • written 8.6 years ago by ▴ 110
0
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0
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4.4k
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Comment: C: RSEM error abundance_estimates_to_matrix.pl
8.6 years ago by nikelle.petrillo ▴ 110
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0
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6.3k
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Comment: C: Using featurecounts for EdgeR input?
8.6 years ago by nikelle.petrillo ▴ 110
1
vote
3
replies
1.8k
views
de novo transcriptome assembly, read length?
RNA-Seq fastqc read-length galaxy
updated 2.3 years ago by 44k • written 8.8 years ago by ▴ 110
1
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2
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2.1k
views
Tophat Parameters for RNA seq de novo
RNA-Seq tophat
8.7 years ago by nikelle.petrillo ▴ 110
0
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1
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2.6k
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Comment: C: How to decipher FPKM Values?
8.7 years ago by nikelle.petrillo ▴ 110
0
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0
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2.6k
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Comment: C: How to decipher FPKM Values?
8.7 years ago by nikelle.petrillo ▴ 110
0
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1
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3.6k
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Comment: C: Deferentially expressed genes from FPKM values?
8.7 years ago by nikelle.petrillo ▴ 110
0
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2
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2.6k
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Comment: C: How to decipher FPKM Values?
8.7 years ago by nikelle.petrillo ▴ 110
4
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10
replies
2.6k
views
How to decipher FPKM Values?
RNA-Seq fpkm
updated 8.7 years ago by 47k • written 8.7 years ago by ▴ 110
1
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1
reply
7.8k
views
Comment: C: How to find/decipher Trimmomatic Output
8.7 years ago by nikelle.petrillo ▴ 110
4
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3
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7.8k
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How to find/decipher Trimmomatic Output
trimmomatic RNA-Seq QC
updated 7 months ago by 44k • written 8.7 years ago by ▴ 110
0
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1
reply
3.8k
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Comment: Comment: Question on Trimmomatic Defaults?
updated 2.4 years ago by 44k • written 8.8 years ago by ▴ 110
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3
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3.8k
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Question on Trimmomatic Defaults?
phred trinity rna-seq trimmomatic
updated 2.3 years ago by 44k • written 8.8 years ago by ▴ 110
5
votes
14
replies
4.6k
views
de novo transcriptome assembly work flow, paired end reads
de-novo trancscriptome rna RNA-Seq trinity
updated 2.3 years ago by 44k • written 8.8 years ago by ▴ 110
0
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1
reply
3.7k
views
Comment: C: Generating Read Length?
8.8 years ago by nikelle.petrillo ▴ 110
0
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1
reply
3.7k
views
Comment: C: Generating Read Length?
8.8 years ago by nikelle.petrillo ▴ 110
0
votes
13
replies
3.7k
views
Generating Read Length?
RNA-Seq phred-quality read-length
updated 2.3 years ago by 44k • written 8.8 years ago by ▴ 110
0
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5
replies
4.8k
views
align_and_estimate_abundance.pl ERROR/ QUESTION
aligning abundance RNA-Seq trinity
updated 2.5 years ago by 44k • written 8.8 years ago by ▴ 110
0
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1
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4.1k
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rem-synthesis-reference-transcripts : No such file or directory! RSEM-EVAL QUESTION
detonate rsem RNA-Seq rsem-eval
updated 2.5 years ago by 44k • written 8.8 years ago by ▴ 110
0
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3
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3.0k
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ERROR Running Detonate: RSEM EVAL on RNA SEQ assembly
rsem-eval rsem RNA-Seq detonate
updated 2.5 years ago by 44k • written 8.8 years ago by ▴ 110
2
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1
reply
5.8k
views
Installing Trinity, Error with Samtools
RNA-Seq samtools trinity
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 110
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