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replies
455
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Install PacBio lima via conda fails
conda
updated 7 weeks ago by 7.0k • written 7 weeks ago by ▴ 200
0
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0
replies
455
views
Comment: Comment: Install PacBio lima via conda fails
7 weeks ago by michael.flower.14 ▴ 200
0
votes
1
reply
486
views
Comment: Comment: Filtering reads that map to both references
6 months ago by michael.flower.14 ▴ 200
0
votes
5
replies
486
views
Filtering reads that map to both references
bwa insertion alignment reference
updated 6 months ago by ★ 1.8k • written 6 months ago by ▴ 200
1
vote
6
replies
1.2k
views
anRichment is missing
WGCNA anRichment
updated 6 months ago by 147k • written 12 months ago by ▴ 200
1
vote
1
reply
474
views
WGCNA preservation analysis
WGCNA preservation
updated 7 months ago by 55k • written 7 months ago by ▴ 200
2
votes
5
replies
1.2k
views
minimap2 gets killed, but it doesn't explain why
bowtie2
updated 9 months ago by 20k • written 9 months ago by ▴ 200
0
votes
0
replies
1.2k
views
Comment: Comment: minimap2 gets killed, but it doesn't explain why
9 months ago by michael.flower.14 ▴ 200
0
votes
1
reply
291
views
samsift can't find the AS tag to filter a bam file generated using bowtie2
samsift bowtie2
updated 6 months ago by 164k • written 9 months ago by ▴ 200
0
votes
1
reply
614
views
Comment: Comment: How do you install ExpansionHunterDenovo on a Mac?
9 months ago by michael.flower.14 ▴ 200
0
votes
3
replies
614
views
How do you install ExpansionHunterDenovo on a Mac?
ExpansionHunterDenovo
updated 9 months ago by 44k • written 9 months ago by ▴ 200
0
votes
1
reply
479
views
picard CreateSequenceDictionary errors when trying to make a .dict file
picard dict
updated 9 months ago by 7.0k • written 9 months ago by ▴ 200
0
votes
1
reply
1.8k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
9 months ago by michael.flower.14 ▴ 200
2
votes
14
replies
1.8k
views
jellyfish installed in conda, but 'command not found' when I try to run it
jellyfish conda
updated 9 months ago by 21k • written 9 months ago by ▴ 200
0
votes
0
replies
1.8k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
9 months ago by michael.flower.14 ▴ 200
0
votes
1
reply
1.8k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
9 months ago by michael.flower.14 ▴ 200
0
votes
0
replies
1.8k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
9 months ago by michael.flower.14 ▴ 200
0
votes
1
reply
1.8k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
9 months ago by michael.flower.14 ▴ 200
0
votes
1
reply
1.8k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
9 months ago by michael.flower.14 ▴ 200
0
votes
3
replies
1.9k
views
Consensus sequence calling with normalisation of indels
samtools bcftools consensus
updated 23 months ago by ★ 1.3k • written 3.0 years ago by ▴ 200
9
votes
4
replies
1.6k
views
Inverse of -log(p)
r statistics log-p
updated 23 months ago by 44k • written 2.4 years ago by ▴ 200
2
votes
2
replies
2.5k
views
Phasing using Beagle with a map file
beagle conda
updated 2.7 years ago by • 0 • written 3.0 years ago by ▴ 200
0
votes
0
replies
517
views
bcftools merged vcf file assigns all variants to one sample
vcf bcftools igv gatk
updated 17 months ago by 44k • written 2.8 years ago by ▴ 200
0
votes
0
replies
1.2k
views
Comment: Comment: gatk CombineGVCFs using argument file with spaces in the path
2.9 years ago by michael.flower.14 ▴ 200
4
votes
5
replies
1.2k
views
Get wget to download only new items from a list
wget linux
updated 2.9 years ago by 44k • written 2.9 years ago by ▴ 200
2
votes
0
replies
1.2k
views
Answer: Answer: Get wget to download only new items from a list
2.9 years ago by michael.flower.14 ▴ 200
1
vote
2
replies
1.2k
views
gatk CombineGVCFs using argument file with spaces in the path
CombineGVCFs spaces gatk
2.9 years ago by michael.flower.14 ▴ 200
10
votes
12
replies
2.6k
views
Screen processes continue to run but can't find the original screen
screen linux
updated 3.0 years ago by ★ 3.3k • written 3.0 years ago by ▴ 200
3
votes
0
replies
2.6k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
2.9 years ago by michael.flower.14 ▴ 200
10
votes
3
replies
1.1k
views
Basename the contents of a file
basename Linux
updated 2.9 years ago by 21k • written 2.9 years ago by ▴ 200
0
votes
1
reply
1.2k
views
Comment: Comment: Get wget to download only new items from a list
2.9 years ago by michael.flower.14 ▴ 200
0
votes
0
replies
3.0k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
2.9 years ago by michael.flower.14 ▴ 200
0
votes
1
reply
3.0k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
3.0 years ago by michael.flower.14 ▴ 200
0
votes
1
reply
3.0k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
3.0 years ago by michael.flower.14 ▴ 200
0
votes
1
reply
3.0k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
3.0 years ago by michael.flower.14 ▴ 200
0
votes
1
reply
3.0k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
3.0 years ago by michael.flower.14 ▴ 200
0
votes
1
reply
3.0k
views
Comment: Comment: Extract a gene region from a whole genome cram file from 1000 genomes
3.0 years ago by michael.flower.14 ▴ 200
6
votes
10
replies
3.0k
views
Extract a gene region from a whole genome cram file from 1000 genomes
samtools cram bam
2.9 years ago by michael.flower.14 ▴ 200
0
votes
2
replies
2.6k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
3.0 years ago by michael.flower.14 ▴ 200
0
votes
0
replies
2.6k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
3.0 years ago by michael.flower.14 ▴ 200
0
votes
1
reply
2.6k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
3.0 years ago by michael.flower.14 ▴ 200
0
votes
0
replies
2.6k
views
Comment: Comment: Screen processes continue to run but can't find the original screen
3.0 years ago by michael.flower.14 ▴ 200
0
votes
2
replies
2.1k
views
Installing VEP in conda
vep conda
updated 2.6 years ago by ▴ 210 • written 3.0 years ago by ▴ 200
0
votes
0
replies
5.1k
views
Comment: Comment: Combine a directory of GVCF files with gatk CombineGVCFs
3.0 years ago by michael.flower.14 ▴ 200
0
votes
1
reply
1.8k
views
Comment: Comment: gatk CombineGVCFs output contains only one column of genotypes
updated 3.0 years ago by 164k • written 3.0 years ago by ▴ 200
0
votes
0
replies
1.8k
views
Comment: Comment: gatk CombineGVCFs output contains only one column of genotypes
3.0 years ago by michael.flower.14 ▴ 200
0
votes
5
replies
1.8k
views
gatk CombineGVCFs output contains only one column of genotypes
combingvcfs gatk
updated 3.0 years ago by 164k • written 3.0 years ago by ▴ 200
0
votes
1
reply
5.1k
views
Comment: Comment: Combine a directory of GVCF files with gatk CombineGVCFs
3.0 years ago by michael.flower.14 ▴ 200
7
votes
4
replies
5.1k
views
Combine a directory of GVCF files with gatk CombineGVCFs
gatk combinegvcfs gvcf
3.0 years ago by michael.flower.14 ▴ 200
1
vote
0
replies
2.3k
views
Comment: Comment: Conda failing to install VEP
3.0 years ago by michael.flower.14 ▴ 200
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