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Comment: C: Overlapping regions in a BedGraph file
updated 4.9 years ago by 44k • written 8.9 years ago by ▴ 120
0
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0
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3.6k
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Comment: Comment: Determine if a transcription factor is bound with CENTIPEDE
updated 23 months ago by 44k • written 8.9 years ago by ▴ 120
1
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0
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1.8k
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Answer: A: running an application chromosome by chromosome
updated 5.0 years ago by 44k • written 8.9 years ago by ▴ 120
4
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8
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11k
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Overlapping regions in a BedGraph file
GRO-Seq deeptools bedgraph ChIP-Seq
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 120
0
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0
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2.4k
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Comment: C: Binning BED file and counting antisense / sense reads
8.9 years ago by Sam ▴ 120
1
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2
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2.4k
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Binning BED file and counting antisense / sense reads
GRO-Seq Binning
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 120
1
vote
0
replies
2.5k
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How to obtain sense and antisense read counts from Gro-Seq data
groseq read-counts
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 120
0
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1
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4.0k
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Comment: C: Looking for ways to download ChIP-seq datasets programmatically in a pipeline
8.9 years ago by Sam ▴ 120
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0
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1.9k
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Convergent Transcription Heatmap
ChIP-Seq Net-Seq heatmaps
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 120
0
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1
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11k
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Comment: C: Overlapping regions in a BedGraph file
8.9 years ago by Sam ▴ 120
2
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2
replies
3.0k
views
Generating a strand specific heatmap of ChIP-Seq Data
ChIP-Seq heatmap deeptools
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 120
3
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0
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2.2k
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Answer: A: Extracting promoter regions alignment
8.9 years ago by Sam ▴ 120
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0
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3.2k
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Comment: C: Annotation bug using HOMER
8.9 years ago by Sam ▴ 120
0
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1
reply
9.8k
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Comment: C: HOMER find motifs from BED data
8.9 years ago by Sam ▴ 120
2
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1
reply
2.6k
views
How to generate a heatmap of a complex (three transcription factors)
ngsplot heatmap deeptools ChIP-Seq visualization
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 120
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0
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3.0k
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Comment: C: Finding only intergenic regions in a BED file
8.9 years ago by Sam ▴ 120
2
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2
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3.0k
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Finding only intergenic regions in a BED file [Answered]
intergenic ChIP-Seq bedops bedtools
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 120
0
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0
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1.4k
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Answer: Answer: comparative peak analysis
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 120
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